Rorug06G0118300

RNA-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0019280
Physical Location & Seq
Forward (+)
16209728 .. 16213254
3527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0118300.1

Sequence Viewer

Length: 1593 bp
ATGGCTGACCGGAGAGCTGAGGAAAATGTCGTCTCCGGCCAACCCACCCAGAAAACCATTGCGGATTTCGATCCCGTACCCAAGCACAAGAGAAACAAGTACGCTTTAGCTTGTGCTATGTTGGCTTCCATGACTTCGATCCTACTCGGTTATGATATTGGTGTAATGAGTGGAGCGGCGATCTTCATCAAAGACGACCTCCATATCTCCGACGTGCAGGTCGAAGTTCTAGTTGGAATTCTGAATCTCTACTCCCTCATCGGATCCGCCGCCGCCGGCAGGACGTCCGACTGGATTGGACGACGGTATACCATAGTCCTCGCCGGAGCCATCTTCTTCGCCGGATCTCTTCTCATGGGCTTCGCCACCAACTACTCGTTCCTCATGTTCGGGAGATTTGTTGCTGGAATCGGCGTCGGTTATGCCCTCATGATTGCTCCTGTCTACACCGCCGAAGTTTCTCCGGCGTCGTCTCGTGGTTTCCTCACGTCTTTTGCTGATTTGTTTATCAATGTCGGAATCTTATTGGGGTACATATCCAACTGGGCCTTTTCCAAGCTCGCACTTAACCTAGGGTGGCGTTTCATGCTTGGCGTCGGCGCCATCCCCTCCGTCTTCCTTGCCATTGGCGTCTTAGCCATGCCAGAATCCCCTCGCTGGCTGGTCATGCAGGGCCGCCTCGGCGACGCCAAGCAAGTCCTCGACCGAACCTCAGACTCCATGGAAGAGTCCAAACTCCGACTCGCCGACATCAAAGAAGCCGCTGGAATCCCCGAACACTGCAACGACGACGTCGTTCAAGTCCCAAAACGCAGCCATGGCGAAGACGTCTGGAAAGGGCTCATCCTCCACCCCACCCCCGCCGTCCGTCACATTCTCATCGCCGCCGTCGGTATGCACTTCTTCCAACAAGCCTCCGGCATTGACGCCGTCGTTTTATACAGCCCGAGAATCTTCAAAAAGGCCGGAATCACGTCCAAGAACAAACTCCTCATCGCCACCATAGCCGTCGGATCCGTCAAGACAGTCTTCATCCTCGTCCCAACGTTTTTCCTGGACAGGATAGGACGTCGTCCTTTGCTTCTTTGCAGCGTAGCAGGGATGATAGCCTCACTCGGCTGTCTCGGTTTCGGCCTCACCATCATCAACCACAGCAACGAAAAGATCATGTGGGCCATTGTGCTCTGCATCACCATGGTCTTATTCTACGTCGCTTTCTTCTCCATCGGAATGGGCCCTATCACGTGGGTCTACAGCTCCGAGATCTTCCCGTTAAAGCTACGAGCTCAGGGATGTAGTATTGGAGTCGCCGTCAACAGAGTCGCGAGTGGGATAGTCTCAATGACTTTTATATCCCTGTACAAGGCCATAACTATTGGCGGAGCCTTCTTTCTTTACGCCGGAATTGCAGCGGTTGGCTGGGTGTTCTTATGTACAATGCTACCGGAGACACAGGGGAGAACCCTTGAAGATATGGAAGTCCTTTTTGGGAAGTTCCACAAGTGGAAACAGGCCAATGCTCCGGTCAAGAATAAGCAGGTGGATCATAATAGTAATGGAAATAACACCGCCAACGATGGTCGGTTCAGTTAG

Protein Analysis

530

Amino Acids

57.5

Weight (kDa)

9.24

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 39 - 496 1.1e-108 Sugar (and other) transporter
MFS_1 PF07690 45 - 445 4.2e-31 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019280)

