Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007837

Physical Location & Seq

Genomic Coordinates Forward (+)

28057651 .. 28067769

Gene Structure 10119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0177700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGCTGAGGAGGAGGAAGGTGGCGAGATCAATGGCGGAGTGGGATCCCTGGACTCCATCGAGTCTCGGTGGGTGTTTCAGGATGAGGACGAAGACTCAGAGATCGACGACGAGGACGCAGAGGAAGACGTGAGGCACCGCCGGACCGTAATGGATTCTGAGGACGATGACGAGGACGATAATGCCGAGCAGAGGTTGATTCGCACTGGGCCTCGCATCGATTCTTTCGATGTCGAAGCCCTCGAGGTCCCTGGCGCTCACCGAAATGAATATGAGGATTTCAGTCTTGGAAGGAAAATAGTAATTGCTTTCCAGACCCTTGGGGTTGTATTTGGTGATGTTGGAACCAGTCCCTTGTATACCTTCAGTGTGCTGTTTAGCAAGGCACCTATTAATGGAAATGAAGATGTTCTGGGTGCATTGTCACTAGTCCTATACACTTTAATATTAATCCCCTTGCTTAAGTATGTTCTGGTTGTTCTTTGGGCTAACGATGATGGTGAAGGTGGTACTTTTGCATTGTACTCATTGATCTGCCGACATGCTAAGGTCAGTCTTCTTCCAAATCAGCTTCCATCAGATGCCCGCATATCAAGCTTCAGGCTCAAGGTGCCATCTCCTGAACTTGAGAGATCTTTGAAAATAAAGGAAAGGCTTGAGGCTTCACTGACTCTGAAGAAGCTTCTTCTAATGTTAGTGCTTGCTGGTACTTCGATGGTGATAGCTGATGGCGTTGTTACACCAGCAATGTCAGTAGTTTCAGCTGTTGGTGGCCTAAAGATTGGAGTAGATGGAATTACGCAAGATCAAGTGATGATGATTTCAGTTGCGTTTCTTATAATCTTGTTCAGTGTACAGAAATTTGGGACAAGTAAAGTGGGACTTGCTGTAGGCCCTGCCTTATTCATATGGTTTTGTTCCCTTGGGGGTATTGGTATTTACAACATTGTTCAATATGACAGCAGTGTCTTGAGGGCCTTCAATCCTGTTCACATCTATTACTTCTTCGAGAGGAACTCAACTAAGGCCTGGTATGCTCTTGGGGGTTGTCTTCTATGCGCAACAGGTTCTGAGGCAATGTTCGCAGATCTTTGCTACTTTTCTGTGCGATCAGTCCAGCTTACATTTGTTTGCCTTGTTTTGCCCTGCCTTATGTTGGGTTATTTGGGTCAAGCCGCATACCTTATGGAGAATCCCAATGGGGCTGACCAAGCTTTCTTTTCTTCAATTCCAAGTGGTGCTTTTGCCTTTTGGCCTGTGTTCTTCATTGCTAATATTGCTGCATTGATTGCTAGTCGTGCAATGACAACAGCCACCTTTTCATGCATAAAACAATCAATGGCACTTGGTTGTTTCCCTCGTCTTAAAATCATACATACCTCCCGGAAATTTATGGGGCAGATTTATATCCCTGTTGTGAATTGGTTTTTGCTGGTGGTTTGCCTGGTGTCTATCTGCTCTATTTCAAGCATTGATGAGATTGGAAATGCATATGGTATTGCTGAGCTAGGAGTGATGATGATGACAACCATTTTAGTAACAATTGTTACGCTTCTTATATGGCAGATAAACATTATTATCGTGCTGAGTTTCATAATAATTTTCCTCGGGTTGGAATTGACATTTTTCTCATCAGTTCTCTGGAGTGTGGGAGATGGAAGTTGGATAATTTTGGTCTTTGCTGTTATCATGTTCTTCATAATGTTTATATGGAACTATGGAAGCAAGCTTAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTGATGCGGGAATTGGGTCCTAATCTTGGGACCATCAGAGCTCCAGGAATTGGCTTACTTTACAATGAGCTAGTGAAGGGTATACCAGCAATCTTTGGCCATTTTCTGACCACACTTCCTGCTGTCCACTCAATGGTCATATTTGTATGTATAAAATATGTTCCAGTTCCTGTAGTGCCTCAAAGTGAAAGGTTCCTATTCCGGCGTGTCTGCCCAAAAAGCTACCACATATTTCGTTGCATTGCCAGGTATGGCTACAAGGATGTTAGGAAGGAAAGTCACCAGACCTTTGAACAGTTACTAATTGAGAGCCTCGAGAAATTTATTCGTCGGGAAGCTCAGGAGCGGTCATTGGAGAGTGATGGGGATGATGGGGATACAGATTCGGAAGATGAGTCCTCTTGCTCAAGGGTTCTCATAGCTCCCAATGGAAGTGTCTACTCACTTGGCGTTCCTCTCCTGGCTGAGTACAAGGAGCCGAGCAAGCCAATCTCAGAAGCTAGCACATCTGAGGAGATGACGTCAGTGCCTCCTACAGATCCAGCAATTTCTGATGCTGAGCAGAGTATTGAGAGGGAACTATCTTTTATTCGCAAGGCAAAAGAATCTGGGGTTGTCTATCTTCTTGGCCATGGGGATATTAGGGCCAGAAAAGATTCCTGGTTTATTAAGAAGTTAATCATAAATTACTTCTATGCCTTCTTGAGAAAAAATTGCAGGAGGGGGATTGCAAATTTGAGCGTGCCTCATTCGCATCTAATGCAGGTTGGCATGACATATATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010065 GO:0010068 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0042335 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0048316 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

852

Amino Acids

94.74

Weight (kDa)

5.13

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	103 - 590	6.1e-145	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	605 - 850	5.1e-24	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20300
fragaria_vesca	FvH4_2g20190 FvH4_2g20190 FvH4_2g20190 FvH4_2g20190 FvH4_2g20190 FvH4_2g20190
malus_domestica	MD05G1185400.v1.1 MD10G1173600.v1.1
prunus_persica	Prupe.8G212200_v2.0.a1 Prupe.8G212200_v2.0.a1
pyrus_communis	pycom05g17020 pycom10g14970
rosa_chinensis	RchiOBHm_Chr6g0285961
rosa_laevigata	RLG00000012594
rosa_multiflora	Rmu_sc0004808.1_g000010 Rmu_sc0005513.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182570
rosa_rugosa	Rorug06G0177700
rosa_samantha	Rh6AG289800 Rh6BG291700 Rh6CG292700 Rh6DG284800
rosa_wichuraiana	Rw6G024970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	839
AasI	GACNNNNNNGTC	1 cut(s)	965
AatII	GACGTC	1 cut(s)	2294
AbsI	CCTCGAGG	1 cut(s)	242
Acc16I	TGCGCA	1 cut(s)	1060
Acc36I	ACCTGC	1 cut(s)	2524
AccB1I	GGYRCC	3 cut(s)	135, 385, 610
AccB7I	CCANNNNNTGG	2 cut(s)	1820, 1903
AccBSI	CCGCTC	1 cut(s)	2116
AccI	GTMKAC	3 cut(s)	359, 1852, 2208
AciI	CCGC	6 cut(s)	36, 139, 586, 1176, 1777, 2116
AclWI	GGATC	3 cut(s)	39, 52, 2303
AcoI	YGGCCR	2 cut(s)	1867, 2398
AcsI	RAATTY	4 cut(s)	860, 1388, 2090, 2503
AcuI	CTGAAG	4 cut(s)	349, 583, 695, 1764
AcyI	GRCGYC	1 cut(s)	2291
