Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006781

Physical Location & Seq

Genomic Coordinates Forward (+)

46508894 .. 46512295

Gene Structure 3402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0313900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGCAGACAGAAAACAACGGCAAAACCACCTTCGCACATATCCTATCAGCCGCTGCCATCGGCATCATCATTGCCGCGGCGGTGCATTATCGTCAACGAAAGACAAAGTATGAGAAGATCATCCCACGCTTAAGGGTCTCGGACTCCAGCCGCGTTCATAAGATTGAAAGGTTCCCTCATTATGTAGCTAGGCAGCTGGGATTTAAAGATAGAAGAGAATGTCCACACCTCTGCAAATTGGCCACCGAATACATGAGAAAATGCGACGGGTTTGAGGATGATATTTACAGTTTCTTTTCTAGTGAACCGGATGCTGATTCGCTGTTTGTGAAGCTTCTGGAGGAGTTTGAGAGATGCATCCTCAGTTATTTCGCATTTCATTGGAACGAAGCTGATCTGATGATTAGTCAGGTCTTGAGTTGTGATACTGAGCCGAGGAAGAAGCTCAAGAACATTGTCATGGCAGCGACCAGGGAACAGAGATTTGAAAGGGTGACCAAAAATTTGAAGGTGGCTAGAGTTTTCACAACGTTACTGGAGGAGATGAAAGCAATGGGACTGGCCACAGCGGATGACTCGACATGTACAGAGGTGATGGCTCCGGTGGCTCATGCTGATAGAAGTCCAGTCCTCCTCTTCATGGGAGGTGGAATGGGAGCAGGGAAGAGCACTGTGCTAAAGGACATTCTCAAAGAGCCATTCTGGGCTGGAGCAGCAGGGAATGCAGTAGTGATTGAAGCAGATGCCTTCAAAGAATCGGATGTCATATACAGAGCTCTCAGCTCCAGAGGGCATCACGACATGCTTCAAACAGCTGAACTGGTACACCAATCATCTACAGACGCAGCATCATCCCTCCTGGTCACAGCACTTAACGAAGGGCGAGATGTGATCATGGATGGCACACTCTCTTGGGTACCATTTGTTGTTCAGACTGTAACAATGGCCAGAAATGTCCACCGCCGCCGTTATCGCATGGGAGCTGGTTACAGGGTGAATGATGATGGAACTATCACTGAAAACTATTGGGAACGAATTGAAGATGAAGAACCAGAACAAGTAGAAGGGGGCAGAAAGAGAAAACCATACAGGATAGAGCTTGTTGGAGTTGTGTGTGATGCTTATCTGGCTGTTATAAGAGGAATAAGGCGAGCTATCATGTGTAGAAGAGCTGTTCGAGTAAACGCACAATTGAAATCCCACAAGAGATTTTCAGAGGCATTTAAAACATATTGCCAACTAGTTGACAATGCTAGACTGTATAGCACTAATACGTTGGAAGGACCACCTAAGTTGATAGGATGGAAAGACAAAGACAAGACCTTGCTGGTTGATCCAGATGAAATTGATTGCTTAAAAAGGGTGGCAAGTTTGAATGACAGAGCGACTTCCATATACGAACTCTACAAAAACCCTAATCCAGCTTGTCAAAAGGGATCAGTTTGGAAGGACATTGTCCTGTCACCTTCAAGGTTAAACATTCAACAGGAGCTGAAGTACTCTATCCAGAAAGTAGAAAGATTGAAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAGA_bind

Protein Analysis

510

Amino Acids

58.03

Weight (kDa)