Species Orthologous Gene IDs
malus_domestica MD01G1009800.v1.1
rosa_chinensis RchiOBHm_Chr6g0278641
rosa_laevigata RLG00000013204 RLG00000013209
rosa_multiflora Rmu_ssc0000144.1_g000015
rosa_rugosa Rorug06G0118300
rosa_samantha Rh6BG232200 Rh6CG234600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1528
AasI GACNNNNNNGTC 1 cut(s) 218
AatII GACGTC 4 cut(s) 287, 795, 831, 1072
Acc36I ACCTGC 2 cut(s) 208, 1528
AccB1I GGYRCC 1 cut(s) 599
AccBSI CCGCTC 1 cut(s) 176
AccI GTMKAC 3 cut(s) 308, 444, 1251
AccII CGCG 1 cut(s) 1325
AclI AACGTT 1 cut(s) 1046
AclWI GGATC 8 cut(s) 65, 133, 258, 271, 352, 1008, 1021, 1551
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 1 cut(s) 237
AcvI CACGTG 1 cut(s) 1245
AfaI GTAC 5 cut(s) 78, 101, 533, 1361, 1435
AfiI CCNNNNNNNGG 3 cut(s) 279, 657, 1363
AgsI TTSAA 3 cut(s) 800, 958, 1469
AjiI CACGTC 3 cut(s) 214, 489, 975
AjnI CCWGG 1 cut(s) 1053
AjuI GAANNNNNNNTTGG 6 cut(s) 216, 248, 362, 394, 1470, 1502
AluBI AGCT 6 cut(s) 17, 110, 559, 1257, 1279, 1286
AluI AGCT 6 cut(s) 17, 110, 559, 1257, 1279, 1286
Alw21I GWGCWC 2 cut(s) 1185, 1288
Alw26I GTCTC 5 cut(s) 37, 477, 1127, 1342, 1442
AlwI GGATC 8 cut(s) 65, 133, 258, 271, 352, 1008, 1021, 1551
Ama87I CYCGRG 1 cut(s) 946
AoxI GGCC 9 cut(s) 37, 546, 673, 963, 1132, 1173, 1234, 1365, 1512
ApaI GGGCCC 1 cut(s) 1238
ApeKI GCWGC 3 cut(s) 813, 1089, 1409
ApoI RAATTY 1 cut(s) 237
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 1 cut(s) 602
AspS9I GGNCC 5 cut(s) 546, 673, 1173, 1234, 1235
AsuHPI GGTGA 2 cut(s) 1129, 1183
AvaI CYCGRG 1 cut(s) 946
AvrII CCTAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 1238
BamHI GGATCC 2 cut(s) 263, 1013
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 3 cut(s) 843, 1238, 1288
BauI CACGAG 1 cut(s) 474
BbrPI CACGTG 1 cut(s) 1245
BbsI GAAGAC 3 cut(s) 607, 831, 1021
Bbv12I GWGCWC 2 cut(s) 1185, 1288
BbvCI CCTCAGC 1 cut(s) 18
BbvI GCAGC 3 cut(s) 825, 1101, 1421
BccI CCATC 5 cut(s) 338, 611, 1148, 1232, 1571
BceAI ACGGC 5 cut(s) 848, 872, 914, 992, 1295
BciT130I CCWGG 1 cut(s) 1055
BcoDI GTCTC 5 cut(s) 37, 477, 1127, 1342, 1442
BfaI CTAG 2 cut(s) 230, 572
BfmI CTRYAG 1 cut(s) 1252
BfoI RGCGCY 1 cut(s) 603
BfuAI ACCTGC 2 cut(s) 208, 1528
BglI GCCNNNNNGGC 1 cut(s) 681
BglII AGATCT 1 cut(s) 1263
BisI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1090, 1410
BlnI CCTAGG 1 cut(s) 571
BlsI GCNGC 9 cut(s) 178, 271, 274, 677, 763, 815, 886, 1091, 1411
Bme1390I CCNGG 1 cut(s) 1055
BmeT110I CYCGRG 1 cut(s) 946
BmgBI CACGTC 3 cut(s) 214, 489, 975
BmgT120I GGNCC 5 cut(s) 546, 673, 1173, 1234, 1235