AfaI	GTAC	5 cut(s)	511, 524, 709, 855, 2240
AfiI	CCNNNNNNNGG	7 cut(s)	192, 395, 1156, 1612, 1796, 1820, 1903
AflII	CTTAAG	2 cut(s)	461, 1730
AgsI	TTSAA	6 cut(s)	640, 953, 982, 1227, 1467, 2063
AhlI	ACTAGT	1 cut(s)	427
AjiI	CACGTC	1 cut(s)	130
AjnI	CCWGG	8 cut(s)	48, 250, 1028, 1443, 1813, 2015, 2229, 2429
Alw21I	GWGCWC	1 cut(s)	1813
Alw26I	GTCTC	1 cut(s)	69
AlwI	GGATC	3 cut(s)	39, 52, 2303
AlwNI	CAGNNNCTG	2 cut(s)	1070, 1940
Ama87I	CYCGRG	3 cut(s)	242, 1607, 2084
AoxI	GGCC	9 cut(s)	209, 772, 892, 975, 1026, 1253, 1867, 2398, 2415
ApeKI	GCWGC	1 cut(s)	1280
ApoI	RAATTY	4 cut(s)	860, 1388, 2090, 2503
AseI	ATTAAT	2 cut(s)	393, 449
Asp700I	GAANNNNTTC	2 cut(s)	408, 2425
AspLEI	GCGC	2 cut(s)	257, 1061
AspS9I	GGNCC	8 cut(s)	144, 209, 247, 893, 975, 1787, 1800, 2415
AsuC2I	CCSGG	1 cut(s)	1384
AsuHPI	GGTGA	5 cut(s)	251, 347, 512, 730, 2042
AsuNHI	GCTAGC	1 cut(s)	2270
AvaI	CYCGRG	3 cut(s)	242, 1607, 2084
AvaII	GGWCC	4 cut(s)	144, 247, 1787, 1800
BalI	TGGCCA	2 cut(s)	1869, 2400
BamHI	GGATCC	1 cut(s)	44
BanI	GGYRCC	3 cut(s)	135, 385, 610
BanII	GRGCYC	1 cut(s)	1813
BbsI	GAAGAC	4 cut(s)	99, 132, 548, 1043
Bbv12I	GWGCWC	1 cut(s)	1813
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	1 cut(s)	1267
BciT130I	CCWGG	8 cut(s)	50, 252, 1030, 1445, 1815, 2017, 2231, 2431
BciVI	GTATCC	1 cut(s)	2140
BcnI	CCSGG	1 cut(s)	1384
BcoDI	GTCTC	1 cut(s)	69
BcuI	ACTAGT	1 cut(s)	427
BfaI	CTAG	5 cut(s)	428, 1293, 1508, 1841, 2271
BfmI	CTRYAG	3 cut(s)	888, 1941, 2304
BfoI	RGCGCY	1 cut(s)	258
BfrI	CTTAAG	2 cut(s)	461, 1730
BfuAI	ACCTGC	1 cut(s)	2524
BfuI	GTATCC	1 cut(s)	2140
BglII	AGATCT	2 cut(s)	632, 1087
BisI	GCNGC	2 cut(s)	1176, 1281
BlpI	GCTNAGC	2 cut(s)	1503, 2328
BlsI	GCNGC	2 cut(s)	1177, 1282
Bme1390I	CCNGG	9 cut(s)	50, 252, 1030, 1384, 1445, 1815, 2017, 2231, 2431
Bme18I	GGWCC	4 cut(s)	144, 247, 1787, 1800
BmeT110I	CYCGRG	3 cut(s)	242, 1607, 2084
BmgBI	CACGTC	1 cut(s)	130
BmgT120I	GGNCC	8 cut(s)	144, 209, 247, 893, 975, 1787, 1800, 2415
BmrFI	CCNGG	9 cut(s)	50, 252, 1030, 1384, 1445, 1815, 2017, 2231, 2431
BmrI	ACTGGG	1 cut(s)	216
BmsI	GCATC	5 cut(s)	225, 571, 1764, 2314, 2533
BmtI	GCTAGC	1 cut(s)	2274
BmuI	ACTGGG	1 cut(s)	216
BpiI	GAAGAC	4 cut(s)	99, 132, 548, 1043
BplI	GAGNNNNNCTC	4 cut(s)	1001, 1033, 2500, 2532