8.92

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zeta_toxin	PF06414	204 - 307	2.4e-14	Zeta toxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42520 AT5G42520 AT5G42520
fragaria_vesca	FvH4_2g38840
malus_domestica	MD08G1016400.v1.1 MD15G1015400.v1.1
prunus_persica	Prupe.1G369400_v2.0.a1 Prupe.1G369400_v2.0.a1 Prupe.1G369400_v2.0.a1
pyrus_communis	pycom08g01420 pycom15g01310
rosa_chinensis	RchiOBHm_Chr6g0302391
rosa_laevigata	RLG00000011173
rosa_multiflora	Rmu_sc0003633.1_g000037 Rmu_sc0003633.1_g000038 Rmu_sc0040901.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165800
rosa_rugosa	Rorug06G0313800 Rorug06G0313900 Rorug06G0313900 Rorug06G0313900
rosa_samantha	Rh6AG427000 Rh6BG475700 Rh6CG439200 Rh6DG426200
rosa_wichuraiana	Rw6G036940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1136
Acc65I	GGTACC	1 cut(s)	916
AccB1I	GGYRCC	1 cut(s)	916
AccII	CGCG	2 cut(s)	77, 153
AciI	CCGC	8 cut(s)	51, 75, 77, 80, 151, 569, 961, 964
AclI	AACGTT	1 cut(s)	530
AclWI	GGATC	2 cut(s)	1328, 1444
AcoI	YGGCCR	3 cut(s)	240, 561, 945
AcsI	RAATTY	1 cut(s)	502
AcuI	CTGAAG	1 cut(s)	1514
AfaI	GTAC	4 cut(s)	586, 825, 918, 1499
AfiI	CCNNNNNNNGG	1 cut(s)	640
AflII	CTTAAG	1 cut(s)	130
AflIII	ACRYGT	1 cut(s)	581
AhlI	ACTAGT	1 cut(s)	1240
AjnI	CCWGG	2 cut(s)	470, 858
Alw21I	GWGCWC	2 cut(s)	671, 778
Alw26I	GTCTC	1 cut(s)	142
AlwI	GGATC	2 cut(s)	1328, 1444
AlwNI	CAGNNNCTG	2 cut(s)	53, 1492
AoxI	GGCC	3 cut(s)	240, 561, 945
ApeKI	GCWGC	5 cut(s)	53, 193, 464, 713, 845
ApoI	RAATTY	1 cut(s)	502
ArsI	GACNNNNNNTTYG	2 cut(s)	487, 519
Asp718I	GGTACC	1 cut(s)	916
AspS9I	GGNCC	1 cut(s)	1283
AsuHPI	GGTGA	4 cut(s)	505, 604, 1006, 1455
AvaII	GGWCC	1 cut(s)	1283
BalI	TGGCCA	3 cut(s)	242, 563, 947
BanI	GGYRCC	1 cut(s)	916
BanII	GRGCYC	1 cut(s)	778
Bbv12I	GWGCWC	2 cut(s)	671, 778
BbvI	GCAGC	5 cut(s)	40, 205, 476, 725, 857
BccI	CCATC	5 cut(s)	65, 589, 893, 998, 1296
BceAI	ACGGC	2 cut(s)	34, 951
BciT130I	CCWGG	2 cut(s)	472, 860
BclI	TGATCA	1 cut(s)	891
BcoDI	GTCTC	1 cut(s)	142
BcuI	ACTAGT	1 cut(s)	1240
BfaI	CTAG	5 cut(s)	189, 300, 516, 1241, 1254
BfmI	CTRYAG	1 cut(s)	837
BfrI	CTTAAG	1 cut(s)	130
BmcAI	AGTACT	1 cut(s)	1499
Bme1390I	CCNGG	2 cut(s)	472, 860
Bme18I	GGWCC	1 cut(s)	1283
BmgT120I	GGNCC	1 cut(s)	1283
BmiI	GGNNCC	3 cut(s)	173, 600, 918
BmrFI	CCNGG	2 cut(s)	472, 860
