Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0017063

Physical Location & Seq

Genomic Coordinates Reverse (-)

57343298 .. 57348312

Gene Structure 5015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0440600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGCGCCACTGCGGCGGCGCCACCACTACTACCACCGCTTCCGGTACCTTATTCCTCTCATTTCCGCCGTCTCCGGCGCGCTTCTCATCCTCTTCGCCGTTCTCTTCTTGTTCCTCGCTCCTACTCCTTTCGATGTTCATCAACGTCAGAATGATCGGGTCGACGATGCGATTGGAGATACAGTAGTGTTTCGCGTCCCGAGCCGTGGCGGACGAAGATCCTCCGATCGTGATCTTTGGACTTCTAGGAATGCGAATCTCTACTATGGATGCAGCGATGCCAGCAAGAAGTTTCCGAAAGTTGAAGATGTCACGCATCCTAATAGGTATTTGGCAATTGCAACAAGTGGAGGCTTGAATCAACAAAGAACCGGGATTACAGATGCTGTTGTTGCTGCTCGCATACTGAATGCTAGTCTTGTTGTTCCAAAGTTGGACCAGAAGTCTTTCTGGAAGGATGCGAGTGAGTTTTCAGAAATCTTTGATGTTGATTATTTTATATCATATCTGTCGAAAGATGTTAAAATCATTAAGCAACTCCCAAGAAAGGGTGGTAAAACATGGACTCCATACAATATGCGTGTCCCAAGGAAGTGTAGTGAAAAATGTTATCAGACTCGTCTAGTACCTGTTCTTTTGAAAAAGCATGCTGTTCAGCTCACAAAGTTTGATTACAGACTTGCAAACAGGTTGGGTACAGATTTGCAAAAATTGAGATGCAGAGTGAATTATCATGCTTTAAAGTTTACTGAGCCAATACGGAAAATGGGTGAAAAGTTGGTTCATCGAATGAGGATGAAAAGCAAGCACTATATCACATTGCACCTGAGGTTTGAACCTGATATGCTTGCATTCTCTGGATGCTATTATGGTGGAGGAGACAGAGAAAGGAAAGAACTTGGTGCAATACGGAAGAGGTGGAAGACGTTACATATAAGCAACCCTGATAAGCCAAGGAGGCATGGGAGATGTCCCCTTACTCCAGAAGAAGTTGGTCTGATGTTGAGAGCACTTGGTTATGGCAGTGATGTTCATATTTATGTGGCATCAGGGGAAGTGTATGGTGGGGAAGACACGTTGGCGCCCCTTAAAGCACTATTTCCCAACTTCTATTCAAAAGAGACAATAGCAACCAAAGAGGAGTTGGAACCATTCTATTCATTTTCTTCTCGCATGGCTGCTCTTGATTTTATAGTTTGTGATGAAAGTGATGTTTTTGTCACTAACAACAATGGTAATATGGCCAAAATATTAGCTGGACGAAGGAGATATTTTGGGCATAAGCCTACTATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAGCAAAGAGAACACAACTTGGGAAGCTTTTGCATCTAGTGTTCGTACTTACCAGAGAGGCTTTATGGGTGAGCCACATGAAGGGAGGCCAGGCAGGGGTGGGTTTCATGAGAACCCATCCACCTGCATATGTGAAAATTCTCAGGCTAAAGTCAAGAGAGATGTGGAACCTAGAAAATACGGCAAGGGTAGTAATGTAACAAGAAAAGATGAAGTAGAAGTCGATGTCCAAGACTCGGAAGATGATCCAGAATGGCCCGACTCTGATGAGGATGAAGATCTAAGTGTCCCGCTGGAGAATGATCACTTTAACAGAACTACAGAGGATTATGATACAGTAAACTCAGAGGAACCTGAATTGGAGGAGCTTATTTCTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009755 GO:0009987 GO:0010033 GO:0010476 GO:0023052 GO:0032870 GO:0033993 GO:0034284 GO:0034285 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080167 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GASA