BmiI GGNNCC 6 cut(s) 265, 328, 601, 1015, 1236, 1384
BmrFI CCNGG 1 cut(s) 1055
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 1 cut(s) 1197
BmuI ACTGGG 1 cut(s) 553
BpiI GAAGAC 3 cut(s) 607, 831, 1021
Bpu10I CCTNAGC 2 cut(s) 18, 1287
BsaAI YACGTR 1 cut(s) 1245
BsaBI GATNNNNATC 2 cut(s) 69, 185
BsaJI CCNNGG 5 cut(s) 571, 679, 720, 817, 1194
BsaWI WCCGGW 3 cut(s) 9, 1444, 1522
BsaXI ACNNNNNCTCC 2 cut(s) 1296, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 279, 657, 1363
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 2 cut(s) 296, 548
Bse3DI GCAATG 1 cut(s) 57
Bse8I GATNNNNATC 2 cut(s) 69, 185
BseBI CCWGG 1 cut(s) 1055
BseDI CCNNGG 5 cut(s) 571, 679, 720, 817, 1194
BseGI GGATG 5 cut(s) 603, 843, 1032, 1107, 1298
BseJI GATNNNNATC 2 cut(s) 69, 185
BseLI CCNNNNNNNGG 3 cut(s) 279, 657, 1363
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 3 cut(s) 9, 726, 1301
BseNI ACTGG 2 cut(s) 296, 548
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 1 cut(s) 1238
BseXI GCAGC 3 cut(s) 825, 1101, 1421
BseYI CCCAGC 1 cut(s) 1419
BsgI GTGCAG 1 cut(s) 236
Bsh1236I CGCG 1 cut(s) 1325
Bsh1285I CGRYCG 1 cut(s) 706
BshFI GGCC 9 cut(s) 39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BshNI GGYRCC 1 cut(s) 599
BsiEI CGRYCG 1 cut(s) 706
BsiHKAI GWGCWC 2 cut(s) 1185, 1288
BsiHKCI CYCGRG 1 cut(s) 946
BslFI GGGAC 2 cut(s) 788, 1025
BslI CCNNNNNNNGG 3 cut(s) 279, 657, 1363
BsmAI GTCTC 5 cut(s) 37, 477, 1127, 1342, 1442
BsmBI CGTCTC 2 cut(s) 37, 477
BsmFI GGGAC 2 cut(s) 788, 1025
BsnI GGCC 9 cut(s) 39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BsoBI CYCGRG 1 cut(s) 946
Bsp120I GGGCCC 1 cut(s) 1234
Bsp1286I GDGCHC 4 cut(s) 843, 1185, 1238, 1288
Bsp1407I TGTACA 2 cut(s) 1359, 1433
Bsp143I GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
Bsp19I CCATGG 3 cut(s) 720, 817, 1194
Bsp68I TCGCGA 1 cut(s) 1325
BspANI GGCC 9 cut(s) 39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BspCNI CTCAG 3 cut(s) 10, 725, 1300
BspFNI CGCG 1 cut(s) 1325
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 6 cut(s) 265, 328, 601, 1015, 1236, 1384
BspMI ACCTGC 2 cut(s) 208, 1528
BspPI GGATC 8 cut(s) 65, 133, 258, 271, 352, 1008, 1021, 1551
BspT107I GGYRCC 1 cut(s) 599
BsrBI CCGCTC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 57
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 2 cut(s) 1359, 1433
BsrI ACTGG 2 cut(s) 296, 548
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 5 cut(s) 571, 679, 720, 817, 1194
BssMI GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
BssNAI GTATAC 1 cut(s) 309
