B3 DNA binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g19881 FvH4_6g29430 |
| prunus_persica | Prupe.5G061400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0204681 |
| rosa_laevigata | RLG00000003438 |
| rosa_multiflora | Rmu_sc0007104.1_g000008 |
| rosa_rugosa | Rorug07G0085600 |
| rosa_samantha | Rh7AG215500 Rh7BG212700 Rh7CG228600 Rh7DG223200 |
| rosa_wichuraiana | Rw7G018680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1183 |
| Acc36I | ACCTGC | 5 cut(s) | 1183, 1651, 1765, 1831, 2548 |
| Acc65I | GGTACC | 1 cut(s) | 680 |
| AccB1I | GGYRCC | 5 cut(s) | 32, 290, 680, 2439, 2660 |
| AccB7I | CCANNNNNTGG | 8 cut(s) | 176, 272, 353, 425, 608, 656, 881, 2329 |
| AccI | GTMKAC | 4 cut(s) | 155, 2204, 2597, 2712 |
| AccII | CGCG | 1 cut(s) | 1673 |
| AciI | CCGC | 3 cut(s) | 791, 1671, 1748 |
| AclWI | GGATC | 7 cut(s) | 541, 577, 1343, 1356, 1820, 2061, 2074 |
| AcoI | YGGCCR | 3 cut(s) | 406, 754, 1198 |
| AcsI | RAATTY | 2 cut(s) | 1728, 2040 |
| AcuI | CTGAAG | 6 cut(s) | 1469, 1489, 2024, 2576, 2657, 2704 |
| AcyI | GRCGYC | 1 cut(s) | 2440 |
| AdeI | CACNNNGTG | 1 cut(s) | 2216 |
| AfeI | AGCGCT | 1 cut(s) | 439 |
| AhlI | ACTAGT | 1 cut(s) | 1490 |
| AjnI | CCWGG | 3 cut(s) | 1537, 1922, 2353 |
| AleI | CACNNNNGTG | 1 cut(s) | 2721 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 538, 570 |
| Alw21I | GWGCWC | 5 cut(s) | 148, 481, 697, 745, 1942 |
| Alw26I | GTCTC | 5 cut(s) | 505, 831, 1086, 2420, 2677 |
| Alw44I | GTGCAC | 1 cut(s) | 144 |
| AlwI | GGATC | 7 cut(s) | 541, 577, 1343, 1356, 1820, 2061, 2074 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 536, 1451, 1643 |
| Ama87I | CYCGRG | 1 cut(s) | 1956 |
| Aor51HI | AGCGCT | 1 cut(s) | 439 |
| AoxI | GGCC | 6 cut(s) | 406, 754, 916, 1198, 1967, 2646 |
| ApaLI | GTGCAC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 7 cut(s) | 134, 341, 1622, 2051, 2237, 2333, 2765 |
| ApoI | RAATTY | 2 cut(s) | 1728, 2040 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2041 |
| Asp718I | GGTACC | 1 cut(s) | 680 |
| AspLEI | GCGC | 6 cut(s) | 440, 814, 841, 1331, 1762, 2442 |
| AspS9I | GGNCC | 4 cut(s) | 429, 916, 1076, 2606 |
| AsuC2I | CCSGG | 1 cut(s) | 1256 |
| AsuHPI | GGTGA | 7 cut(s) | 90, 435, 1107, 1125, 1182, 2243, 2435 |
| AvaI | CYCGRG | 1 cut(s) | 1956 |
| AvaII | GGWCC | 3 cut(s) | 429, 1076, 2606 |
| BaeGI | GKGCMC | 4 cut(s) | 37, 148, 649, 2223 |
| BalI | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| BamHI | GGATCC | 2 cut(s) | 1348, 2066 |
| BanI | GGYRCC | 5 cut(s) | 32, 290, 680, 2439, 2660 |
| BanII | GRGCYC | 2 cut(s) | 862, 2316 |
| BauI | CACGAG | 1 cut(s) | 1031 |