Protein Analysis

569

Amino Acids

65.45

Weight (kDa)

9.04

Isoelectric Point (pI)

40.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
O-FucT	PF10250	110 - 424	6.8e-102	GDP-fucose protein O-fucosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74670
fragaria_vesca	FvH4_5g14950
malus_domestica	MD14G1200300.v1.1
prunus_persica	Prupe.5G193400_v2.0.a1
pyrus_communis	pycom14g16600
rosa_chinensis	RchiOBHm_Chr7g0181391
rosa_multiflora	Rmu_sc0002060.1_g000012 Rmu_sc0004621.1_g000013
rosa_roxburghii	Rroxscaffold_3G00272050
rosa_rugosa	Rorug06G0440600
rosa_samantha	Rh7AG042800 Rh7BG042100
rosa_wichuraiana	Rw7G003560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1460
Acc36I	ACCTGC	1 cut(s)	1460
Acc65I	GGTACC	1 cut(s)	45
AccB1I	GGYRCC	4 cut(s)	4, 18, 45, 1081
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	2 cut(s)	80, 195
AciI	CCGC	6 cut(s)	13, 16, 37, 66, 210, 1619
AclWI	GGATC	2 cut(s)	213, 1568
AcoI	YGGCCR	1 cut(s)	1242
AcsI	RAATTY	1 cut(s)	1465
AcyI	GRCGYC	3 cut(s)	5, 19, 1082
AfaI	GTAC	4 cut(s)	47, 627, 697, 1375
AfiI	CCNNNNNNNGG	6 cut(s)	206, 547, 548, 1409, 1424, 1564
AflIII	ACRYGT	1 cut(s)	1074
AgsI	TTSAA	5 cut(s)	305, 358, 640, 836, 1116
AhdI	GACNNNNNGTC	1 cut(s)	442
AjnI	CCWGG	1 cut(s)	1417
AluBI	AGCT	4 cut(s)	658, 1256, 1355, 1696
AluI	AGCT	4 cut(s)	658, 1256, 1355, 1696
Alw21I	GWGCWC	1 cut(s)	1012
Alw26I	GTCTC	3 cut(s)	76, 873, 1115
AlwI	GGATC	2 cut(s)	213, 1568
AlwNI	CAGNNNCTG	1 cut(s)	386
Ama87I	CYCGRG	1 cut(s)	199
AoxI	GGCC	3 cut(s)	1242, 1415, 1583
ApeKI	GCWGC	3 cut(s)	273, 395, 1178
ApoI	RAATTY	1 cut(s)	1465
Asp700I	GAANNNNTTC	1 cut(s)	446
Asp718I	GGTACC	1 cut(s)	45
AspLEI	GCGC	5 cut(s)	7, 21, 80, 82, 1084
AspS9I	GGNCC	2 cut(s)	436, 1584
AsuC2I	CCSGG	1 cut(s)	373
AsuHPI	GGTGA	2 cut(s)	782, 1409
AvaI	CYCGRG	1 cut(s)	199
AvaII	GGWCC	1 cut(s)	436
AxyI	CCTNAGG	1 cut(s)	827
BaeI	ACNNNNGTAYC	2 cut(s)	171, 204
BalI	TGGCCA	1 cut(s)	1244
BanI	GGYRCC	4 cut(s)	4, 18, 45, 1081
BbsI	GAAGAC	2 cut(s)	929, 1077
Bbv12I	GWGCWC	1 cut(s)	1012
BbvI	GCAGC	3 cut(s)	285, 382, 1165
