Rorug06G0317000

Belongs to the adaptor complexes small subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013830
Physical Location & Seq
Reverse (-)
46844531 .. 46850888
6358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0317000.1

Sequence Viewer

Length: 1815 bp
ATGATGAAGACTGCTTATTGGGTTGTTTTGGCTGTTTCCATAATCTTCAGCTTTTGCGCATCTGGGACTTCCTCCATTGAGAATTATCACCAAGCGTTTCCTATTGTGGAACCAGATCCTGGTCATACAAAACTTCGTCTTTCAAAGGAAGGCCTAGAGGCCATTGAAAGAATAACAACTCCGATTGCAGCTGTTGCAGTTATTGGGCCATACCGCTCTGGGAAATCTTTCTTGCTCAATCAGCTGCTCTCCCTTTCTTGTTATGAAGGTTTTGGTGTAGGGCACATGCGTGACACAAAAACAAAAGGGATTTGGGTATGGGGAACCCCAATAGAAGTGGATATTGATGGAGTAACAACTTCTGTGTTTTACCTTGATACCGAAGGATTTGAAAGTGTTGGAAAGTCAAATGTATATGATGACCGGATTTTCGCTCTTGCAACTGTCATGAGTTCTGTGCTAGTATATAACCTGCCTGAGACGATACGTGAAGCTGACATTGCACGGTTGTCATTTGCTGTTGAGCTTGCCGAAGAATTTTATGGCAGAGTGAAGGGGCAAGATGTTGCTTTTGAACCTGCAAAGCTTTTGTGGCTCATCCAACGTGATTTTCTACAAGGAAAATCTGTGCAAGAAATGGTGCACGAAGCTCTCCTTCATGTTCCTAATAGCGATGGCAACAAAAATATTGATATGGTTAACCAGATCCGGGATTCTTTAGCTATTATGGGTGATAATAGCACAGCATTTAGCTTACCACAACCTCACCTTCAACGAACGAAACTCTGTGACATGAAGGATGGCGAGCTCGACCCGGCATATGTTACAAAAAGGGACCAACTAAAACAGCTTGTTACTAGTATCATCCGTCCAAAGATTGTGCAAGGAAGACCTTTAAACGGCAAGGAATTTGTAGCCTTTTTGGAGCAGATCCTTGAAGCCCTGAACAAAGGGGAGATCCCATCAACAGGTTCTCTGGTGGAGGTTTTTAATAAAGGGATTCTTGAGCGATGCCTAAAGCTGTATAGTGAAAGGATGAAAAAAGTGCATTTACCTATCTTTGAGCAATCTCTTGTAGAATACCATGAGAGCTCTATGGCAGAAGCAATGAAGCTTTTTGAAGAGCAGCATTTTGGCCGTCACCATGCAAAGAAATCCGTAGTGCAACTAGAAGAAGAAATAGATAAGTTGTACAGGAATGTCTTAATGGCCAATGAATATCAATCTTCAAAGCTGTGTGAGGGATTGTATACCAGTTGTGAGGATAAAATGGATCATCTTCAGGTTCTCAGGCTTCCTTCAATGGCAAAATTCAATGCAGGTTTCCTACAATGCAACCAAAGTTTTGAGCACGAATGTGTTGGACCTGCAAAAACAAATTATGAGCGACGGATGATGAAGATGTTGGGAAAGTCACGCTCTCTTTTTATAAAAGAATATAATCACAGGCTCTTCAATTGGTTGGTGGCCTTCTCTCTTGTCATGGTCGTGGTGGGCAGGTTTATCATAAAGTTTATTTTGATTGAAATTGGGGCGTGGGTTCTCTTCATCTTCTTAGAGACGTACACGAGGATGTTTTGGTCAGCGGAGTCTCTTTATTACAACCCAGTTTGGCATGTAATAGTAGCCACTTGGGAAACACTTGTTTACAGCCCCATCCTTGATCTAGACAGATGGGCTATTCCAGTTGGTGTAATAGTAGCTGTATTTATATTGTATTGGCGGTGTTATGGGAAAAGAAAACAGGGGTCTGGATGGGTGCTACCCCTGTACAATAATCAGAAAGGTGGCTCGAATCGGCCAAGATCGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 ko04721 ko04961 ko05016 map04144 map04721 map04961 map05016
Pfam Domains
Protein Families
Clat_adaptor_s

Protein Analysis

604

Amino Acids

68.98

Weight (kDa)

6.75

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GBP PF02263 44 - 288 9.9e-36 Guanylate-binding protein, N-terminal domain
