Basic Information
Type: gene
Biological Identity
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
5779689 .. 5780395
Rorug07G0075000.1
Length: 291 bp
ATGTACGTGAGAAAACCATCTAACAAATCAAAGTTACGATCGGCTTCCAAGTTAAGAGCAGGAATACCTATGGCAAGAAGATACTCTCTGCAATGTTTTCTTGAAAAGCGTAGGGACAGGATCATCAGCACATCACCTTATGCCCTTCCAAGAGAAAAGCAGGCGGAGGAGGATAATGAGGCTGACAAGGGGAAGGGATTGAATGAAGAAAATCGGAGACTGCTTCCTGACCTTTCACCTTTCCCTTCACGTTTAGGCTACTTTTCTCTCAATTCATCTCATCAAGGCTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.
Protein Analysis
10.13
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Jas_motif |
PF09425 |
23 - 47 |
3.1e-13 |
Jas motif |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0016853)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AciI |
CCGC |
1 cut(s)
|
164 |
| AclWI |
GGATC |
1 cut(s)
|
128 |
| AfaI |
GTAC |
1 cut(s)
|
5 |
| AgsI |
TTSAA |
2 cut(s)
|
104, 202 |
| Alw26I |
GTCTC |
1 cut(s)
|
211 |
| AlwI |
GGATC |
1 cut(s)
|
128 |
| AsuHPI |
GGTGA |
2 cut(s)
|
126, 228 |
| BccI |
CCATC |
1 cut(s)
|
25 |
| BcoDI |
GTCTC |
1 cut(s)
|
211 |
| BsaAI |
YACGTR |
1 cut(s)
|
7 |
| Bse3DI |
GCAATG |
1 cut(s)
|
98 |
| BseMI |
GCAATG |
1 cut(s)
|
98 |
| BseRI |
GAGGAG |
1 cut(s)
|
182 |
| Bsh1285I |
CGRYCG |
1 cut(s)
|
41 |
| BsiEI |
CGRYCG |
1 cut(s)
|
41 |
| BslFI |
GGGAC |
1 cut(s)
|
128 |
| BsmAI |
GTCTC |
1 cut(s)
|
211 |
| BsmFI |
GGGAC |
1 cut(s)
|
128 |
| Bsp143I |
GATC |
2 cut(s)
|
38, 120 |
| BspACI |
CCGC |
1 cut(s)
|
164 |
| BspPI |
GGATC |
1 cut(s)
|
128 |
| BsrDI |
GCAATG |
1 cut(s)
|
98 |
| BssMI |
GATC |
2 cut(s)
|
38, 120 |
| BstBAI |
YACGTR |
1 cut(s)
|
7 |
| BstC8I |
GCNNGC |
1 cut(s)
|
162 |
| BstKTI |
GATC |
2 cut(s)
|
41, 123 |
| BstMAI |
GTCTC |
1 cut(s)
|
211 |
| BstMBI |
GATC |
2 cut(s)
|
38, 120 |
| BstMCI |
CGRYCG |
1 cut(s)
|
41 |
| Cac8I |
GCNNGC |
1 cut(s)
|
162 |
| Csp6I |
GTAC |
1 cut(s)
|
4 |
| CviJI |
RGCY |
4 cut(s)
|
44, 182, 258, 288 |
| CviKI_1 |
RGCY |
4 cut(s)
|
44, 182, 258, 288 |
| CviQI |
GTAC |
1 cut(s)
|
4 |
| DpnI |
GATC |
2 cut(s)
|
40, 122 |
| DpnII |
GATC |
2 cut(s)
|
38, 120 |
| EciI |
GGCGGA |
1 cut(s)
|
179 |
| FaiI |
YATR |
2 cut(s)
|
71, 141 |
| FaqI |
GGGAC |
1 cut(s)
|
128 |
| HphI |
GGTGA |
2 cut(s)
|
126, 228 |
| Hpy188I |
TCNGA |
1 cut(s)
|
216 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
101, 227 |
| HpyAV |
CCTTC |
3 cut(s)
|
155, 187, 255 |
| HpyCH4IV |
ACGT |
2 cut(s)
|
6, 250 |
| HpyCH4V |
TGCA |
1 cut(s)
|
91 |
| HpySE526I |
ACGT |
2 cut(s)
|
6, 250 |
| Kzo9I |
GATC |
2 cut(s)
|
38, 120 |
| LpnPI |
CCDG |
4 cut(s)
|
45, 103, 146, 240 |
| MaeII |
ACGT |
2 cut(s)
|
6, 250 |
| MaeIII |
GTNAC |
1 cut(s)
|
33 |
| MalI |
GATC |
2 cut(s)
|
40, 122 |
| MboI |
GATC |
2 cut(s)
|
38, 120 |
| MboII |
GAAGA |
2 cut(s)
|
90, 218 |
| MluCI |
AATT |
1 cut(s)
|
271 |
| MnlI |
CCTC |
3 cut(s)
|
160, 163, 172 |
| MseI |
TTAA |
1 cut(s)
|
53 |
| NdeII |
GATC |
2 cut(s)
|
38, 120 |
| Ple19I |
CGATCG |
1 cut(s)
|
41 |
| Ppu21I |
YACGTR |
1 cut(s)
|
7 |
| PvuI |
CGATCG |
1 cut(s)
|
41 |
| RsaI |
GTAC |
1 cut(s)
|
5 |
| RsaNI |
GTAC |
1 cut(s)
|
4 |
| SaqAI |
TTAA |
1 cut(s)
|
53 |
| Sau3AI |
GATC |
2 cut(s)
|
38, 120 |
| SetI |
ASST |
6 cut(s)
|
9, 70, 139, 234, 241, 253 |
| Sse9I |
AATT |
1 cut(s)
|
271 |
| SsiI |
CCGC |
1 cut(s)
|
164 |
| TaiI |
ACGT |
2 cut(s)
|
9, 253 |
| TasI |
AATT |
1 cut(s)
|
271 |
| Tru1I |
TTAA |
1 cut(s)
|
53 |
| Tru9I |
TTAA |
1 cut(s)
|
53 |
| TspDTI |
ATGAA |
2 cut(s)
|
219, 264 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.