BpmI	CTGGAG	2 cut(s)	1663, 1797
Bpu10I	CCTNAGC	3 cut(s)	6, 546, 2109
Bpu1102I	GCTNAGC	2 cut(s)	1503, 2328
BpuEI	CTTGAG	6 cut(s)	590, 647, 677, 991, 2161, 2494
BpuMI	CCSGG	1 cut(s)	1384
Bsa29I	ATCGAT	1 cut(s)	219
BsaBI	GATNNNNATC	1 cut(s)	1406
BsaHI	GRCGYC	1 cut(s)	2291
BsaJI	CCNNGG	6 cut(s)	48, 250, 319, 922, 1606, 2401
BsaXI	ACNNNNNCTCC	2 cut(s)	2276, 2306
Bsc4I	CCNNNNNNNGG	7 cut(s)	192, 395, 1156, 1612, 1796, 1820, 1903
Bse1I	ACTGG	3 cut(s)	211, 348, 1934
Bse3DI	GCAATG	5 cut(s)	753, 1083, 1266, 1308, 2010
Bse8I	GATNNNNATC	1 cut(s)	1406
BseBI	CCWGG	8 cut(s)	50, 252, 1030, 1445, 1815, 2017, 2231, 2431
BseCI	ATCGAT	1 cut(s)	219
BseDI	CCNNGG	6 cut(s)	48, 250, 319, 922, 1606, 2401
BseGI	GGATG	3 cut(s)	88, 2038, 2143
BseJI	GATNNNNATC	1 cut(s)	1406
BseLI	CCNNNNNNNGG	7 cut(s)	192, 395, 1156, 1612, 1796, 1820, 1903
BseMI	GCAATG	5 cut(s)	753, 1083, 1266, 1308, 2010
BseNI	ACTGG	3 cut(s)	211, 348, 1934
BseRI	GAGGAG	3 cut(s)	23, 26, 2297
BseXI	GCAGC	1 cut(s)	1267
BshFI	GGCC	9 cut(s)	211, 774, 894, 977, 1028, 1255, 1869, 2400, 2417
BshNI	GGYRCC	3 cut(s)	135, 385, 610
BshVI	ATCGAT	1 cut(s)	219
BsiHKAI	GWGCWC	1 cut(s)	1813
BsiHKCI	CYCGRG	3 cut(s)	242, 1607, 2084
BsiSI	CCGG	3 cut(s)	142, 1384, 1972
BslFI	GGGAC	5 cut(s)	233, 336, 880, 894, 1813
BslI	CCNNNNNNNGG	7 cut(s)	192, 395, 1156, 1612, 1796, 1820, 1903
BsmAI	GTCTC	1 cut(s)	69
BsmFI	GGGAC	5 cut(s)	233, 336, 880, 894, 1813
BsnI	GGCC	9 cut(s)	211, 774, 894, 977, 1028, 1255, 1869, 2400, 2417
BsoBI	CYCGRG	3 cut(s)	242, 1607, 2084
Bsp1286I	GDGCHC	1 cut(s)	1813
Bsp1407I	TGTACA	1 cut(s)	853
Bsp143I	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
Bsp1720I	GCTNAGC	2 cut(s)	1503, 2328
Bsp19I	CCATGG	1 cut(s)	2401
BspACI	CCGC	6 cut(s)	36, 139, 586, 1176, 1777, 2116
BspANI	GGCC	9 cut(s)	211, 774, 894, 977, 1028, 1255, 1869, 2400, 2417
BspDI	ATCGAT	1 cut(s)	219
BspMI	ACCTGC	1 cut(s)	2524
BspOI	GCTAGC	1 cut(s)	2274
BspPI	GGATC	3 cut(s)	39, 52, 2303
BspT107I	GGYRCC	3 cut(s)	135, 385, 610
BspTI	CTTAAG	2 cut(s)	461, 1730
BsrBI	CCGCTC	1 cut(s)	2116
BsrDI	GCAATG	5 cut(s)	753, 1083, 1266, 1308, 2010
BsrGI	TGTACA	1 cut(s)	853
BsrI	ACTGG	3 cut(s)	211, 348, 1934
BssECI	CCNNGG	6 cut(s)	48, 250, 319, 922, 1606, 2401
BssMI	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