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 4 cut(s) 571, 720, 817, 1194
Bst1107I GTATAC 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 1 cut(s) 1055
Bst4CI ACNGT 2 cut(s) 306, 1027
Bst6I CTCTTC 2 cut(s) 354, 720
BstAUI TGTACA 2 cut(s) 1359, 1433
BstBAI YACGTR 1 cut(s) 1245
BstC8I GCNNGC 3 cut(s) 277, 561, 659
BstDEI CTNAG 4 cut(s) 18, 634, 712, 1287
BstDSI CCRYGG 3 cut(s) 720, 817, 1194
BstENI CCTNNNNNAGG 1 cut(s) 1361
BstF5I GGATG 5 cut(s) 603, 843, 1032, 1107, 1298
BstFNI CGCG 1 cut(s) 1325
BstH2I RGCGCY 1 cut(s) 603
BstHHI GCGC 1 cut(s) 602
BstKTI GATC 9 cut(s) 73, 141, 183, 266, 347, 1016, 1167, 1266, 1546
BstMAI GTCTC 5 cut(s) 37, 477, 1127, 1342, 1442
BstMBI GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
BstMCI CGRYCG 1 cut(s) 706
BstMWI GCNNNNNNNGC 7 cut(s) 122, 586, 667, 681, 819, 1004, 1406
BstNI CCWGG 1 cut(s) 1055
BstSCI CCNGG 1 cut(s) 1053
BstSFI CTRYAG 1 cut(s) 1252
BstSLI GKGCMC 1 cut(s) 1238
BstUI CGCG 1 cut(s) 1325
BstV1I GCAGC 3 cut(s) 825, 1101, 1421
BstV2I GAAGAC 3 cut(s) 607, 831, 1021
BstX2I RGATCY 4 cut(s) 263, 344, 1013, 1263
BstXI CCANNNNNNTGG 1 cut(s) 1231
BstYI RGATCY 4 cut(s) 263, 344, 1013, 1263
BstZ17I GTATAC 1 cut(s) 309
BsuRI GGCC 9 cut(s) 39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BtgI CCRYGG 3 cut(s) 720, 817, 1194
BtgZI GCGATG 2 cut(s) 865, 979
BtrI CACGTC 3 cut(s) 214, 489, 975
BtsCI GGATG 5 cut(s) 603, 843, 1032, 1107, 1298
BtsI GCAGTG 1 cut(s) 778
BtsIMutI CAGTG 1 cut(s) 778
BtuMI TCGCGA 1 cut(s) 1325
BveI ACCTGC 2 cut(s) 208, 1528
Cac8I GCNNGC 3 cut(s) 277, 561, 659
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 602
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 5 cut(s) 546, 673, 1173, 1234, 1235
CseI GACGC 6 cut(s) 403, 456, 583, 619, 695, 935
Csp6I GTAC 5 cut(s) 77, 100, 532, 1360, 1434
CviQI GTAC 5 cut(s) 77, 100, 532, 1360, 1434
DdeI CTNAG 4 cut(s) 18, 634, 712, 1287
DinI GGCGCC 1 cut(s) 601
DpnI GATC 9 cut(s) 72, 140, 182, 265, 346, 1015, 1166, 1265, 1545
DpnII GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 2 cut(s) 354, 720
EarI CTCTTC 2 cut(s) 354, 720
EciI GGCGGA 2 cut(s) 256, 1395
Ecl136II GAGCTC 1 cut(s) 1286
Eco130I CCWWGG 4 cut(s) 571, 720, 817, 1194
Eco24I GRGCYC 3 cut(s) 843, 1238, 1288
Eco53kI GAGCTC 1 cut(s) 1286
Eco72I CACGTG 1 cut(s) 1245
Eco88I CYCGRG 1 cut(s) 946
EcoICRI GAGCTC 1 cut(s) 1286
EcoNI CCTNNNNNAGG 1 cut(s) 1361
EcoO109I RGGNCCY 1 cut(s) 1235
EcoRI GAATTC 1 cut(s) 237
EcoRII CCWGG 1 cut(s) 1053
EcoT14I CCWWGG 4 cut(s) 571, 720, 817, 1194
EcoT38I GRGCYC 3 cut(s) 843, 1238, 1288
EgeI GGCGCC 1 cut(s) 601
EheI GGCGCC 1 cut(s) 601