BccI	CCATC	1 cut(s)	1453
BceAI	ACGGC	4 cut(s)	53, 83, 189, 1525
BciT130I	CCWGG	1 cut(s)	1419
BclI	TGATCA	1 cut(s)	1630
BcnI	CCSGG	1 cut(s)	373
BcoDI	GTCTC	3 cut(s)	76, 873, 1115
BfaI	CTAG	6 cut(s)	246, 414, 623, 1365, 1500, 1708
BfmI	CTRYAG	1 cut(s)	1647
BfoI	RGCGCY	3 cut(s)	8, 22, 1085
BfuAI	ACCTGC	1 cut(s)	1460
BglI	GCCNNNNNGGC	2 cut(s)	13, 958
BglII	AGATCT	1 cut(s)	1606
BisI	GCNGC	5 cut(s)	14, 17, 274, 396, 1179
BlsI	GCNGC	5 cut(s)	15, 18, 275, 397, 1180
Bme1390I	CCNGG	2 cut(s)	373, 1419
Bme18I	GGWCC	1 cut(s)	436
BmeRI	GACNNNNNGTC	1 cut(s)	442
BmeT110I	CYCGRG	1 cut(s)	199
BmgT120I	GGNCC	2 cut(s)	436, 1584
BmiI	GGNNCC	7 cut(s)	6, 20, 47, 1083, 1149, 1497, 1680
BmrFI	CCNGG	2 cut(s)	373, 1419
BpiI	GAAGAC	2 cut(s)	929, 1077
BpmI	CTGGAG	2 cut(s)	966, 1643
BpuEI	CTTGAG	1 cut(s)	1348
BpuMI	CCSGG	1 cut(s)	373
Bsa29I	ATCGAT	1 cut(s)	1318
BsaBI	GATNNNNATC	3 cut(s)	138, 231, 1605
BsaHI	GRCGYC	3 cut(s)	5, 19, 1082
BsaJI	CCNNGG	3 cut(s)	205, 587, 953
BsaWI	WCCGGW	1 cut(s)	42
BsaXI	ACNNNNNCTCC	4 cut(s)	168, 198, 550, 580
Bsc4I	CCNNNNNNNGG	6 cut(s)	206, 547, 548, 1409, 1424, 1564
Bse21I	CCTNAGG	1 cut(s)	827
Bse3DI	GCAATG	1 cut(s)	818
Bse8I	GATNNNNATC	3 cut(s)	138, 231, 1605
BseBI	CCWGG	1 cut(s)	1419
BseCI	ATCGAT	1 cut(s)	1318
BseDI	CCNNGG	3 cut(s)	205, 587, 953
BseGI	GGATG	8 cut(s)	87, 275, 316, 463, 801, 866, 1445, 1606
BseJI	GATNNNNATC	3 cut(s)	138, 231, 1605
BseLI	CCNNNNNNNGG	6 cut(s)	206, 547, 548, 1409, 1424, 1564
BseMI	GCAATG	1 cut(s)	818
BseMII	CTCAG	4 cut(s)	741, 818, 1484, 1686
BsePI	GCGCGC	1 cut(s)	78
BseRI	GAGGAG	3 cut(s)	891, 1154, 1706
BseXI	GCAGC	3 cut(s)	285, 382, 1165
Bsh1236I	CGCG	2 cut(s)	80, 195
Bsh1285I	CGRYCG	1 cut(s)	229
BshFI	GGCC	3 cut(s)	1244, 1417, 1585
BshNI	GGYRCC	4 cut(s)	4, 18, 45, 1081
BshVI	ATCGAT	1 cut(s)	1318
BsiEI	CGRYCG	1 cut(s)	229
BsiHKAI	GWGCWC	1 cut(s)	1012
BsiHKCI	CYCGRG	1 cut(s)	199
BsiSI	CCGG	3 cut(s)	43, 75, 372
BslFI	GGGAC	4 cut(s)	182, 569, 957, 1601
BslI	CCNNNNNNNGG	6 cut(s)	206, 547, 548, 1409, 1424, 1564
BsmAI	GTCTC	3 cut(s)	76, 873, 1115
BsmBI	CGTCTC	1 cut(s)	76
BsmFI	GGGAC	4 cut(s)	182, 569, 957, 1601
BsmI	GAATGC	3 cut(s)	256, 415, 851