GBP_C PF02841 296 - 420 3e-09 Guanylate-binding protein, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013830)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47830
fragaria_vesca FvH4_2g38510
malus_domestica MD08G1013400.v1.1 MD15G1012800.v1.1
prunus_persica Prupe.1G365900_v2.0.a1
pyrus_communis pycom08g01180 pycom15g01110
rosa_chinensis RchiOBHm_Chr6g0302791
rosa_laevigata RLG00000011137
rosa_multiflora Rmu_ssc0000460.1_g000005
rosa_roxburghii Rroxscaffold_7G00165320
rosa_rugosa Rorug06G0317000
rosa_samantha Rh6AG430400 Rh6BG472200 Rh6CG442900 Rh6DG429600
rosa_wichuraiana Rw6G037280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1430
Acc16I TGCGCA 1 cut(s) 58
Acc36I ACCTGC 5 cut(s) 480, 586, 1310, 1375, 1488
AccB7I CCANNNNNTGG 1 cut(s) 119
AccBSI CCGCTC 1 cut(s) 216
AccI GTMKAC 1 cut(s) 1250
AciI CCGC 3 cut(s) 214, 1586, 1723
AclWI GGATC 5 cut(s) 110, 700, 925, 952, 1281
AcoI YGGCCR 3 cut(s) 1135, 1209, 1799
AcsI RAATTY 3 cut(s) 536, 908, 1310
AcuI CTGAAG 2 cut(s) 31, 1265
AfaI GTAC 3 cut(s) 1193, 1565, 1772
AfiI CCNNNNNNNGG 4 cut(s) 119, 709, 899, 968
AhlI ACTAGT 1 cut(s) 857
AjnI CCWGG 1 cut(s) 118
AjuI GAANNNNNNNTTGG 2 cut(s) 594, 626
AleI CACNNNNGTG 2 cut(s) 288, 1356
Alw21I GWGCWC 4 cut(s) 645, 810, 1094, 1353
Alw26I GTCTC 3 cut(s) 473, 1553, 1596
Alw44I GTGCAC 1 cut(s) 641
AlwI GGATC 5 cut(s) 110, 700, 925, 952, 1281
AlwNI CAGNNNCTG 1 cut(s) 119
AoxI GGCC 7 cut(s) 151, 159, 206, 1135, 1209, 1467, 1799
ApaLI GTGCAC 1 cut(s) 641
ApeKI GCWGC 3 cut(s) 188, 244, 1126
ApoI RAATTY 3 cut(s) 536, 908, 1310
ArsI GACNNNNNNTTYG 2 cut(s) 413, 445
Asp700I GAANNNNTTC 1 cut(s) 227
AspLEI GCGC 1 cut(s) 59
AspS9I GGNCC 3 cut(s) 206, 835, 1364
AsuC2I CCSGG 2 cut(s) 710, 815
AsuHPI GGTGA 4 cut(s) 80, 743, 758, 1133
AvaII GGWCC 2 cut(s) 835, 1364
BaeGI GKGCMC 2 cut(s) 285, 645
BalI TGGCCA 1 cut(s) 1211
BanII GRGCYC 2 cut(s) 810, 1094
BauI CACGAG 1 cut(s) 1567
BbsI GAAGAC 2 cut(s) 14, 895
Bbv12I GWGCWC 4 cut(s) 645, 810, 1094, 1353
BbvI GCAGC 3 cut(s) 200, 231, 1138
BccI CCATC 7 cut(s) 341, 668, 794, 970, 1664, 1668, 1749
BceAI ACGGC 2 cut(s) 916, 1122
BciT130I CCWGG 1 cut(s) 120
BcnI CCSGG 2 cut(s) 710, 815
BcoDI GTCTC 3 cut(s) 473, 1553, 1596
BcuI ACTAGT 1 cut(s) 857
BfaI CTAG 5 cut(s) 155, 461, 858, 1169, 1667
BfuAI ACCTGC 5 cut(s) 480, 586, 1310, 1375, 1488
BisI GCNGC 3 cut(s) 189, 245, 1127