BssNAI	GTATAC	2 cut(s)	360, 1853
BssNI	GRCGYC	1 cut(s)	2291
BssT1I	CCWWGG	3 cut(s)	319, 922, 2401
Bst1107I	GTATAC	2 cut(s)	360, 1853
Bst2UI	CCWGG	8 cut(s)	50, 252, 1030, 1445, 1815, 2017, 2231, 2431
Bst4CI	ACNGT	2 cut(s)	148, 2067
BstACI	GRCGYC	1 cut(s)	2291
BstAFI	CTTAAG	2 cut(s)	461, 1730
BstAPI	GCANNNNNTGC	2 cut(s)	1289, 2530
BstAUI	TGTACA	1 cut(s)	853
BstC8I	GCNNGC	6 cut(s)	586, 702, 1727, 2255, 2272, 2513
BstDSI	CCRYGG	1 cut(s)	2401
BstF5I	GGATG	3 cut(s)	88, 2038, 2143
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	2 cut(s)	257, 1061
BstKTI	GATC	9 cut(s)	30, 47, 105, 534, 635, 808, 1090, 1112, 2311
BstMAI	GTCTC	1 cut(s)	69
BstMBI	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
BstNI	CCWGG	8 cut(s)	50, 252, 1030, 1445, 1815, 2017, 2231, 2431
BstNSI	RCATGY	1 cut(s)	545
BstSCI	CCNGG	9 cut(s)	48, 250, 1028, 1382, 1443, 1813, 2015, 2229, 2429
BstSFI	CTRYAG	3 cut(s)	888, 1941, 2304
BstV1I	GCAGC	1 cut(s)	1267
BstV2I	GAAGAC	4 cut(s)	99, 132, 548, 1043
BstX2I	RGATCY	4 cut(s)	44, 632, 1087, 2308
BstXI	CCANNNNNNTGG	1 cut(s)	320
BstYI	RGATCY	4 cut(s)	44, 632, 1087, 2308
BstZ17I	GTATAC	2 cut(s)	360, 1853
Bsu15I	ATCGAT	1 cut(s)	219
BsuI	GTATCC	1 cut(s)	2140
BsuRI	GGCC	9 cut(s)	211, 774, 894, 977, 1028, 1255, 1869, 2400, 2417
BsuTUI	ATCGAT	1 cut(s)	219
BtgI	CCRYGG	1 cut(s)	2401
BtrI	CACGTC	1 cut(s)	130
BtsCI	GGATG	3 cut(s)	88, 2038, 2143
BtsI	GCAGTG	1 cut(s)	970
BtsIMutI	CAGTG	6 cut(s)	204, 373, 665, 856, 970, 2301
BveI	ACCTGC	1 cut(s)	2524
Cac8I	GCNNGC	6 cut(s)	586, 702, 1727, 2255, 2272, 2513
CaiI	CAGNNNCTG	2 cut(s)	1070, 1940
CfoI	GCGC	2 cut(s)	257, 1061
Cfr13I	GGNCC	8 cut(s)	144, 209, 247, 893, 975, 1787, 1800, 2415
ClaI	ATCGAT	1 cut(s)	219
CpoI	CGGWCCG	1 cut(s)	144
CseI	GACGC	1 cut(s)	125
Csp6I	GTAC	5 cut(s)	510, 523, 708, 854, 2239
CspCI	CAANNNNNGTGG	2 cut(s)	858, 893
CspI	CGGWCCG	1 cut(s)	144
CviAII	CATG	5 cut(s)	542, 1323, 1690, 2402, 2542
CviQI	GTAC	5 cut(s)	510, 523, 708, 854, 2239
DpnI	GATC	9 cut(s)	29, 46, 104, 533, 634, 807, 1089, 1111, 2310
DpnII	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
DrdI	GACNNNNNNGTC	1 cut(s)	965
DseDI	GACNNNNNNGTC	1 cut(s)	965
EaeI	YGGCCR	2 cut(s)	1867, 2398
EciI	GGCGGA	1 cut(s)	51
Ecl136II	GAGCTC	1 cut(s)	1811
Eco130I	CCWWGG	3 cut(s)	319, 922, 2401