| BbsI | GAAGAC | 4 cut(s) | 1200, 1227, 2588, 2751 |
| Bbv12I | GWGCWC | 5 cut(s) | 148, 481, 697, 745, 1942 |
| BbvCI | CCTCAGC | 1 cut(s) | 2544 |
| BbvI | GCAGC | 7 cut(s) | 146, 328, 1634, 2063, 2224, 2345, 2752 |
| BccI | CCATC | 8 cut(s) | 157, 265, 1038, 1303, 1360, 1720, 1787, 1926 |
| BceAI | ACGGC | 1 cut(s) | 808 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 195, 229 |
| BciT130I | CCWGG | 3 cut(s) | 1539, 1924, 2355 |
| BclI | TGATCA | 1 cut(s) | 2176 |
| BcnI | CCSGG | 1 cut(s) | 1256 |
| BcoDI | GTCTC | 5 cut(s) | 505, 831, 1086, 2420, 2677 |
| BcuI | ACTAGT | 1 cut(s) | 1490 |
| BfaI | CTAG | 3 cut(s) | 618, 666, 1491 |
| BfmI | CTRYAG | 2 cut(s) | 369, 1620 |
| BfoI | RGCGCY | 3 cut(s) | 441, 1332, 2443 |
| BfuAI | ACCTGC | 5 cut(s) | 1183, 1651, 1765, 1831, 2548 |
| BisI | GCNGC | 8 cut(s) | 135, 342, 792, 1623, 2052, 2238, 2334, 2766 |
| BlpI | GCTNAGC | 1 cut(s) | 622 |
| BlsI | GCNGC | 8 cut(s) | 136, 343, 793, 1624, 2053, 2239, 2335, 2767 |
| BmcAI | AGTACT | 1 cut(s) | 487 |
| Bme1390I | CCNGG | 4 cut(s) | 1256, 1539, 1924, 2355 |
| Bme18I | GGWCC | 3 cut(s) | 429, 1076, 2606 |
| BmeT110I | CYCGRG | 1 cut(s) | 1956 |
| BmgT120I | GGNCC | 4 cut(s) | 429, 916, 1076, 2606 |
| BmiI | GGNNCC | 9 cut(s) | 34, 292, 430, 682, 917, 1350, 2068, 2441, 2662 |
| BmrFI | CCNGG | 4 cut(s) | 1256, 1539, 1924, 2355 |
| BmrI | ACTGGG | 3 cut(s) | 1439, 2595, 2761 |
| BmsI | GCATC | 6 cut(s) | 191, 1187, 1665, 2580, 2622, 2752 |
| BmuI | ACTGGG | 3 cut(s) | 1439, 2595, 2761 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1600, 1798 |
| BpiI | GAAGAC | 4 cut(s) | 1200, 1227, 2588, 2751 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 208, 240, 2040, 2072 |
| BpmI | CTGGAG | 3 cut(s) | 402, 1197, 2004 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2544 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 622 |
| BpuEI | CTTGAG | 2 cut(s) | 1596, 2471 |
| BpuMI | CCSGG | 1 cut(s) | 1256 |
| BsaHI | GRCGYC | 1 cut(s) | 2440 |
| BsaJI | CCNNGG | 6 cut(s) | 409, 1899, 1922, 1923, 2354, 2649 |
| BsaWI | WCCGGW | 1 cut(s) | 185 |
| Bse1I | ACTGG | 9 cut(s) | 76, 1096, 1389, 1434, 1637, 2021, 2334, 2590, 2756 |
| Bse3DI | GCAATG | 1 cut(s) | 1011 |
| BseBI | CCWGG | 3 cut(s) | 1539, 1924, 2355 |
| BseDI | CCNNGG | 6 cut(s) | 409, 1899, 1922, 1923, 2354, 2649 |
| BseGI | GGATG | 9 cut(s) | 113, 182, 1265, 1775, 1779, 1912, 1918, 2761, 2767 |
| BseMI | GCAATG | 1 cut(s) | 1011 |
| BseMII | CTCAG | 8 cut(s) | 636, 684, 875, 1490, 1694, 1977, 2067, 2535 |
| BseNI | ACTGG | 9 cut(s) | 76, 1096, 1389, 1434, 1637, 2021, 2334, 2590, 2756 |