BlsI GCNGC 3 cut(s) 190, 246, 1128
Bme1390I CCNGG 3 cut(s) 120, 710, 815
Bme18I GGWCC 2 cut(s) 835, 1364
BmgT120I GGNCC 3 cut(s) 206, 835, 1364
BmiI GGNNCC 3 cut(s) 111, 325, 836
BmrFI CCNGG 3 cut(s) 120, 710, 815
BmrI ACTGGG 1 cut(s) 1601
BmsI GCATC 2 cut(s) 68, 1001
BmuI ACTGGG 1 cut(s) 1601
BpiI GAAGAC 2 cut(s) 14, 895
BpuEI CTTGAG 1 cut(s) 1025
BpuMI CCSGG 2 cut(s) 710, 815
BsaAI YACGTR 1 cut(s) 488
BsaWI WCCGGW 1 cut(s) 423
Bsc4I CCNNNNNNNGG 4 cut(s) 119, 709, 899, 968
Bse1I ACTGG 3 cut(s) 1254, 1607, 1685
Bse3DI GCAATG 2 cut(s) 498, 1113
BseBI CCWGG 1 cut(s) 120
BseGI GGATG 8 cut(s) 597, 805, 864, 1041, 1398, 1578, 1656, 1760
BseLI CCNNNNNNNGG 4 cut(s) 119, 709, 899, 968
BseMI GCAATG 2 cut(s) 498, 1113
BseMII CTCAG 2 cut(s) 468, 1303
BseNI ACTGG 3 cut(s) 1254, 1607, 1685
BseSI GKGCMC 2 cut(s) 285, 645
BseXI GCAGC 3 cut(s) 200, 231, 1138
BshFI GGCC 7 cut(s) 153, 161, 208, 1137, 1211, 1469, 1801
BsiHKAI GWGCWC 4 cut(s) 645, 810, 1094, 1353
BsiSI CCGG 3 cut(s) 424, 709, 815
BslFI GGGAC 2 cut(s) 79, 848
BslI CCNNNNNNNGG 4 cut(s) 119, 709, 899, 968
BsmAI GTCTC 3 cut(s) 473, 1553, 1596
BsmBI CGTCTC 2 cut(s) 473, 1553
BsmFI GGGAC 2 cut(s) 79, 848
BsnI GGCC 7 cut(s) 153, 161, 208, 1137, 1211, 1469, 1801
Bsp1286I GDGCHC 5 cut(s) 285, 645, 810, 1094, 1353
Bsp1407I TGTACA 2 cut(s) 1191, 1770
Bsp143I GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
BspACI CCGC 3 cut(s) 214, 1586, 1723
BspANI GGCC 7 cut(s) 153, 161, 208, 1137, 1211, 1469, 1801
BspCNI CTCAG 2 cut(s) 469, 1302
BspHI TCATGA 1 cut(s) 447
BspLI GGNNCC 3 cut(s) 111, 325, 836
BspMI ACCTGC 5 cut(s) 480, 586, 1310, 1375, 1488
BspPI GGATC 5 cut(s) 110, 700, 925, 952, 1281
BspQI GCTCTTC 2 cut(s) 1116, 1457
BsrBI CCGCTC 1 cut(s) 216
BsrDI GCAATG 2 cut(s) 498, 1113
BsrGI TGTACA 2 cut(s) 1191, 1770
BsrI ACTGG 3 cut(s) 1254, 1607, 1685
BssMI GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
BssNAI GTATAC 1 cut(s) 1251
BssSI CACGAG 1 cut(s) 1567
Bst1107I GTATAC 1 cut(s) 1251
Bst2BI CACGAG 1 cut(s) 1567
Bst2UI CCWGG 1 cut(s) 120
Bst4CI ACNGT 2 cut(s) 445, 507
Bst6I CTCTTC 3 cut(s) 1116, 1457, 1550
BstAPI GCANNNNNTGC 1 cut(s) 194
BstAUI TGTACA 2 cut(s) 1191, 1770
BstBAI YACGTR 1 cut(s) 488
BstC8I GCNNGC 2 cut(s) 528, 806
BstDEI CTNAG 3 cut(s) 477, 1289, 1555
BstF5I GGATG 8 cut(s) 597, 805, 864, 1041, 1398, 1578, 1656, 1760
BstHHI GCGC 1 cut(s) 59
BstKTI GATC 7 cut(s) 118, 708, 933, 960, 1276, 1666, 1808