BmsI	GCATC	8 cut(s)	72, 301, 344, 366, 733, 802, 857, 1108
BpmI	CTGGAG	5 cut(s)	130, 359, 557, 729, 769
BpuEI	CTTGAG	2 cut(s)	431, 436
BsaBI	GATNNNNATC	1 cut(s)	1122
BsaI	GGTCTC	1 cut(s)	142
BsaJI	CCNNGG	3 cut(s)	75, 434, 471
BsaWI	WCCGGW	2 cut(s)	307, 601
BsaXI	ACNNNNNCTCC	2 cut(s)	1481, 1511
Bsc4I	CCNNNNNNNGG	1 cut(s)	640
Bse1I	ACTGG	4 cut(s)	540, 564, 626, 825
Bse3DI	GCAATG	2 cut(s)	69, 558
Bse8I	GATNNNNATC	1 cut(s)	1122
BseBI	CCWGG	2 cut(s)	472, 860
BseDI	CCNNGG	3 cut(s)	75, 434, 471
BseGI	GGATG	9 cut(s)	120, 283, 316, 357, 577, 766, 851, 904, 1307
BseJI	GATNNNNATC	1 cut(s)	1122
BseLI	CCNNNNNNNGG	1 cut(s)	640
BseMI	GCAATG	2 cut(s)	69, 558
BseMII	CTCAG	3 cut(s)	376, 420, 793
BseNI	ACTGG	4 cut(s)	540, 564, 626, 825
BseRI	GAGGAG	3 cut(s)	356, 554, 623
BseXI	GCAGC	5 cut(s)	40, 205, 476, 725, 857
BseYI	CCCAGC	1 cut(s)	196
Bsh1236I	CGCG	2 cut(s)	77, 153
BshFI	GGCC	3 cut(s)	242, 563, 947
BshNI	GGYRCC	1 cut(s)	916
BsiHKAI	GWGCWC	2 cut(s)	671, 778
BsiSI	CCGG	2 cut(s)	308, 602
BslFI	GGGAC	1 cut(s)	570
BslI	CCNNNNNNNGG	1 cut(s)	640
BsmAI	GTCTC	1 cut(s)	142
BsmFI	GGGAC	1 cut(s)	570
BsmI	GAATGC	1 cut(s)	727
BsnI	GGCC	3 cut(s)	242, 563, 947
Bso31I	GGTCTC	1 cut(s)	142
Bsp1286I	GDGCHC	2 cut(s)	671, 778
Bsp1407I	TGTACA	1 cut(s)	584
Bsp143I	GATC	5 cut(s)	117, 394, 891, 1333, 1436
BspACI	CCGC	8 cut(s)	51, 75, 77, 80, 151, 569, 961, 964
BspANI	GGCC	3 cut(s)	242, 563, 947
BspCNI	CTCAG	3 cut(s)	375, 421, 792
BspFNI	CGCG	2 cut(s)	77, 153
BspLI	GGNNCC	3 cut(s)	173, 600, 918
BspPI	GGATC	2 cut(s)	1328, 1444
BspQI	GCTCTTC	2 cut(s)	659, 1162
BspT107I	GGYRCC	1 cut(s)	916
BspTI	CTTAAG	1 cut(s)	130
BspTNI	GGTCTC	1 cut(s)	142
BsrDI	GCAATG	2 cut(s)	69, 558
BsrGI	TGTACA	1 cut(s)	584
BsrI	ACTGG	4 cut(s)	540, 564, 626, 825
BssECI	CCNNGG	3 cut(s)	75, 434, 471
BssMI	GATC	5 cut(s)	117, 394, 891, 1333, 1436
Bst2UI	CCWGG	2 cut(s)	472, 860
Bst4CI	ACNGT	4 cut(s)	290, 673, 937, 1260
Bst6I	CTCTTC	4 cut(s)	208, 641, 659, 1162
BstAFI	CTTAAG	1 cut(s)	130
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstAUI	TGTACA	1 cut(s)	584
BstC8I	GCNNGC	1 cut(s)	1152
BstDEI	CTNAG	4 cut(s)	362, 429, 779, 1290
BstDSI	CCRYGG	1 cut(s)	75
BstEII	GGTNACC	1 cut(s)	493
BstF5I	GGATG	9 cut(s)	120, 283, 316, 357, 577, 766, 851, 904, 1307
BstFNI	CGCG	2 cut(s)	77, 153
BstKTI	GATC	5 cut(s)	120, 397, 894, 1336, 1439