ErhI CCWWGG 4 cut(s) 571, 720, 817, 1194
Esp3I CGTCTC 2 cut(s) 37, 477
FalI AAGNNNNNCTT 2 cut(s) 1013, 1045
FaqI GGGAC 2 cut(s) 788, 1025
FauI CCCGC 1 cut(s) 868
FblI GTMKAC 3 cut(s) 308, 444, 1251
Fnu4HI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1090, 1410
FokI GGATG 5 cut(s) 590, 830, 1019, 1114, 1305
FriOI GRGCYC 3 cut(s) 843, 1238, 1288
Fsp4HI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1090, 1410
FspBI CTAG 2 cut(s) 230, 572
GlaI GCGC 1 cut(s) 601
GluI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1090, 1410
GsaI CCCAGC 1 cut(s) 1423
HaeII RGCGCY 1 cut(s) 603
HaeIII GGCC 9 cut(s) 39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
HgaI GACGC 6 cut(s) 403, 456, 583, 619, 695, 935
HhaI GCGC 1 cut(s) 602
Hin6I GCGC 1 cut(s) 600
HinP1I GCGC 1 cut(s) 600
HincII GTYRAC 1 cut(s) 1315
HindII GTYRAC 1 cut(s) 1315
HphI GGTGA 2 cut(s) 1129, 1183
Hpy166II GTNNAC 4 cut(s) 309, 445, 1252, 1315
Hpy188III TCNNGA 6 cut(s) 391, 430, 832, 1021, 1324, 1528
Hpy8I GTNNAC 4 cut(s) 309, 445, 1252, 1315
HpyAV CCTTC 1 cut(s) 1396
HpyCH4III ACNGT 2 cut(s) 306, 1027
HpyCH4V TGCA 7 cut(s) 217, 670, 783, 898, 1089, 1188, 1409
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 586, 667, 681, 819, 1004, 1406
HpyF3I CTNAG 4 cut(s) 18, 634, 712, 1287
HspAI GCGC 1 cut(s) 600
KasI GGCGCC 1 cut(s) 599
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Kzo9I GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
LmnI GCTCC 6 cut(s) 173, 326, 442, 1262, 1382, 1525
Lsp1109I GCAGC 3 cut(s) 825, 1101, 1421
LweI GCATC 1 cut(s) 1197
MaeI CTAG 2 cut(s) 230, 572
MaeIII GTNAC 1 cut(s) 869
MalI GATC 9 cut(s) 72, 140, 182, 265, 346, 1015, 1166, 1265, 1545
MbiI CCGCTC 1 cut(s) 176
MboI GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
MflI RGATCY 4 cut(s) 263, 344, 1013, 1263
MhlI GDGCHC 4 cut(s) 843, 1185, 1238, 1288
MluCI AATT 2 cut(s) 237, 1404
Mly113I GGCGCC 1 cut(s) 600
MlyI GAGTC 5 cut(s) 710, 735, 737, 1314, 1329
MmeI TCCRAC 8 cut(s) 214, 234, 312, 496, 564, 763, 931, 991
MroNI GCCGGC 1 cut(s) 275
MseI TTAA 2 cut(s) 567, 1274
MslI CAYNNNNRTG 2 cut(s) 1193, 1229
MspA1I CMGCKG 2 cut(s) 764, 1412
MspR9I CCNGG 1 cut(s) 1055
MvaI CCWGG 1 cut(s) 1055
MvnI CGCG 1 cut(s) 1325
MwoI GCNNNNNNNGC 7 cut(s) 122, 586, 667, 681, 819, 1004, 1406
NaeI GCCGGC 1 cut(s) 277
NarI GGCGCC 1 cut(s) 600
NcoI CCATGG 3 cut(s) 720, 817, 1194
NdeII GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
NgoMIV GCCGGC 1 cut(s) 275
NlaIV GGNNCC 6 cut(s) 265, 328, 601, 1015, 1236, 1384
NmeAIII GCCGAG 2 cut(s) 660, 1095
NmuCI GTSAC 1 cut(s) 869