Eco147I	AGGCCT	1 cut(s)	1028
Eco24I	GRGCYC	1 cut(s)	1813
Eco47I	GGWCC	4 cut(s)	144, 247, 1787, 1800
Eco53kI	GAGCTC	1 cut(s)	1811
Eco57I	CTGAAG	4 cut(s)	349, 583, 695, 1764
Eco88I	CYCGRG	3 cut(s)	242, 1607, 2084
EcoICRI	GAGCTC	1 cut(s)	1811
EcoO109I	RGGNCCY	4 cut(s)	247, 893, 975, 1787
EcoRII	CCWGG	8 cut(s)	48, 250, 1028, 1443, 1813, 2015, 2229, 2429
EcoT14I	CCWWGG	3 cut(s)	319, 922, 2401
EcoT22I	ATGCAT	2 cut(s)	1328, 1492
EcoT38I	GRGCYC	1 cut(s)	1813
ErhI	CCWWGG	3 cut(s)	319, 922, 2401
FaeI	CATG	5 cut(s)	545, 1326, 1693, 2405, 2545
FalI	AAGNNNNNCTT	4 cut(s)	867, 899, 1225, 1257
FaqI	GGGAC	5 cut(s)	233, 336, 880, 894, 1813
FatI	CATG	5 cut(s)	541, 1322, 1689, 2401, 2541
FauI	CCCGC	2 cut(s)	593, 1770
FauNDI	CATATG	2 cut(s)	908, 1492
FblI	GTMKAC	3 cut(s)	359, 1852, 2208
Fnu4HI	GCNGC	2 cut(s)	1176, 1281
FokI	GGATG	3 cut(s)	95, 2045, 2150
FriOI	GRGCYC	1 cut(s)	1813
Fsp4HI	GCNGC	2 cut(s)	1176, 1281
FspBI	CTAG	5 cut(s)	428, 1293, 1508, 1841, 2271
FspI	TGCGCA	1 cut(s)	1060
GlaI	GCGC	2 cut(s)	256, 1060
GluI	GCNGC	2 cut(s)	1176, 1281
GsuI	CTGGAG	2 cut(s)	1663, 1797
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	9 cut(s)	211, 774, 894, 977, 1028, 1255, 1869, 2400, 2417
HapII	CCGG	3 cut(s)	142, 1384, 1972
HgaI	GACGC	1 cut(s)	125
HhaI	GCGC	2 cut(s)	257, 1061
Hin1I	GRCGYC	1 cut(s)	2291
Hin1II	CATG	5 cut(s)	545, 1326, 1693, 2405, 2545
Hin6I	GCGC	2 cut(s)	255, 1059
HinP1I	GCGC	2 cut(s)	255, 1059
HindIII	AAGCTT	4 cut(s)	595, 680, 1212, 1727
HpaII	CCGG	3 cut(s)	142, 1384, 1972
HphI	GGTGA	5 cut(s)	251, 347, 512, 730, 2042
Hpy166II	GTNNAC	6 cut(s)	360, 854, 991, 1853, 1897, 2209
Hpy8I	GTNNAC	6 cut(s)	360, 854, 991, 1853, 1897, 2209
Hpy99I	CGWCG	3 cut(s)	110, 113, 2103
HpyAV	CCTTC	8 cut(s)	11, 285, 373, 497, 988, 1840, 2035, 2479
HpyCH4III	ACNGT	2 cut(s)	148, 2067
HpyCH4IV	ACGT	2 cut(s)	129, 2291
HpySE526I	ACGT	2 cut(s)	129, 2291
Hsp92I	GRCGYC	1 cut(s)	2291
Hsp92II	CATG	5 cut(s)	545, 1326, 1693, 2405, 2545
HspAI	GCGC	2 cut(s)	255, 1059
Kzo9I	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
LmnI	GCTCC	4 cut(s)	1816, 2113, 2197, 2245
Lsp1109I	GCAGC	1 cut(s)	1267
LweI	GCATC	5 cut(s)	225, 571, 1764, 2314, 2533
MaeI	CTAG	5 cut(s)	428, 1293, 1508, 1841, 2271
MaeII	ACGT	2 cut(s)	129, 2291