BstMAI	GTCTC	1 cut(s)	142
BstMBI	GATC	5 cut(s)	117, 394, 891, 1333, 1436
BstMWI	GCNNNNNNNGC	5 cut(s)	605, 713, 722, 972, 1127
BstNI	CCWGG	2 cut(s)	472, 860
BstNSI	RCATGY	2 cut(s)	585, 805
BstPI	GGTNACC	1 cut(s)	493
BstSCI	CCNGG	2 cut(s)	470, 858
BstSFI	CTRYAG	1 cut(s)	837
BstUI	CGCG	2 cut(s)	77, 153
BstV1I	GCAGC	5 cut(s)	40, 205, 476, 725, 857
BsuRI	GGCC	3 cut(s)	242, 563, 947
BtgI	CCRYGG	1 cut(s)	75
BtsCI	GGATG	9 cut(s)	120, 283, 316, 357, 577, 766, 851, 904, 1307
BtsIMutI	CAGTG	2 cut(s)	669, 1014
Cac8I	GCNNGC	1 cut(s)	1152
CaiI	CAGNNNCTG	2 cut(s)	53, 1492
Cfr13I	GGNCC	1 cut(s)	1283
Cfr42I	CCGCGG	1 cut(s)	78
CseI	GACGC	1 cut(s)	851
Csp6I	GTAC	4 cut(s)	585, 824, 917, 1498
CspCI	CAANNNNNGTGG	2 cut(s)	1275, 1310
CviAII	CATG	9 cut(s)	253, 460, 582, 611, 640, 802, 895, 976, 1159
CviQI	GTAC	4 cut(s)	585, 824, 917, 1498
DdeI	CTNAG	4 cut(s)	362, 429, 779, 1290
DpnI	GATC	5 cut(s)	119, 396, 893, 1335, 1438
DpnII	GATC	5 cut(s)	117, 394, 891, 1333, 1436
DraI	TTTAAA	2 cut(s)	205, 1225
EaeI	YGGCCR	3 cut(s)	240, 561, 945
Eam1104I	CTCTTC	4 cut(s)	208, 641, 659, 1162
EarI	CTCTTC	4 cut(s)	208, 641, 659, 1162
Ecl136II	GAGCTC	1 cut(s)	776
Eco24I	GRGCYC	1 cut(s)	778
Eco31I	GGTCTC	1 cut(s)	142
Eco47I	GGWCC	1 cut(s)	1283
Eco53kI	GAGCTC	1 cut(s)	776
Eco57I	CTGAAG	1 cut(s)	1514
Eco91I	GGTNACC	1 cut(s)	493
EcoICRI	GAGCTC	1 cut(s)	776
EcoO65I	GGTNACC	1 cut(s)	493
EcoRII	CCWGG	2 cut(s)	470, 858
EcoT22I	ATGCAT	1 cut(s)	359
EcoT38I	GRGCYC	1 cut(s)	778
FaeI	CATG	9 cut(s)	256, 463, 585, 614, 643, 805, 898, 979, 1162
FaqI	GGGAC	1 cut(s)	570
FatI	CATG	9 cut(s)	252, 459, 581, 610, 639, 801, 894, 975, 1158
FbaI	TGATCA	1 cut(s)	891
FokI	GGATG	9 cut(s)	107, 290, 323, 344, 584, 773, 838, 911, 1314
FriOI	GRGCYC	1 cut(s)	778
FspBI	CTAG	5 cut(s)	189, 300, 516, 1241, 1254
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	5 cut(s)	130, 359, 557, 729, 769
HaeIII	GGCC	3 cut(s)	242, 563, 947
HapII	CCGG	2 cut(s)	308, 602
HgaI	GACGC	1 cut(s)	851
Hin1II	CATG	9 cut(s)	256, 463, 585, 614, 643, 805, 898, 979, 1162
HincII	GTYRAC	2 cut(s)	95, 1246
HindII	GTYRAC	2 cut(s)	95, 1246
HindIII	AAGCTT	1 cut(s)	332
HinfI	GANTC	4 cut(s)	143, 317, 575, 755
HpaII	CCGG	2 cut(s)	308, 602
HphI	GGTGA	4 cut(s)	505, 604, 1006, 1455
Hpy166II	GTNNAC	7 cut(s)	95, 224, 305, 826, 958, 1183, 1246