BsnI	GGCC	3 cut(s)	1244, 1417, 1585
BsoBI	CYCGRG	1 cut(s)	199
Bsp1286I	GDGCHC	1 cut(s)	1012
Bsp143I	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
BspACI	CCGC	6 cut(s)	13, 16, 37, 66, 210, 1619
BspANI	GGCC	3 cut(s)	1244, 1417, 1585
BspCNI	CTCAG	4 cut(s)	742, 819, 1483, 1685
BspDI	ATCGAT	1 cut(s)	1318
BspFNI	CGCG	2 cut(s)	80, 195
BspHI	TCATGA	1 cut(s)	1435
BspLI	GGNNCC	7 cut(s)	6, 20, 47, 1083, 1149, 1497, 1680
BspMI	ACCTGC	1 cut(s)	1460
BspPI	GGATC	2 cut(s)	213, 1568
BspT107I	GGYRCC	4 cut(s)	4, 18, 45, 1081
BsrDI	GCAATG	1 cut(s)	818
BssECI	CCNNGG	3 cut(s)	205, 587, 953
BssHII	GCGCGC	1 cut(s)	78
BssMI	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
BssNI	GRCGYC	3 cut(s)	5, 19, 1082
BssT1I	CCWWGG	2 cut(s)	587, 953
Bst2UI	CCWGG	1 cut(s)	1419
Bst4CI	ACNGT	2 cut(s)	184, 1666
Bst6I	CTCTTC	3 cut(s)	98, 110, 908
BstACI	GRCGYC	3 cut(s)	5, 19, 1082
BstC8I	GCNNGC	6 cut(s)	80, 283, 400, 648, 806, 849
BstDEI	CTNAG	5 cut(s)	750, 827, 1470, 1610, 1672
BstDSI	CCRYGG	1 cut(s)	205
BstF5I	GGATG	8 cut(s)	87, 275, 316, 463, 801, 866, 1445, 1606
BstFNI	CGCG	2 cut(s)	80, 195
BstH2I	RGCGCY	3 cut(s)	8, 22, 1085
BstHHI	GCGC	5 cut(s)	7, 21, 80, 82, 1084
BstKTI	GATC	7 cut(s)	157, 221, 229, 235, 1576, 1609, 1633
BstMAI	GTCTC	3 cut(s)	76, 873, 1115
BstMBI	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
BstMCI	CGRYCG	1 cut(s)	229
BstMWI	GCNNNNNNNGC	5 cut(s)	13, 201, 282, 392, 958
BstNI	CCWGG	1 cut(s)	1419
BstNSI	RCATGY	1 cut(s)	650
BstSCI	CCNGG	2 cut(s)	371, 1417
BstSFI	CTRYAG	1 cut(s)	1647
BstUI	CGCG	2 cut(s)	80, 195
BstV1I	GCAGC	3 cut(s)	285, 382, 1165
BstV2I	GAAGAC	2 cut(s)	929, 1077
BstX2I	RGATCY	2 cut(s)	218, 1606
BstYI	RGATCY	2 cut(s)	218, 1606
Bsu15I	ATCGAT	1 cut(s)	1318
Bsu36I	CCTNAGG	1 cut(s)	827
BsuRI	GGCC	3 cut(s)	1244, 1417, 1585
BsuTUI	ATCGAT	1 cut(s)	1318
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	291
BtsCI	GGATG	8 cut(s)	87, 275, 316, 463, 801, 866, 1445, 1606
BtsI	GCAGTG	2 cut(s)	8, 1030
BtsIMutI	CAGTG	2 cut(s)	8, 1030
BveI	ACCTGC	1 cut(s)	1460
Cac8I	GCNNGC	6 cut(s)	80, 283, 400, 648, 806, 849
CaiI	CAGNNNCTG	1 cut(s)	386
CciI	TCATGA	1 cut(s)	1435
CfoI	GCGC	5 cut(s)	7, 21, 80, 82, 1084