MaeIII	GTNAC	6 cut(s)	423, 736, 1537, 1546, 2048, 2067
MalI	GATC	9 cut(s)	29, 46, 104, 533, 634, 807, 1089, 1111, 2310
MbiI	CCGCTC	1 cut(s)	2116
MboI	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
MfeI	CAATTG	1 cut(s)	1542
MflI	RGATCY	4 cut(s)	44, 632, 1087, 2308
MhlI	GDGCHC	1 cut(s)	1813
MlsI	TGGCCA	2 cut(s)	1869, 2400
MluNI	TGGCCA	2 cut(s)	1869, 2400
MlyI	GAGTC	5 cut(s)	47, 71, 89, 664, 2174
MmeI	TCCRAC	3 cut(s)	322, 1593, 1643
Mox20I	TGGCCA	2 cut(s)	1869, 2400
Mph1103I	ATGCAT	2 cut(s)	1328, 1492
MroXI	GAANNNNTTC	2 cut(s)	408, 2425
MscI	TGGCCA	2 cut(s)	1869, 2400
MseI	TTAA	8 cut(s)	393, 443, 449, 462, 1365, 1731, 2439, 2447
MslI	CAYNNNNRTG	1 cut(s)	264
Msp20I	TGGCCA	2 cut(s)	1869, 2400
MspA1I	CMGCKG	1 cut(s)	764
MspCI	CTTAAG	2 cut(s)	461, 1730
MspI	CCGG	3 cut(s)	142, 1384, 1972
MspR9I	CCNGG	9 cut(s)	50, 252, 1030, 1384, 1445, 1815, 2017, 2231, 2431
MunI	CAATTG	1 cut(s)	1542
MvaI	CCWGG	8 cut(s)	50, 252, 1030, 1445, 1815, 2017, 2231, 2431
NciI	CCSGG	1 cut(s)	1384
NcoI	CCATGG	1 cut(s)	2401
NdeI	CATATG	2 cut(s)	908, 1492
NdeII	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
NheI	GCTAGC	1 cut(s)	2270
NlaIII	CATG	5 cut(s)	545, 1326, 1693, 2405, 2545
NmeAIII	GCCGAG	2 cut(s)	211, 2274
NmuCI	GTSAC	2 cut(s)	423, 2048
NsbI	TGCGCA	1 cut(s)	1060
NsiI	ATGCAT	2 cut(s)	1328, 1492
NspI	RCATGY	1 cut(s)	545
PaeR7I	CTCGAG	2 cut(s)	242, 2084
PceI	AGGCCT	1 cut(s)	1028
PcsI	WCGNNNNNNNCGW	3 cut(s)	183, 225, 240
PdmI	GAANNNNTTC	2 cut(s)	408, 2425
PfeI	GAWTC	7 cut(s)	155, 199, 221, 1192, 2153, 2375, 2426
PflMI	CCANNNNNTGG	2 cut(s)	1820, 1903
PfoI	TCCNGGA	2 cut(s)	1382, 1813
PkrI	GCNGC	2 cut(s)	1177, 1282
PleI	GAGTC	5 cut(s)	47, 70, 89, 664, 2173
PpsI	GAGTC	5 cut(s)	47, 70, 89, 664, 2173
PpuMI	RGGWCCY	2 cut(s)	247, 1787
PshBI	ATTAAT	2 cut(s)	393, 449
PsiI	TTATAA	1 cut(s)	839
Psp124BI	GAGCTC	1 cut(s)	1813
Psp5II	RGGWCCY	2 cut(s)	247, 1787
Psp6I	CCWGG	8 cut(s)	48, 250, 1028, 1443, 1813, 2015, 2229, 2429
PspGI	CCWGG	8 cut(s)	48, 250, 1028, 1443, 1813, 2015, 2229, 2429
PspPI	GGNCC	8 cut(s)	144, 209, 247, 893, 975, 1787, 1800, 2415
PspPPI	RGGWCCY	2 cut(s)	247, 1787
PspXI	VCTCGAGB	1 cut(s)	242
PstNI	CAGNNNCTG	2 cut(s)	1070, 1940
PsuI	RGATCY	4 cut(s)	44, 632, 1087, 2308