| BseRI | GAGGAG | 1 cut(s) | 1779 |
| BseSI | GKGCMC | 4 cut(s) | 37, 148, 649, 2223 |
| BseXI | GCAGC | 7 cut(s) | 146, 328, 1634, 2063, 2224, 2345, 2752 |
| BseYI | CCCAGC | 3 cut(s) | 346, 601, 649 |
| BsgI | GTGCAG | 2 cut(s) | 1692, 2483 |
| Bsh1236I | CGCG | 1 cut(s) | 1673 |
| BshFI | GGCC | 6 cut(s) | 408, 756, 918, 1200, 1969, 2648 |
| BshNI | GGYRCC | 5 cut(s) | 32, 290, 680, 2439, 2660 |
| BsiHKAI | GWGCWC | 5 cut(s) | 148, 481, 697, 745, 1942 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1956 |
| BsiSI | CCGG | 4 cut(s) | 186, 467, 1256, 1810 |
| BslFI | GGGAC | 4 cut(s) | 442, 559, 1938, 2210 |
| BsmAI | GTCTC | 5 cut(s) | 505, 831, 1086, 2420, 2677 |
| BsmBI | CGTCTC | 2 cut(s) | 831, 1086 |
| BsmFI | GGGAC | 4 cut(s) | 442, 559, 1938, 2210 |
| BsnI | GGCC | 6 cut(s) | 408, 756, 918, 1200, 1969, 2648 |
| BsoBI | CYCGRG | 1 cut(s) | 1956 |
| Bsp1407I | TGTACA | 1 cut(s) | 1627 |
| Bsp143I | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 622 |
| BspACI | CCGC | 3 cut(s) | 791, 1671, 1748 |
| BspANI | GGCC | 6 cut(s) | 408, 756, 918, 1200, 1969, 2648 |
| BspCNI | CTCAG | 8 cut(s) | 635, 683, 874, 1489, 1693, 1978, 2068, 2536 |
| BspFNI | CGCG | 1 cut(s) | 1673 |
| BspLI | GGNNCC | 9 cut(s) | 34, 292, 430, 682, 917, 1350, 2068, 2441, 2662 |
| BspMAI | CTGCAG | 1 cut(s) | 1624 |
| BspMI | ACCTGC | 5 cut(s) | 1183, 1651, 1765, 1831, 2548 |
| BspPI | GGATC | 7 cut(s) | 541, 577, 1343, 1356, 1820, 2061, 2074 |
| BspT107I | GGYRCC | 5 cut(s) | 32, 290, 680, 2439, 2660 |
| BsrDI | GCAATG | 1 cut(s) | 1011 |
| BsrGI | TGTACA | 1 cut(s) | 1627 |
| BsrI | ACTGG | 9 cut(s) | 76, 1096, 1389, 1434, 1637, 2021, 2334, 2590, 2756 |
| BssECI | CCNNGG | 6 cut(s) | 409, 1899, 1922, 1923, 2354, 2649 |
| BssMI | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| BssNAI | GTATAC | 2 cut(s) | 2205, 2598 |
| BssNI | GRCGYC | 1 cut(s) | 2440 |
| BssSI | CACGAG | 1 cut(s) | 1031 |
| BssT1I | CCWWGG | 2 cut(s) | 409, 1899 |
| Bst1107I | GTATAC | 2 cut(s) | 2205, 2598 |
| Bst2BI | CACGAG | 1 cut(s) | 1031 |
| Bst2UI | CCWGG | 3 cut(s) | 1539, 1924, 2355 |
| Bst4CI | ACNGT | 7 cut(s) | 903, 1080, 1137, 1233, 1314, 1965, 2495 |
| Bst6I | CTCTTC | 3 cut(s) | 1488, 2633, 2688 |
| BstACI | GRCGYC | 1 cut(s) | 2440 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 143, 1184 |
| BstAUI | TGTACA | 1 cut(s) | 1627 |
| BstC8I | GCNNGC | 5 cut(s) | 123, 324, 1011, 1570, 1739 |
| BstF5I | GGATG | 9 cut(s) | 113, 182, 1265, 1775, 1779, 1912, 1918, 2761, 2767 |
| BstFNI | CGCG | 1 cut(s) | 1673 |
| BstH2I | RGCGCY | 3 cut(s) | 441, 1332, 2443 |