Cfr13I	GGNCC	2 cut(s)	436, 1584
ClaI	ATCGAT	1 cut(s)	1318
CseI	GACGC	1 cut(s)	184
Csp6I	GTAC	4 cut(s)	46, 626, 696, 1374
CviAII	CATG	7 cut(s)	561, 647, 734, 962, 1174, 1406, 1436
CviQI	GTAC	4 cut(s)	46, 626, 696, 1374
DdeI	CTNAG	5 cut(s)	750, 827, 1470, 1610, 1672
DinI	GGCGCC	3 cut(s)	6, 20, 1083
DpnI	GATC	7 cut(s)	156, 220, 228, 234, 1575, 1608, 1632
DpnII	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
DraI	TTTAAA	1 cut(s)	741
DriI	GACNNNNNGTC	1 cut(s)	442
EaeI	YGGCCR	1 cut(s)	1242
Eam1104I	CTCTTC	3 cut(s)	98, 110, 908
Eam1105I	GACNNNNNGTC	1 cut(s)	442
EarI	CTCTTC	3 cut(s)	98, 110, 908
EciI	GGCGGA	2 cut(s)	55, 225
Eco130I	CCWWGG	2 cut(s)	587, 953
Eco47I	GGWCC	1 cut(s)	436
Eco81I	CCTNAGG	1 cut(s)	827
Eco88I	CYCGRG	1 cut(s)	199
EcoRII	CCWGG	1 cut(s)	1417
EcoT14I	CCWWGG	2 cut(s)	587, 953
EgeI	GGCGCC	3 cut(s)	6, 20, 1083
EheI	GGCGCC	3 cut(s)	6, 20, 1083
ErhI	CCWWGG	2 cut(s)	587, 953
Esp3I	CGTCTC	1 cut(s)	76
FaeI	CATG	7 cut(s)	564, 650, 737, 965, 1177, 1409, 1439
FaqI	GGGAC	4 cut(s)	182, 569, 957, 1601
FatI	CATG	7 cut(s)	560, 646, 733, 961, 1173, 1405, 1435
FauI	CCCGC	1 cut(s)	1626
FauNDI	CATATG	1 cut(s)	1457
FbaI	TGATCA	1 cut(s)	1630
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	5 cut(s)	14, 17, 274, 396, 1179
FokI	GGATG	8 cut(s)	74, 282, 303, 470, 808, 873, 1432, 1613
Fsp4HI	GCNGC	5 cut(s)	14, 17, 274, 396, 1179
FspBI	CTAG	6 cut(s)	246, 414, 623, 1365, 1500, 1708
GlaI	GCGC	5 cut(s)	6, 20, 79, 81, 1083
GluI	GCNGC	5 cut(s)	14, 17, 274, 396, 1179
GsuI	CTGGAG	2 cut(s)	966, 1643
HaeII	RGCGCY	3 cut(s)	8, 22, 1085
HaeIII	GGCC	3 cut(s)	1244, 1417, 1585
HapII	CCGG	3 cut(s)	43, 75, 372
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	5 cut(s)	7, 21, 80, 82, 1084
Hin1I	GRCGYC	3 cut(s)	5, 19, 1082
Hin1II	CATG	7 cut(s)	564, 650, 737, 965, 1177, 1409, 1439
Hin6I	GCGC	5 cut(s)	5, 19, 78, 80, 1082
HinP1I	GCGC	5 cut(s)	5, 19, 78, 80, 1082
HincII	GTYRAC	1 cut(s)	163
HindII	GTYRAC	1 cut(s)	163
HindIII	AAGCTT	1 cut(s)	1353
HinfI	GANTC	6 cut(s)	256, 358, 565, 616, 1562, 1589
HpaII	CCGG	3 cut(s)	43, 75, 372
HphI	GGTGA	2 cut(s)	782, 1409
Hpy166II	GTNNAC	3 cut(s)	163, 747, 1669
Hpy8I	GTNNAC	3 cut(s)	163, 747, 1669
