Rorug06G0506100

Mediates the uptake of pyruvate into mitochondria

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
62150357 .. 62153638
3282 bp
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UTR
Exon/CDS
Intron
Rorug06G0506100.1

Sequence Viewer

Length: 321 bp
ATGCATGGTGGTGTGGAGAATGATGGTGGAGAGTTTACTTGGCCTCTGGATGTCAAGATTCTGTCGGGTTCAGTTGGTCGCAGTATCACCATGGCGGCCAGCCTCTGCGTTGAAGTGAAGAGTTTGGTGTTAGGTCTTGGTTCTTTTGGTATTTTGGGCTTCGGTTTTAGTTTTAGATACCTTTTGCATTGCATCCTATCTTATGCTCAGAATGAAGAGGCCTATGTGAAATTTGCTAGATTTGCTCTTGTTTGCTTGCTCGTTGGTCTCATTGGTTTGGTCCTGTTGATATCATTGGTGGGCTTGCTGTTGGTTGGCTGA

Protein Analysis

106

Amino Acids

11.27

Weight (kDa)

6.03

Isoelectric Point (pI)

25.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 95
AcoI YGGCCR 1 cut(s) 96
AcsI RAATTY 1 cut(s) 230
AgsI TTSAA 1 cut(s) 113
Alw26I GTCTC 1 cut(s) 272
AlwNI CAGNNNCTG 1 cut(s) 105
AoxI GGCC 3 cut(s) 41, 96, 219
ApoI RAATTY 1 cut(s) 230
AspS9I GGNCC 1 cut(s) 280
AsuHPI GGTGA 1 cut(s) 79
AvaII GGWCC 1 cut(s) 280
BccI CCATC 1 cut(s) 17
BcoDI GTCTC 1 cut(s) 272
BfaI CTAG 1 cut(s) 237
BisI GCNGC 1 cut(s) 96
BlsI GCNGC 1 cut(s) 97
Bme18I GGWCC 1 cut(s) 280
BmgT120I GGNCC 1 cut(s) 280
BmsI GCATC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 1 cut(s) 90
Bse3DI GCAATG 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 2 cut(s) 55, 192
BseMI GCAATG 1 cut(s) 187
BseMII CTCAG 1 cut(s) 221
BshFI GGCC 3 cut(s) 43, 98, 221
BsmAI GTCTC 1 cut(s) 272
BsnI GGCC 3 cut(s) 43, 98, 221
Bso31I GGTCTC 1 cut(s) 272
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 1 cut(s) 95
BspANI GGCC 3 cut(s) 43, 98, 221
BspCNI CTCAG 1 cut(s) 220
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 90
Bst6I CTCTTC 2 cut(s) 113, 210
BstC8I GCNNGC 3 cut(s) 100, 257, 305
BstDEI CTNAG 1 cut(s) 207
BstDSI CCRYGG 1 cut(s) 90
BstF5I GGATG 2 cut(s) 55, 192
BstMAI GTCTC 1 cut(s) 272
BstMWI GCNNNNNNNGC 1 cut(s) 242
BsuRI GGCC 3 cut(s) 43, 98, 221
BtgI CCRYGG 1 cut(s) 90
BtsCI GGATG 2 cut(s) 55, 192
Cac8I GCNNGC 3 cut(s) 100, 257, 305
CaiI CAGNNNCTG 1 cut(s) 105
Cfr13I GGNCC 1 cut(s) 280
CviAII CATG 2 cut(s) 5, 91
CviJI RGCY 7 cut(s) 43, 98, 102, 159, 221, 303, 318
CviKI_1 RGCY 7 cut(s) 43, 98, 102, 159, 221, 303, 318
DdeI CTNAG 1 cut(s) 207
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 113, 210
EarI CTCTTC 2 cut(s) 113, 210
Eco130I CCWWGG 1 cut(s) 90
Eco147I AGGCCT 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 272
Eco32I GATATC 1 cut(s) 291
Eco47I GGWCC 1 cut(s) 280
EcoRV GATATC 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 90
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 90
FaeI CATG 2 cut(s) 8, 94
FaiI YATR 4 cut(s) 6, 92, 204, 225
FatI CATG 2 cut(s) 4, 90
Fnu4HI GCNGC 1 cut(s) 96
FokI GGATG 2 cut(s) 62, 179
Fsp4HI GCNGC 1 cut(s) 96
FspBI CTAG 1 cut(s) 237
GluI GCNGC 1 cut(s) 96
HaeIII GGCC 3 cut(s) 43, 98, 221
Hin1II CATG 2 cut(s) 8, 94
HinfI GANTC 1 cut(s) 58
HphI GGTGA 1 cut(s) 79
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 1 cut(s) 210
Hpy188III TCNNGA 2 cut(s) 47, 55
Hpy8I GTNNAC 1 cut(s) 36
HpyCH4V TGCA 3 cut(s) 4, 187, 192
HpyF10VI GCNNNNNNNGC 1 cut(s) 242
HpyF3I CTNAG 1 cut(s) 207
Hsp92II CATG 2 cut(s) 8, 94
LpnPI CCDG 3 cut(s) 32, 112, 296
LweI GCATC 1 cut(s) 201
MaeI CTAG 1 cut(s) 237
MboII GAAGA 2 cut(s) 130, 227
MluCI AATT 1 cut(s) 230
MnlI CCTC 3 cut(s) 54, 113, 211
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 1 cut(s) 9
MwoI GCNNNNNNNGC 1 cut(s) 242
NcoI CCATGG 1 cut(s) 90
NlaIII CATG 2 cut(s) 8, 94
NsiI ATGCAT 1 cut(s) 6
PceI AGGCCT 1 cut(s) 221
PfeI GAWTC 1 cut(s) 58
PkrI GCNGC 1 cut(s) 97
PspPI GGNCC 1 cut(s) 280
PstNI CAGNNNCTG 1 cut(s) 105
RseI CAYNNNNRTG 1 cut(s) 9
SatI GCNGC 1 cut(s) 96
Sau96I GGNCC 1 cut(s) 280
SetI ASST 2 cut(s) 136, 183
SfaNI GCATC 1 cut(s) 201
SinI GGWCC 1 cut(s) 280
SmiMI CAYNNNNRTG 1 cut(s) 9
Sse9I AATT 1 cut(s) 230
SseBI AGGCCT 1 cut(s) 221
SsiI CCGC 1 cut(s) 95
SspMI CTAG 1 cut(s) 237
StuI AGGCCT 1 cut(s) 221
StyI CCWWGG 1 cut(s) 90
TasI AATT 1 cut(s) 230
TauI GCSGC 1 cut(s) 98
TfiI GAWTC 1 cut(s) 58
TspDTI ATGAA 1 cut(s) 228
VpaK11BI GGWCC 1 cut(s) 280
XapI RAATTY 1 cut(s) 230
XspI CTAG 1 cut(s) 237
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.