| BstHHI | GCGC | 6 cut(s) | 440, 814, 841, 1331, 1762, 2442 |
| BstKTI | GATC | 7 cut(s) | 536, 572, 1351, 1815, 2069, 2179, 2449 |
| BstMAI | GTCTC | 5 cut(s) | 505, 831, 1086, 2420, 2677 |
| BstMBI | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| BstNI | CCWGG | 3 cut(s) | 1539, 1924, 2355 |
| BstNSI | RCATGY | 1 cut(s) | 1741 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1600, 1798 |
| BstSCI | CCNGG | 4 cut(s) | 1254, 1537, 1922, 2353 |
| BstSFI | CTRYAG | 2 cut(s) | 369, 1620 |
| BstSLI | GKGCMC | 4 cut(s) | 37, 148, 649, 2223 |
| BstUI | CGCG | 1 cut(s) | 1673 |
| BstV1I | GCAGC | 7 cut(s) | 146, 328, 1634, 2063, 2224, 2345, 2752 |
| BstV2I | GAAGAC | 4 cut(s) | 1200, 1227, 2588, 2751 |
| BstX2I | RGATCY | 3 cut(s) | 533, 1348, 2066 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 926, 2033 |
| BstYI | RGATCY | 3 cut(s) | 533, 1348, 2066 |
| BstZ17I | GTATAC | 2 cut(s) | 2205, 2598 |
| BsuRI | GGCC | 6 cut(s) | 408, 756, 918, 1200, 1969, 2648 |
| BtgZI | GCGATG | 1 cut(s) | 1688 |
| BtsCI | GGATG | 9 cut(s) | 113, 182, 1265, 1775, 1779, 1912, 1918, 2761, 2767 |
| BtsI | GCAGTG | 1 cut(s) | 888 |
| BtsIMutI | CAGTG | 5 cut(s) | 888, 1876, 1970, 2000, 2728 |
| BveI | ACCTGC | 5 cut(s) | 1183, 1651, 1765, 1831, 2548 |
| Cac8I | GCNNGC | 5 cut(s) | 123, 324, 1011, 1570, 1739 |
| CaiI | CAGNNNCTG | 3 cut(s) | 536, 1451, 1643 |
| CfoI | GCGC | 6 cut(s) | 440, 814, 841, 1331, 1762, 2442 |
| Cfr13I | GGNCC | 4 cut(s) | 429, 916, 1076, 2606 |
| CseI | GACGC | 1 cut(s) | 2301 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 10, 45, 382, 417 |
| CviAII | CATG | 7 cut(s) | 1738, 2027, 2138, 2171, 2255, 2396, 2707 |
| DinI | GGCGCC | 1 cut(s) | 2441 |
| DpnI | GATC | 7 cut(s) | 535, 571, 1350, 1814, 2068, 2178, 2448 |
| DpnII | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| DraI | TTTAAA | 1 cut(s) | 2133 |
| DraIII | CACNNNGTG | 1 cut(s) | 2216 |
| EaeI | YGGCCR | 3 cut(s) | 406, 754, 1198 |
| Eam1104I | CTCTTC | 3 cut(s) | 1488, 2633, 2688 |
| EarI | CTCTTC | 3 cut(s) | 1488, 2633, 2688 |
| Eco130I | CCWWGG | 2 cut(s) | 409, 1899 |
| Eco24I | GRGCYC | 2 cut(s) | 862, 2316 |
| Eco47I | GGWCC | 3 cut(s) | 429, 1076, 2606 |
| Eco47III | AGCGCT | 1 cut(s) | 439 |
| Eco57I | CTGAAG | 6 cut(s) | 1469, 1489, 2024, 2576, 2657, 2704 |
| Eco88I | CYCGRG | 1 cut(s) | 1956 |
| EcoRII | CCWGG | 3 cut(s) | 1537, 1922, 2353 |
| EcoT14I | CCWWGG | 2 cut(s) | 409, 1899 |
| EcoT22I | ATGCAT | 1 cut(s) | 2573 |
| EcoT38I | GRGCYC | 2 cut(s) | 862, 2316 |
| EgeI | GGCGCC | 1 cut(s) | 2441 |
| EheI | GGCGCC | 1 cut(s) | 2441 |
| ErhI | CCWWGG | 2 cut(s) | 409, 1899 |
| Esp3I | CGTCTC | 2 cut(s) | 831, 1086 |