NruI TCGCGA 1 cut(s) 1325
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 1528
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 792
PdiI GCCGGC 1 cut(s) 277
PfeI GAWTC 7 cut(s) 244, 408, 519, 647, 768, 951, 969
PflFI GACNNNGTC 3 cut(s) 791, 929, 1071
PfoI TCCNGGA 1 cut(s) 1053
PkrI GCNGC 9 cut(s) 178, 271, 274, 677, 763, 815, 886, 1091, 1411
PleI GAGTC 5 cut(s) 710, 735, 736, 1313, 1328
PluTI GGCGCC 1 cut(s) 603
PmaCI CACGTG 1 cut(s) 1245
PmlI CACGTG 1 cut(s) 1245
PpsI GAGTC 5 cut(s) 710, 735, 736, 1313, 1328
Ppu21I YACGTR 1 cut(s) 1245
Psp124BI GAGCTC 1 cut(s) 1288
Psp1406I AACGTT 1 cut(s) 1046
Psp6I CCWGG 1 cut(s) 1053
PspCI CACGTG 1 cut(s) 1245
PspFI CCCAGC 1 cut(s) 1419
PspGI CCWGG 1 cut(s) 1053
PspN4I GGNNCC 6 cut(s) 265, 328, 601, 1015, 1236, 1384
PspOMI GGGCCC 1 cut(s) 1234
PspPI GGNCC 5 cut(s) 546, 673, 1173, 1234, 1235
PsuI RGATCY 4 cut(s) 263, 344, 1013, 1263
PsyI GACNNNGTC 3 cut(s) 791, 929, 1071
RruI TCGCGA 1 cut(s) 1325
RsaI GTAC 5 cut(s) 78, 101, 533, 1361, 1435
RsaNI GTAC 5 cut(s) 77, 100, 532, 1360, 1434
RseI CAYNNNNRTG 2 cut(s) 1193, 1229
SacI GAGCTC 1 cut(s) 1288
SaqAI TTAA 2 cut(s) 567, 1274
SatI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1090, 1410
Sau3AI GATC 9 cut(s) 70, 138, 180, 263, 344, 1013, 1164, 1263, 1543
Sau96I GGNCC 5 cut(s) 546, 673, 1173, 1234, 1235
SchI GAGTC 5 cut(s) 710, 735, 737, 1314, 1329
ScrFI CCNGG 1 cut(s) 1055
SduI GDGCHC 4 cut(s) 843, 1185, 1238, 1288
SfaNI GCATC 1 cut(s) 1197
SfcI CTRYAG 1 cut(s) 1252
SfoI GGCGCC 1 cut(s) 601
SmiMI CAYNNNNRTG 2 cut(s) 1193, 1229
Sse9I AATT 2 cut(s) 237, 1404
SspDI GGCGCC 1 cut(s) 599
SspMI CTAG 2 cut(s) 230, 572
SstI GAGCTC 1 cut(s) 1288
StyD4I CCNGG 1 cut(s) 1053
StyI CCWWGG 4 cut(s) 571, 720, 817, 1194
TaaI ACNGT 2 cut(s) 306, 1027
TaqI TCGA 4 cut(s) 69, 137, 222, 702
TaqII GACCGA 1 cut(s) 720
TasI AATT 2 cut(s) 237, 1404
TatI WGTACW 2 cut(s) 1359, 1433
TauI GCSGC 6 cut(s) 179, 272, 275, 678, 764, 887
TfiI GAWTC 7 cut(s) 244, 408, 519, 647, 768, 951, 969
Tru1I TTAA 2 cut(s) 567, 1274
Tru9I TTAA 2 cut(s) 567, 1274
TscAI CASTG 1 cut(s) 785
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 3 cut(s) 813, 1089, 1409
Tsp45I GTSAC 1 cut(s) 869
TspDTI ATGAA 3 cut(s) 175, 574, 1021
TspGWI ACGGA 3 cut(s) 601, 857, 1006
TspRI CASTG 1 cut(s) 785
Tth111I GACNNNGTC 3 cut(s) 791, 929, 1071
XagI CCTNNNNNAGG 1 cut(s) 1361
XapI RAATTY 1 cut(s) 237
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 3 cut(s) 308, 444, 1251
XspI CTAG 2 cut(s) 230, 572
ZraI GACGTC 4 cut(s) 285, 793, 829, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.