Hpy188I	TCNGA	5 cut(s)	142, 399, 760, 933, 1216
Hpy188III	TCNNGA	7 cut(s)	338, 415, 448, 786, 797, 1337, 1507
Hpy8I	GTNNAC	7 cut(s)	95, 224, 305, 826, 958, 1183, 1246
Hpy99I	CGWCG	1 cut(s)	269
HpyAV	CCTTC	8 cut(s)	40, 502, 757, 872, 1058, 1274, 1441, 1476
HpyCH4III	ACNGT	4 cut(s)	290, 673, 937, 1260
HpyCH4IV	ACGT	2 cut(s)	530, 1274
HpyCH4V	TGCA	5 cut(s)	4, 85, 234, 357, 725
HpyF10VI	GCNNNNNNNGC	5 cut(s)	605, 713, 722, 972, 1127
HpyF3I	CTNAG	4 cut(s)	362, 429, 779, 1290
HpySE526I	ACGT	2 cut(s)	530, 1274
Hsp92II	CATG	9 cut(s)	256, 463, 585, 614, 643, 805, 898, 979, 1162
KpnI	GGTACC	1 cut(s)	920
Ksp22I	TGATCA	1 cut(s)	891
KspI	CCGCGG	1 cut(s)	78
Kzo9I	GATC	5 cut(s)	117, 394, 891, 1333, 1436
LguI	GCTCTTC	2 cut(s)	659, 1162
LmnI	GCTCC	6 cut(s)	604, 656, 710, 788, 980, 1489
Lsp1109I	GCAGC	5 cut(s)	40, 205, 476, 725, 857
LweI	GCATC	8 cut(s)	72, 301, 344, 366, 733, 802, 857, 1108
MaeI	CTAG	5 cut(s)	189, 300, 516, 1241, 1254
MaeII	ACGT	2 cut(s)	530, 1274
MaeIII	GTNAC	6 cut(s)	493, 531, 862, 937, 986, 1461
MalI	GATC	5 cut(s)	119, 396, 893, 1335, 1438
MboI	GATC	5 cut(s)	117, 394, 891, 1333, 1436
MboII	GAAGA	8 cut(s)	127, 225, 451, 628, 676, 1052, 1058, 1179
MfeI	CAATTG	1 cut(s)	1190
MhlI	GDGCHC	2 cut(s)	671, 778
MlsI	TGGCCA	3 cut(s)	242, 563, 947
MluCI	AATT	5 cut(s)	236, 502, 1035, 1190, 1344
MluNI	TGGCCA	3 cut(s)	242, 563, 947
MlyI	GAGTC	2 cut(s)	137, 569
MmeI	TCCRAC	2 cut(s)	1084, 1257
Mox20I	TGGCCA	3 cut(s)	242, 563, 947
Mph1103I	ATGCAT	1 cut(s)	359
MscI	TGGCCA	3 cut(s)	242, 563, 947
MseI	TTAA	6 cut(s)	131, 204, 873, 1224, 1355, 1475
MslI	CAYNNNNRTG	1 cut(s)	458
Msp20I	TGGCCA	3 cut(s)	242, 563, 947
MspA1I	CMGCKG	5 cut(s)	53, 77, 196, 569, 815
MspCI	CTTAAG	1 cut(s)	130
MspI	CCGG	2 cut(s)	308, 602
MspR9I	CCNGG	2 cut(s)	472, 860
MunI	CAATTG	1 cut(s)	1190
Mva1269I	GAATGC	1 cut(s)	727
MvaI	CCWGG	2 cut(s)	472, 860
MvnI	CGCG	2 cut(s)	77, 153
MwoI	GCNNNNNNNGC	5 cut(s)	605, 713, 722, 972, 1127
NdeII	GATC	5 cut(s)	117, 394, 891, 1333, 1436
NlaIII	CATG	9 cut(s)	256, 463, 585, 614, 643, 805, 898, 979, 1162
NlaIV	GGNNCC	3 cut(s)	173, 600, 918
NmeAIII	GCCGAG	1 cut(s)	459
NmuCI	GTSAC	3 cut(s)	493, 862, 1461
NsiI	ATGCAT	1 cut(s)	359
NspI	RCATGY	2 cut(s)	585, 805
PciI	ACATGT	1 cut(s)	581
PciSI	GCTCTTC	2 cut(s)	659, 1162
PctI	GAATGC	1 cut(s)	727
PfeI	GAWTC	2 cut(s)	317, 755