| FaeI | CATG | 7 cut(s) | 1741, 2030, 2141, 2174, 2258, 2399, 2710 |
| FaqI | GGGAC | 4 cut(s) | 442, 559, 1938, 2210 |
| FatI | CATG | 7 cut(s) | 1737, 2026, 2137, 2170, 2254, 2395, 2706 |
| FauI | CCCGC | 1 cut(s) | 1678 |
| FbaI | TGATCA | 1 cut(s) | 2176 |
| FblI | GTMKAC | 4 cut(s) | 155, 2204, 2597, 2712 |
| Fnu4HI | GCNGC | 8 cut(s) | 135, 342, 792, 1623, 2052, 2238, 2334, 2766 |
| FokI | GGATG | 9 cut(s) | 100, 169, 1252, 1762, 1766, 1905, 1919, 2768, 2774 |
| FriOI | GRGCYC | 2 cut(s) | 862, 2316 |
| Fsp4HI | GCNGC | 8 cut(s) | 135, 342, 792, 1623, 2052, 2238, 2334, 2766 |
| FspBI | CTAG | 3 cut(s) | 618, 666, 1491 |
| GlaI | GCGC | 6 cut(s) | 439, 813, 840, 1330, 1761, 2441 |
| GluI | GCNGC | 8 cut(s) | 135, 342, 792, 1623, 2052, 2238, 2334, 2766 |
| GsaI | CCCAGC | 3 cut(s) | 350, 605, 653 |
| GsuI | CTGGAG | 3 cut(s) | 402, 1197, 2004 |
| HaeII | RGCGCY | 3 cut(s) | 441, 1332, 2443 |
| HaeIII | GGCC | 6 cut(s) | 408, 756, 918, 1200, 1969, 2648 |
| HapII | CCGG | 4 cut(s) | 186, 467, 1256, 1810 |
| HgaI | GACGC | 1 cut(s) | 2301 |
| HhaI | GCGC | 6 cut(s) | 440, 814, 841, 1331, 1762, 2442 |
| Hin1I | GRCGYC | 1 cut(s) | 2440 |
| Hin1II | CATG | 7 cut(s) | 1741, 2030, 2141, 2174, 2258, 2399, 2710 |
| Hin6I | GCGC | 6 cut(s) | 438, 812, 839, 1329, 1760, 2440 |
| HinP1I | GCGC | 6 cut(s) | 438, 812, 839, 1329, 1760, 2440 |
| HincII | GTYRAC | 2 cut(s) | 867, 2713 |
| HindII | GTYRAC | 2 cut(s) | 867, 2713 |
| HinfI | GANTC | 5 cut(s) | 217, 992, 1786, 2198, 2319 |
| HpaII | CCGG | 4 cut(s) | 186, 467, 1256, 1810 |
| HphI | GGTGA | 7 cut(s) | 90, 435, 1107, 1125, 1182, 2243, 2435 |
| Hpy188III | TCNNGA | 6 cut(s) | 1031, 1451, 1783, 2046, 2450, 2575 |
| Hpy99I | CGWCG | 2 cut(s) | 196, 2295 |
| HpyAV | CCTTC | 5 cut(s) | 1348, 2368, 2597, 2638, 2683 |
| HpyCH4III | ACNGT | 7 cut(s) | 903, 1080, 1137, 1233, 1314, 1965, 2495 |
| HpyCH4IV | ACGT | 3 cut(s) | 191, 1205, 2702 |
| HpySE526I | ACGT | 3 cut(s) | 191, 1205, 2702 |
| Hsp92I | GRCGYC | 1 cut(s) | 2440 |
| Hsp92II | CATG | 7 cut(s) | 1741, 2030, 2141, 2174, 2258, 2399, 2710 |
| HspAI | GCGC | 6 cut(s) | 438, 812, 839, 1329, 1760, 2440 |
| KasI | GGCGCC | 1 cut(s) | 2439 |
| KpnI | GGTACC | 1 cut(s) | 684 |
| Ksp22I | TGATCA | 1 cut(s) | 2176 |
| Kzo9I | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| Lsp1109I | GCAGC | 7 cut(s) | 146, 328, 1634, 2063, 2224, 2345, 2752 |
| LweI | GCATC | 6 cut(s) | 191, 1187, 1665, 2580, 2622, 2752 |
| MaeI | CTAG | 3 cut(s) | 618, 666, 1491 |
| MaeII | ACGT | 3 cut(s) | 191, 1205, 2702 |
| MaeIII | GTNAC | 6 cut(s) | 937, 1028, 1102, 1771, 1800, 2548 |