BstMAI GTCTC 3 cut(s) 473, 1553, 1596
BstMBI GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
BstMWI GCNNNNNNNGC 4 cut(s) 194, 241, 500, 592
BstNI CCWGG 1 cut(s) 120
BstNSI RCATGY 2 cut(s) 289, 1619
BstSCI CCNGG 3 cut(s) 118, 708, 813
BstSLI GKGCMC 2 cut(s) 285, 645
BstV1I GCAGC 3 cut(s) 200, 231, 1138
BstV2I GAAGAC 2 cut(s) 14, 895
BstX2I RGATCY 4 cut(s) 115, 705, 930, 957
BstYI RGATCY 4 cut(s) 115, 705, 930, 957
BstZ17I GTATAC 1 cut(s) 1251
BsuRI GGCC 7 cut(s) 153, 161, 208, 1137, 1211, 1469, 1801
BtgZI GCGATG 2 cut(s) 687, 1024
BtsCI GGATG 8 cut(s) 597, 805, 864, 1041, 1398, 1578, 1656, 1760
BveI ACCTGC 5 cut(s) 480, 586, 1310, 1375, 1488
Cac8I GCNNGC 2 cut(s) 528, 806
CaiI CAGNNNCTG 1 cut(s) 119
CciI TCATGA 1 cut(s) 447
CfoI GCGC 1 cut(s) 59
Cfr13I GGNCC 3 cut(s) 206, 835, 1364
Csp6I GTAC 3 cut(s) 1192, 1564, 1771
CspCI CAANNNNNGTGG 2 cut(s) 318, 353
CviAII CATG 8 cut(s) 286, 448, 659, 793, 1085, 1145, 1483, 1616
CviQI GTAC 3 cut(s) 1192, 1564, 1771
DdeI CTNAG 3 cut(s) 477, 1289, 1555
DpnI GATC 7 cut(s) 117, 707, 932, 959, 1275, 1665, 1807
DpnII GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
DraI TTTAAA 1 cut(s) 897
EaeI YGGCCR 3 cut(s) 1135, 1209, 1799
Eam1104I CTCTTC 3 cut(s) 1116, 1457, 1550
EarI CTCTTC 3 cut(s) 1116, 1457, 1550
Ecl136II GAGCTC 2 cut(s) 808, 1092
Eco147I AGGCCT 1 cut(s) 153
Eco24I GRGCYC 2 cut(s) 810, 1094
Eco47I GGWCC 2 cut(s) 835, 1364
Eco53kI GAGCTC 2 cut(s) 808, 1092
Eco57I CTGAAG 2 cut(s) 31, 1265
EcoICRI GAGCTC 2 cut(s) 808, 1092
EcoRII CCWGG 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 810, 1094
Esp3I CGTCTC 2 cut(s) 473, 1553
FaeI CATG 8 cut(s) 289, 451, 662, 796, 1088, 1148, 1486, 1619
FalI AAGNNNNNCTT 4 cut(s) 639, 671, 987, 1019
FaqI GGGAC 2 cut(s) 79, 848
FatI CATG 8 cut(s) 285, 447, 658, 792, 1084, 1144, 1482, 1615
FauNDI CATATG 1 cut(s) 820
FblI GTMKAC 1 cut(s) 1250
Fnu4HI GCNGC 3 cut(s) 189, 245, 1127
FokI GGATG 8 cut(s) 584, 812, 851, 1048, 1405, 1585, 1643, 1767
FriOI GRGCYC 2 cut(s) 810, 1094
Fsp4HI GCNGC 3 cut(s) 189, 245, 1127
FspBI CTAG 5 cut(s) 155, 461, 858, 1169, 1667
FspI TGCGCA 1 cut(s) 58
GlaI GCGC 1 cut(s) 58
GluI GCNGC 3 cut(s) 189, 245, 1127
HaeIII GGCC 7 cut(s) 153, 161, 208, 1137, 1211, 1469, 1801
HapII CCGG 3 cut(s) 424, 709, 815
HhaI GCGC 1 cut(s) 59
Hin1II CATG 8 cut(s) 289, 451, 662, 796, 1088, 1148, 1486, 1619
Hin6I GCGC 1 cut(s) 57
HinP1I GCGC 1 cut(s) 57