Hpy99I	CGWCG	1 cut(s)	167
HpyAV	CCTTC	3 cut(s)	448, 1257, 1403
HpyCH4III	ACNGT	2 cut(s)	184, 1666
HpyCH4IV	ACGT	3 cut(s)	145, 926, 1076
HpyF10VI	GCNNNNNNNGC	5 cut(s)	13, 201, 282, 392, 958
HpyF3I	CTNAG	5 cut(s)	750, 827, 1470, 1610, 1672
HpySE526I	ACGT	3 cut(s)	145, 926, 1076
Hsp92I	GRCGYC	3 cut(s)	5, 19, 1082
Hsp92II	CATG	7 cut(s)	564, 650, 737, 965, 1177, 1409, 1439
HspAI	GCGC	5 cut(s)	5, 19, 78, 80, 1082
KasI	GGCGCC	3 cut(s)	4, 18, 1081
KpnI	GGTACC	1 cut(s)	49
Ksp22I	TGATCA	1 cut(s)	1630
Kzo9I	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
LmnI	GCTCC	2 cut(s)	124, 1693
Lsp1109I	GCAGC	3 cut(s)	285, 382, 1165
MaeI	CTAG	6 cut(s)	246, 414, 623, 1365, 1500, 1708
MaeII	ACGT	3 cut(s)	145, 926, 1076
MaeIII	GTNAC	4 cut(s)	310, 927, 1219, 1525
MalI	GATC	7 cut(s)	156, 220, 228, 234, 1575, 1608, 1632
MboI	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
MfeI	CAATTG	1 cut(s)	336
MflI	RGATCY	2 cut(s)	218, 1606
MhlI	GDGCHC	1 cut(s)	1012
MlsI	TGGCCA	1 cut(s)	1244
MluCI	AATT	5 cut(s)	336, 710, 727, 1465, 1685
MluNI	TGGCCA	1 cut(s)	1244
Mly113I	GGCGCC	3 cut(s)	5, 19, 1082
MlyI	GAGTC	4 cut(s)	559, 610, 1556, 1583
MmeI	TCCRAC	2 cut(s)	414, 1125
Mox20I	TGGCCA	1 cut(s)	1244
MroXI	GAANNNNTTC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	1244
MseI	TTAA	5 cut(s)	522, 531, 740, 1089, 1638
MslI	CAYNNNNRTG	1 cut(s)	1038
Msp20I	TGGCCA	1 cut(s)	1244
MspA1I	CMGCKG	1 cut(s)	1621
MspI	CCGG	3 cut(s)	43, 75, 372
MspR9I	CCNGG	2 cut(s)	373, 1419
MunI	CAATTG	1 cut(s)	336
Mva1269I	GAATGC	3 cut(s)	256, 415, 851
MvaI	CCWGG	1 cut(s)	1419
MvnI	CGCG	2 cut(s)	80, 195
MwoI	GCNNNNNNNGC	5 cut(s)	13, 201, 282, 392, 958
NarI	GGCGCC	3 cut(s)	5, 19, 1082
NciI	CCSGG	1 cut(s)	373
NdeI	CATATG	1 cut(s)	1457
NdeII	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
NlaIII	CATG	7 cut(s)	564, 650, 737, 965, 1177, 1409, 1439
NlaIV	GGNNCC	7 cut(s)	6, 20, 47, 1083, 1149, 1497, 1680
NmuCI	GTSAC	2 cut(s)	310, 1219
NspI	RCATGY	1 cut(s)	650
PaeI	GCATGC	1 cut(s)	650
PagI	TCATGA	1 cut(s)	1435
PaqCI	CACCTGC	1 cut(s)	1460
PauI	GCGCGC	1 cut(s)	78
PctI	GAATGC	3 cut(s)	256, 415, 851
PdmI	GAANNNNTTC	1 cut(s)	446
PfeI	GAWTC	2 cut(s)	256, 358