| MalI | GATC | 7 cut(s) | 535, 571, 1350, 1814, 2068, 2178, 2448 |
| MboI | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| MfeI | CAATTG | 2 cut(s) | 1689, 2241 |
| MflI | RGATCY | 3 cut(s) | 533, 1348, 2066 |
| MlsI | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| MluNI | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| Mly113I | GGCGCC | 1 cut(s) | 2440 |
| MlyI | GAGTC | 4 cut(s) | 226, 1001, 1780, 2192 |
| MmeI | TCCRAC | 3 cut(s) | 582, 2094, 2314 |
| Mox20I | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| Mph1103I | ATGCAT | 1 cut(s) | 2573 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2041 |
| MscI | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| MseI | TTAA | 7 cut(s) | 1281, 1524, 2121, 2132, 2412, 2532, 2565 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2031, 2400, 2721 |
| Msp20I | TGGCCA | 3 cut(s) | 408, 756, 1200 |
| MspA1I | CMGCKG | 1 cut(s) | 1625 |
| MspI | CCGG | 4 cut(s) | 186, 467, 1256, 1810 |
| MspR9I | CCNGG | 4 cut(s) | 1256, 1539, 1924, 2355 |
| MunI | CAATTG | 2 cut(s) | 1689, 2241 |
| MvaI | CCWGG | 3 cut(s) | 1539, 1924, 2355 |
| MvnI | CGCG | 1 cut(s) | 1673 |
| NarI | GGCGCC | 1 cut(s) | 2440 |
| NciI | CCSGG | 1 cut(s) | 1256 |
| NdeII | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| NlaIII | CATG | 7 cut(s) | 1741, 2030, 2141, 2174, 2258, 2399, 2710 |
| NlaIV | GGNNCC | 9 cut(s) | 34, 292, 430, 682, 917, 1350, 2068, 2441, 2662 |
| NmeAIII | GCCGAG | 1 cut(s) | 2674 |
| NmuCI | GTSAC | 4 cut(s) | 937, 1028, 1102, 1800 |
| NsiI | ATGCAT | 1 cut(s) | 2573 |
| NspI | RCATGY | 1 cut(s) | 1741 |
| OliI | CACNNNNGTG | 1 cut(s) | 2721 |
| PaeI | GCATGC | 1 cut(s) | 1741 |
| PaqCI | CACCTGC | 1 cut(s) | 1183 |
| PasI | CCCWGGG | 1 cut(s) | 1923 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1670 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2041 |
| PfeI | GAWTC | 1 cut(s) | 2319 |
| PflMI | CCANNNNNTGG | 8 cut(s) | 176, 272, 353, 425, 608, 656, 881, 2329 |
| PkrI | GCNGC | 8 cut(s) | 136, 343, 793, 1624, 2053, 2239, 2335, 2767 |
| PleI | GAGTC | 4 cut(s) | 225, 1000, 1780, 2192 |
| PluTI | GGCGCC | 1 cut(s) | 2443 |
| PpsI | GAGTC | 4 cut(s) | 225, 1000, 1780, 2192 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1600, 1798 |
| Psp6I | CCWGG | 3 cut(s) | 1537, 1922, 2353 |
| PspFI | CCCAGC | 3 cut(s) | 346, 601, 649 |
| PspGI | CCWGG | 3 cut(s) | 1537, 1922, 2353 |
| PspN4I | GGNNCC | 9 cut(s) | 34, 292, 430, 682, 917, 1350, 2068, 2441, 2662 |
| PspPI | GGNCC | 4 cut(s) | 429, 916, 1076, 2606 |
| PstI | CTGCAG | 1 cut(s) | 1624 |
| PstNI | CAGNNNCTG | 3 cut(s) | 536, 1451, 1643 |