PflFI	GACNNNGTC	1 cut(s)	1454
PleI	GAGTC	2 cut(s)	137, 569
PpsI	GAGTC	2 cut(s)	137, 569
PscI	ACATGT	1 cut(s)	581
PsiI	TTATAA	1 cut(s)	1136
Psp124BI	GAGCTC	1 cut(s)	778
Psp1406I	AACGTT	1 cut(s)	530
Psp6I	CCWGG	2 cut(s)	470, 858
PspEI	GGTNACC	1 cut(s)	493
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	2 cut(s)	470, 858
PspN4I	GGNNCC	3 cut(s)	173, 600, 918
PspPI	GGNCC	1 cut(s)	1283
PstNI	CAGNNNCTG	2 cut(s)	53, 1492
PsyI	GACNNNGTC	1 cut(s)	1454
PvuII	CAGCTG	2 cut(s)	196, 815
RsaI	GTAC	4 cut(s)	586, 825, 918, 1499
RsaNI	GTAC	4 cut(s)	585, 824, 917, 1498
RseI	CAYNNNNRTG	1 cut(s)	458
SacI	GAGCTC	1 cut(s)	778
SacII	CCGCGG	1 cut(s)	78
SapI	GCTCTTC	2 cut(s)	659, 1162
SaqAI	TTAA	6 cut(s)	131, 204, 873, 1224, 1355, 1475
Sau3AI	GATC	5 cut(s)	117, 394, 891, 1333, 1436
Sau96I	GGNCC	1 cut(s)	1283
ScaI	AGTACT	1 cut(s)	1499
SchI	GAGTC	2 cut(s)	137, 569
ScrFI	CCNGG	2 cut(s)	472, 860
SduI	GDGCHC	2 cut(s)	671, 778
SfaNI	GCATC	8 cut(s)	72, 301, 344, 366, 733, 802, 857, 1108
SfcI	CTRYAG	1 cut(s)	837
Sfr303I	CCGCGG	1 cut(s)	78
SgrBI	CCGCGG	1 cut(s)	78
SinI	GGWCC	1 cut(s)	1283
SmiMI	CAYNNNNRTG	1 cut(s)	458
SmlI	CTYRAG	3 cut(s)	130, 415, 446
SmoI	CTYRAG	3 cut(s)	130, 415, 446
SpeI	ACTAGT	1 cut(s)	1240
Sse9I	AATT	5 cut(s)	236, 502, 1035, 1190, 1344
SsiI	CCGC	8 cut(s)	51, 75, 77, 80, 151, 569, 961, 964
SspMI	CTAG	5 cut(s)	189, 300, 516, 1241, 1254
SstI	GAGCTC	1 cut(s)	778
StyD4I	CCNGG	2 cut(s)	470, 858
TaaI	ACNGT	4 cut(s)	290, 673, 937, 1260
TaiI	ACGT	2 cut(s)	533, 1277
TaqI	TCGA	2 cut(s)	578, 1177
TasI	AATT	5 cut(s)	236, 502, 1035, 1190, 1344
TatI	WGTACW	2 cut(s)	584, 1497
TauI	GCSGC	5 cut(s)	53, 77, 80, 153, 966
TfiI	GAWTC	2 cut(s)	317, 755
Tru1I	TTAA	6 cut(s)	131, 204, 873, 1224, 1355, 1475
Tru9I	TTAA	6 cut(s)	131, 204, 873, 1224, 1355, 1475
TscAI	CASTG	2 cut(s)	676, 1021
TseFI	GTSAC	3 cut(s)	493, 862, 1461
TseI	GCWGC	5 cut(s)	53, 193, 464, 713, 845
Tsp45I	GTSAC	3 cut(s)	493, 862, 1461
TspDTI	ATGAA	6 cut(s)	146, 368, 560, 628, 1059, 1356
TspRI	CASTG	2 cut(s)	676, 1021
Tth111I	GACNNNGTC	1 cut(s)	1454
Vha464I	CTTAAG	1 cut(s)	130
VpaK11BI	GGWCC	1 cut(s)	1283
XapI	RAATTY	1 cut(s)	502
XceI	RCATGY	2 cut(s)	585, 805
XspI	CTAG	5 cut(s)	189, 300, 516, 1241, 1254
ZrmI	AGTACT	1 cut(s)	1499
Zsp2I	ATGCAT	1 cut(s)	359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.