PkrI	GCNGC	5 cut(s)	15, 18, 275, 397, 1180
Ple19I	CGATCG	1 cut(s)	229
PleI	GAGTC	4 cut(s)	559, 610, 1556, 1583
PluTI	GGCGCC	3 cut(s)	8, 22, 1085
PpsI	GAGTC	4 cut(s)	559, 610, 1556, 1583
Psp6I	CCWGG	1 cut(s)	1417
PspGI	CCWGG	1 cut(s)	1417
PspN4I	GGNNCC	7 cut(s)	6, 20, 47, 1083, 1149, 1497, 1680
PspPI	GGNCC	2 cut(s)	436, 1584
PsrI	GAACNNNNNNTAC	2 cut(s)	361, 393
PstNI	CAGNNNCTG	1 cut(s)	386
PsuI	RGATCY	2 cut(s)	218, 1606
PteI	GCGCGC	1 cut(s)	78
PvuI	CGATCG	1 cut(s)	229
RsaI	GTAC	4 cut(s)	47, 627, 697, 1375
RsaNI	GTAC	4 cut(s)	46, 626, 696, 1374
RseI	CAYNNNNRTG	1 cut(s)	1038
SalI	GTCGAC	1 cut(s)	161
SaqAI	TTAA	5 cut(s)	522, 531, 740, 1089, 1638
SatI	GCNGC	5 cut(s)	14, 17, 274, 396, 1179
Sau3AI	GATC	7 cut(s)	154, 218, 226, 232, 1573, 1606, 1630
Sau96I	GGNCC	2 cut(s)	436, 1584
SchI	GAGTC	4 cut(s)	559, 610, 1556, 1583
ScrFI	CCNGG	2 cut(s)	373, 1419
SduI	GDGCHC	1 cut(s)	1012
SfcI	CTRYAG	1 cut(s)	1647
SfoI	GGCGCC	3 cut(s)	6, 20, 1083
SinI	GGWCC	1 cut(s)	436
SmiMI	CAYNNNNRTG	1 cut(s)	1038
SmlI	CTYRAG	1 cut(s)	1327
SmoI	CTYRAG	1 cut(s)	1327
SphI	GCATGC	1 cut(s)	650
Sse9I	AATT	5 cut(s)	336, 710, 727, 1465, 1685
SsiI	CCGC	6 cut(s)	13, 16, 37, 66, 210, 1619
SspDI	GGCGCC	3 cut(s)	4, 18, 1081
SspI	AATATT	1 cut(s)	1251
SspMI	CTAG	6 cut(s)	246, 414, 623, 1365, 1500, 1708
StyD4I	CCNGG	2 cut(s)	371, 1417
StyI	CCWWGG	2 cut(s)	587, 953
TaaI	ACNGT	2 cut(s)	184, 1666
TaiI	ACGT	3 cut(s)	148, 929, 1079
TaqI	TCGA	6 cut(s)	132, 162, 512, 787, 1318, 1551
TasI	AATT	5 cut(s)	336, 710, 727, 1465, 1685
TauI	GCSGC	2 cut(s)	16, 19
TfiI	GAWTC	2 cut(s)	256, 358
Tru1I	TTAA	5 cut(s)	522, 531, 740, 1089, 1638
Tru9I	TTAA	5 cut(s)	522, 531, 740, 1089, 1638
TscAI	CASTG	2 cut(s)	15, 1030
TseFI	GTSAC	2 cut(s)	310, 1219
TseI	GCWGC	3 cut(s)	273, 395, 1178
Tsp45I	GTSAC	2 cut(s)	310, 1219
TspGWI	ACGGA	2 cut(s)	775, 925
TspRI	CASTG	2 cut(s)	15, 1030
VpaK11BI	GGWCC	1 cut(s)	436
XapI	RAATTY	1 cut(s)	1465
XceI	RCATGY	1 cut(s)	650
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1141
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	1 cut(s)	446
XspI	CTAG	6 cut(s)	246, 414, 623, 1365, 1500, 1708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.