| PsuI | RGATCY | 3 cut(s) | 533, 1348, 2066 |
| PvuII | CAGCTG | 1 cut(s) | 1625 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2031, 2400, 2721 |
| SalI | GTCGAC | 1 cut(s) | 2711 |
| SaqAI | TTAA | 7 cut(s) | 1281, 1524, 2121, 2132, 2412, 2532, 2565 |
| SatI | GCNGC | 8 cut(s) | 135, 342, 792, 1623, 2052, 2238, 2334, 2766 |
| Sau3AI | GATC | 7 cut(s) | 533, 569, 1348, 1812, 2066, 2176, 2446 |
| Sau96I | GGNCC | 4 cut(s) | 429, 916, 1076, 2606 |
| ScaI | AGTACT | 1 cut(s) | 487 |
| SchI | GAGTC | 4 cut(s) | 226, 1001, 1780, 2192 |
| ScrFI | CCNGG | 4 cut(s) | 1256, 1539, 1924, 2355 |
| SfaNI | GCATC | 6 cut(s) | 191, 1187, 1665, 2580, 2622, 2752 |
| SfcI | CTRYAG | 2 cut(s) | 369, 1620 |
| SfoI | GGCGCC | 1 cut(s) | 2441 |
| SinI | GGWCC | 3 cut(s) | 429, 1076, 2606 |
| SmiI | ATTTAAAT | 1 cut(s) | 2133 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2031, 2400, 2721 |
| SmlI | CTYRAG | 2 cut(s) | 1611, 2450 |
| SmoI | CTYRAG | 2 cut(s) | 1611, 2450 |
| SpeI | ACTAGT | 1 cut(s) | 1490 |
| SphI | GCATGC | 1 cut(s) | 1741 |
| SsiI | CCGC | 3 cut(s) | 791, 1671, 1748 |
| SspDI | GGCGCC | 1 cut(s) | 2439 |
| SspMI | CTAG | 3 cut(s) | 618, 666, 1491 |
| StyD4I | CCNGG | 4 cut(s) | 1254, 1537, 1922, 2353 |
| StyI | CCWWGG | 2 cut(s) | 409, 1899 |
| SwaI | ATTTAAAT | 1 cut(s) | 2133 |
| TaaI | ACNGT | 7 cut(s) | 903, 1080, 1137, 1233, 1314, 1965, 2495 |
| TaiI | ACGT | 3 cut(s) | 194, 1208, 2705 |
| TaqI | TCGA | 5 cut(s) | 215, 1696, 1792, 2574, 2712 |
| TatI | WGTACW | 5 cut(s) | 455, 485, 1627, 2167, 2727 |
| TauI | GCSGC | 1 cut(s) | 794 |
| TfiI | GAWTC | 1 cut(s) | 2319 |
| Tru1I | TTAA | 7 cut(s) | 1281, 1524, 2121, 2132, 2412, 2532, 2565 |
| Tru9I | TTAA | 7 cut(s) | 1281, 1524, 2121, 2132, 2412, 2532, 2565 |
| TscAI | CASTG | 5 cut(s) | 895, 1876, 1970, 2007, 2728 |
| TseFI | GTSAC | 4 cut(s) | 937, 1028, 1102, 1800 |
| TseI | GCWGC | 7 cut(s) | 134, 341, 1622, 2051, 2237, 2333, 2765 |
| Tsp45I | GTSAC | 4 cut(s) | 937, 1028, 1102, 1800 |
| TspDTI | ATGAA | 9 cut(s) | 102, 786, 1098, 1137, 1233, 1395, 1893, 2695, 2757 |
| TspRI | CASTG | 5 cut(s) | 895, 1876, 1970, 2007, 2728 |
| Van91I | CCANNNNNTGG | 8 cut(s) | 176, 272, 353, 425, 608, 656, 881, 2329 |
| VneI | GTGCAC | 1 cut(s) | 144 |
| VpaK11BI | GGWCC | 3 cut(s) | 429, 1076, 2606 |
| XapI | RAATTY | 2 cut(s) | 1728, 2040 |
| XceI | RCATGY | 1 cut(s) | 1741 |
| XmiI | GTMKAC | 4 cut(s) | 155, 2204, 2597, 2712 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2041 |
| XspI | CTAG | 3 cut(s) | 618, 666, 1491 |
| ZrmI | AGTACT | 1 cut(s) | 487 |
| Zsp2I | ATGCAT | 1 cut(s) | 2573 |