HincII GTYRAC 1 cut(s) 700
HindII GTYRAC 1 cut(s) 700
HindIII AAGCTT 2 cut(s) 584, 1112
HinfI GANTC 4 cut(s) 713, 1000, 1589, 1795
HpaI GTTAAC 1 cut(s) 700
HpaII CCGG 3 cut(s) 424, 709, 815
HphI GGTGA 4 cut(s) 80, 743, 758, 1133
Hpy166II GTNNAC 5 cut(s) 643, 700, 1251, 1566, 1648
Hpy188I TCNGA 3 cut(s) 183, 1782, 1810
Hpy188III TCNNGA 4 cut(s) 448, 1004, 1667, 1752
Hpy8I GTNNAC 5 cut(s) 643, 700, 1251, 1566, 1648
Hpy99I CGWCG 1 cut(s) 1392
HpyAV CCTTC 9 cut(s) 143, 260, 377, 547, 665, 779, 790, 1308, 1480
HpyCH4III ACNGT 2 cut(s) 445, 507
HpyCH4IV ACGT 3 cut(s) 487, 604, 1562
HpyF10VI GCNNNNNNNGC 4 cut(s) 194, 241, 500, 592
HpyF3I CTNAG 3 cut(s) 477, 1289, 1555
HpySE526I ACGT 3 cut(s) 487, 604, 1562
Hsp92II CATG 8 cut(s) 289, 451, 662, 796, 1088, 1148, 1486, 1619
HspAI GCGC 1 cut(s) 57
KspAI GTTAAC 1 cut(s) 700
Kzo9I GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
LguI GCTCTTC 2 cut(s) 1116, 1457
LmnI GCTCC 1 cut(s) 925
Lsp1109I GCAGC 3 cut(s) 200, 231, 1138
LweI GCATC 2 cut(s) 68, 1001
MaeI CTAG 5 cut(s) 155, 461, 858, 1169, 1667
MaeII ACGT 3 cut(s) 487, 604, 1562
MaeIII GTNAC 7 cut(s) 290, 352, 788, 823, 853, 1139, 1413
MalI GATC 7 cut(s) 117, 707, 932, 959, 1275, 1665, 1807
MbiI CCGCTC 1 cut(s) 216
MboI GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
MfeI CAATTG 1 cut(s) 1456
MflI RGATCY 4 cut(s) 115, 705, 930, 957
MhlI GDGCHC 5 cut(s) 285, 645, 810, 1094, 1353
MlsI TGGCCA 1 cut(s) 1211
MluCI AATT 7 cut(s) 82, 536, 908, 1310, 1378, 1456, 1527
MluNI TGGCCA 1 cut(s) 1211
MlyI GAGTC 1 cut(s) 1598
MmeI TCCRAC 3 cut(s) 379, 625, 1342
MnlI CCTC 7 cut(s) 82, 151, 774, 976, 1234, 1255, 1563
Mox20I TGGCCA 1 cut(s) 1211
MroXI GAANNNNTTC 1 cut(s) 227
MscI TGGCCA 1 cut(s) 1211
MseI TTAA 4 cut(s) 699, 896, 990, 1205
MslI CAYNNNNRTG 4 cut(s) 288, 1356, 1487, 1571
Msp20I TGGCCA 1 cut(s) 1211
MspA1I CMGCKG 3 cut(s) 191, 244, 1586
MspI CCGG 3 cut(s) 424, 709, 815
MspR9I CCNGG 3 cut(s) 120, 710, 815
MunI CAATTG 1 cut(s) 1456
MvaI CCWGG 1 cut(s) 120
MwoI GCNNNNNNNGC 4 cut(s) 194, 241, 500, 592
NciI CCSGG 2 cut(s) 710, 815
NdeI CATATG 1 cut(s) 820
NdeII GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
NlaIII CATG 8 cut(s) 289, 451, 662, 796, 1088, 1148, 1486, 1619
NlaIV GGNNCC 3 cut(s) 111, 325, 836
NmuCI GTSAC 4 cut(s) 290, 788, 1139, 1413
NsbI TGCGCA 1 cut(s) 58
NspI RCATGY 2 cut(s) 289, 1619
OliI CACNNNNGTG 2 cut(s) 288, 1356