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	511, 524, 709, 855, 2240
RsaNI	GTAC	5 cut(s)	510, 523, 708, 854, 2239
RseI	CAYNNNNRTG	1 cut(s)	264
Rsr2I	CGGWCCG	1 cut(s)	144
RsrII	CGGWCCG	1 cut(s)	144
SacI	GAGCTC	1 cut(s)	1813
SaqAI	TTAA	8 cut(s)	393, 443, 449, 462, 1365, 1731, 2439, 2447
SatI	GCNGC	2 cut(s)	1176, 1281
Sau3AI	GATC	9 cut(s)	27, 44, 102, 531, 632, 805, 1087, 1109, 2308
Sau96I	GGNCC	8 cut(s)	144, 209, 247, 893, 975, 1787, 1800, 2415
SchI	GAGTC	5 cut(s)	47, 71, 89, 664, 2174
ScrFI	CCNGG	9 cut(s)	50, 252, 1030, 1384, 1445, 1815, 2017, 2231, 2431
SduI	GDGCHC	1 cut(s)	1813
SfaNI	GCATC	5 cut(s)	225, 571, 1764, 2314, 2533
SfcI	CTRYAG	3 cut(s)	888, 1941, 2304
Sfr274I	CTCGAG	2 cut(s)	242, 2084
SinI	GGWCC	4 cut(s)	144, 247, 1787, 1800
SlaI	CTCGAG	2 cut(s)	242, 2084
SmiMI	CAYNNNNRTG	1 cut(s)	264
SpeI	ACTAGT	1 cut(s)	427
SseBI	AGGCCT	1 cut(s)	1028
SsiI	CCGC	6 cut(s)	36, 139, 586, 1176, 1777, 2116
SspI	AATATT	2 cut(s)	447, 1276
SspMI	CTAG	5 cut(s)	428, 1293, 1508, 1841, 2271
SstI	GAGCTC	1 cut(s)	1813
StuI	AGGCCT	1 cut(s)	1028
StyD4I	CCNGG	9 cut(s)	48, 250, 1028, 1382, 1443, 1813, 2015, 2229, 2429
StyI	CCWWGG	3 cut(s)	319, 922, 2401
TaaI	ACNGT	2 cut(s)	148, 2067
TaiI	ACGT	2 cut(s)	132, 2294
TaqI	TCGA	9 cut(s)	60, 105, 219, 228, 234, 243, 713, 1008, 2085
TatI	WGTACW	3 cut(s)	522, 853, 2238
TauI	GCSGC	1 cut(s)	1178
TfiI	GAWTC	7 cut(s)	155, 199, 221, 1192, 2153, 2375, 2426
Tru1I	TTAA	8 cut(s)	393, 443, 449, 462, 1365, 1731, 2439, 2447
Tru9I	TTAA	8 cut(s)	393, 443, 449, 462, 1365, 1731, 2439, 2447
TscAI	CASTG	6 cut(s)	211, 373, 672, 856, 970, 2301
TseFI	GTSAC	2 cut(s)	423, 2048
TseI	GCWGC	1 cut(s)	1280
Tsp45I	GTSAC	2 cut(s)	423, 2048
TspDTI	ATGAA	8 cut(s)	282, 417, 895, 1255, 1311, 1582, 1687, 1752
TspRI	CASTG	6 cut(s)	211, 373, 672, 856, 970, 2301
Van91I	CCANNNNNTGG	2 cut(s)	1820, 1903
Vha464I	CTTAAG	2 cut(s)	461, 1730
VpaK11BI	GGWCC	4 cut(s)	144, 247, 1787, 1800
VspI	ATTAAT	2 cut(s)	393, 449
XapI	RAATTY	4 cut(s)	860, 1388, 2090, 2503
XceI	RCATGY	1 cut(s)	545
XhoI	CTCGAG	2 cut(s)	242, 2084
XmiI	GTMKAC	3 cut(s)	359, 1852, 2208
XmnI	GAANNNNTTC	2 cut(s)	408, 2425
XspI	CTAG	5 cut(s)	428, 1293, 1508, 1841, 2271
ZraI	GACGTC	1 cut(s)	2292
Zsp2I	ATGCAT	2 cut(s)	1328, 1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.