PagI TCATGA 1 cut(s) 447
PceI AGGCCT 1 cut(s) 153
PciSI GCTCTTC 2 cut(s) 1116, 1457
PdmI GAANNNNTTC 1 cut(s) 227
PfeI GAWTC 3 cut(s) 713, 1000, 1795
PflMI CCANNNNNTGG 1 cut(s) 119
PfoI TCCNGGA 1 cut(s) 708
PkrI GCNGC 3 cut(s) 190, 246, 1128
PleI GAGTC 1 cut(s) 1597
PpsI GAGTC 1 cut(s) 1597
Ppu21I YACGTR 1 cut(s) 488
PsiI TTATAA 1 cut(s) 1430
Psp124BI GAGCTC 2 cut(s) 810, 1094
Psp6I CCWGG 1 cut(s) 118
PspGI CCWGG 1 cut(s) 118
PspN4I GGNNCC 3 cut(s) 111, 325, 836
PspPI GGNCC 3 cut(s) 206, 835, 1364
PstNI CAGNNNCTG 1 cut(s) 119
PsuI RGATCY 4 cut(s) 115, 705, 930, 957
PvuII CAGCTG 2 cut(s) 191, 244
RsaI GTAC 3 cut(s) 1193, 1565, 1772
RsaNI GTAC 3 cut(s) 1192, 1564, 1771
RseI CAYNNNNRTG 4 cut(s) 288, 1356, 1487, 1571
SacI GAGCTC 2 cut(s) 810, 1094
SapI GCTCTTC 2 cut(s) 1116, 1457
SaqAI TTAA 4 cut(s) 699, 896, 990, 1205
SatI GCNGC 3 cut(s) 189, 245, 1127
Sau3AI GATC 7 cut(s) 115, 705, 930, 957, 1273, 1663, 1805
Sau96I GGNCC 3 cut(s) 206, 835, 1364
SchI GAGTC 1 cut(s) 1598
ScrFI CCNGG 3 cut(s) 120, 710, 815
SduI GDGCHC 5 cut(s) 285, 645, 810, 1094, 1353
SfaNI GCATC 2 cut(s) 68, 1001
SinI GGWCC 2 cut(s) 835, 1364
SmiMI CAYNNNNRTG 4 cut(s) 288, 1356, 1487, 1571
SmlI CTYRAG 1 cut(s) 1004
SmoI CTYRAG 1 cut(s) 1004
SpeI ACTAGT 1 cut(s) 857
Sse9I AATT 7 cut(s) 82, 536, 908, 1310, 1378, 1456, 1527
SseBI AGGCCT 1 cut(s) 153
SsiI CCGC 3 cut(s) 214, 1586, 1723
SspI AATATT 1 cut(s) 688
SspMI CTAG 5 cut(s) 155, 461, 858, 1169, 1667
SstI GAGCTC 2 cut(s) 810, 1094
StuI AGGCCT 1 cut(s) 153
StyD4I CCNGG 3 cut(s) 118, 708, 813
TaaI ACNGT 2 cut(s) 445, 507
TaiI ACGT 3 cut(s) 490, 607, 1565
TaqI TCGA 2 cut(s) 810, 1793
TasI AATT 7 cut(s) 82, 536, 908, 1310, 1378, 1456, 1527
TatI WGTACW 2 cut(s) 1191, 1770
TfiI GAWTC 3 cut(s) 713, 1000, 1795
Tru1I TTAA 4 cut(s) 699, 896, 990, 1205
Tru9I TTAA 4 cut(s) 699, 896, 990, 1205
TseFI GTSAC 4 cut(s) 290, 788, 1139, 1413
TseI GCWGC 3 cut(s) 188, 244, 1126
Tsp45I GTSAC 4 cut(s) 290, 788, 1139, 1413
TspDTI ATGAA 9 cut(s) 20, 279, 647, 809, 1052, 1124, 1230, 1412, 1537
TspGWI ACGGA 3 cut(s) 857, 1147, 1405
Van91I CCANNNNNTGG 1 cut(s) 119
VneI GTGCAC 1 cut(s) 641
VpaK11BI GGWCC 2 cut(s) 835, 1364
XapI RAATTY 3 cut(s) 536, 908, 1310
XbaI TCTAGA 1 cut(s) 1666
XceI RCATGY 2 cut(s) 289, 1619
XmiI GTMKAC 1 cut(s) 1250
XmnI GAANNNNTTC 1 cut(s) 227
XspI CTAG 5 cut(s) 155, 461, 858, 1169, 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.