Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005486

Physical Location & Seq

Genomic Coordinates Reverse (-)

8636692 .. 8638519

Gene Structure 1828 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0110700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGCAGGCTTTCAAGGTCATAGCGTGGAACTGTCGAGAAACCCTAGCTTCTCCTGATCTACTGGATTCCGTCCAAAGTCGTATAGGGTTCGATGGGGTAGTCTGCGCACCCAAAAACGATGATTGTCGAGGCTTAGCGCTCTTCTGGCGCAATGAGGTCCCTGTTCGGCTTCGACACTACTCTGCTAATCATATTGATGCGGAGGTTGGGGTTTTGGGATCGCCGGGAGTCTTCCGATTCACTGGTATTTACGGAGTCGCTACTGTAGCAAACCGCAATACGACATGGAGCCTATTACGCACTCTGGCATCACAGTGCCGCCTGCCGTGGCTTGTTGCTAGCGACTTCAATGAGATCCTAATCAGCATGACAAATCTGGGGGTCCTCCGCGTTATGCAGCACAGATGGCTTGCTTTCGTTAAGCTCTTATTCACGTGGTCCAACCGCTTCACCAAGGAACAGCTGGATAGAGCCTGCCAGACGGTACAGTGGAGGGACGTGTATCCTTTCTCCCGCTGTATCACACTTCCGCTTAGCAGGTCGGATCACTATCCTTTACTTATTGAGGTTAGCCCTAAACTGGTGGCTCGAAATCGACCTCCGAAACACTTTCGTTTTGAGGAGATGTGGCTTCAACACTCGGATTGTGGGAATGTTGTTCAGCAAGGATGGATGCTCCCAACTATTGGAGAGCCTATGTCTCAGGTTAGTAGGAAAATCAGACAGACAGGTCACCTGCTCATGGATTGGCATTCTGGGGTTTTTCAGCAACGTCAGACTGAGATGAAACTGATCCAAAGTAAGTTAGATACTCTGATGAAGCAGAAGTTTGACCCTAATCATTTTGATATACAGAAAGCCCTTCAGTTCCGTTTGAATGAGTTACTGTCTGCTAATGAGACTTATTGGAGGCAGCGTTCAAGGATCCAGTGGCCCAAAGACGGTGATCGTAATACAACCCTTTTTCATAGGTGTGCCTCTAATCGGAGAAGTAGGAATCGGGTCAAAGGTTTGCTTAATGACTCAGGACAGTGGACTTCCAATCCGGCAGAGGTGAATGACTTGATCATTAAGTATTATGATTCTATTTTCAAAGCTGGGAGTTCGGATCCGACAGCACTTGAGTCAGTTACTTGCTTGCAACCCAAGGTTTCTGCCGCAATGAATGCAGATCTTAATGCGTCCTATTCCGATTCTGAGATCAAGAAAGCCCTGTTTCAGATGCACCCATCCAAGTCTCTGGGTCCTGATGATATGTCGCCTTCCTTTTTCCAACAGTTTTGGAGCGTTGTAGAGAAGGACGTTTGTATGGCGGTCAGGGAGGTTCTTTGTACAGGTCAGATTTCTCAAGAATCTAAATTCACTTATCTTACTCTGATCCCAAAGATTAAAGAGCCACAATTAGTCTCTGATTTACGACCAATTGCTTTATGCATTGTCGTCTACAAAATTGCTTCAAAAGTCTTGGCAAATAGATTGAAGTTGCTTCTCCCTCAGATTATTTCACCGTTACAGAGTGCTTTTGTCCCAGGGAGGCTGATCTCTGATAACACTTTGGTGGCTACTGAAGTAGCTTACTTTATGAAGAAGCTCCGTAGGCAGGTAGATGGTTTCTTCTCTTTAAAACTTGATATTTCTAAGGCTTATGATCGTCTAGAATGGCAGTATTTGGAGGCCGTTATGTTGAAGTTGGGATTTTGCCCGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0010363 GO:0010941 GO:0031347 GO:0031348 GO:0034051 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045088 GO:0045595 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0060548 GO:0065007 GO:0080134 GO:0080135

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-LSD1

Protein Analysis

569

Amino Acids

65.35

Weight (kDa)

9.38

Isoelectric Point (pI)

46.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	467 - 565	3.4e-09	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32540 AT1G32540 AT1G32540 AT1G32540 AT1G32540 AT1G32540 AT1G32540
fragaria_vesca	FvH4_5g21750
malus_domestica	MD06G1032500.v1.1
prunus_persica	Prupe.5G039600_v2.0.a1 Prupe.5G039600_v2.0.a1 Prupe.5G039600_v2.0.a1 Prupe.5G039600_v2.0.a1 Prupe.5G039600_v2.0.a1
pyrus_communis	pycom06g02690
rosa_chinensis	RchiOBHm_Chr7g0209241
rosa_laevigata	RLG00000003154
rosa_multiflora	Rmu_sc0001701.1_g000013
rosa_roxburghii	Rroxscaffold_3G00249600
rosa_rugosa	Rorug07G0110400 Rorug07G0110500 Rorug07G0110500 Rorug07G0110600 Rorug07G0110700
rosa_samantha	Rh7AG244600 Rh7BG239900 Rh7CG260200 Rh7DG251500
rosa_wichuraiana	Rw7G020750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	744
AasI	GACNNNNNNGTC	1 cut(s)	729
Acc16I	TGCGCA	1 cut(s)	106
Acc36I	ACCTGC	3 cut(s)	528, 744, 1591
AccB7I	CCANNNNNTGG	1 cut(s)	686
AccI	GTMKAC	1 cut(s)	1443
AccII	CGCG	1 cut(s)	390
AciI	CCGC	9 cut(s)	200, 274, 319, 388, 445, 514, 530, 1158, 1313
AclWI	GGATC	9 cut(s)	226, 349, 552, 787, 919, 932, 1103, 1116, 1372
AcsI	RAATTY	1 cut(s)	1358
AcuI	CTGAAG	2 cut(s)	848, 1587
AcvI	CACGTG	1 cut(s)	435
AfaI	GTAC	2 cut(s)	486, 1333
AfeI	AGCGCT	1 cut(s)	138
AfiI	CCNNNNNNNGG	6 cut(s)	580, 686, 742, 941, 984, 1600
AflIII	ACRYGT	1 cut(s)	498
AgsI	TTSAA	9 cut(s)	13, 349, 635, 877, 921, 1093, 1458, 1480, 1687
AjiI	CACGTC	1 cut(s)	499
AjnI	CCWGG	1 cut(s)	1528
AleI	CACNNNNGTG	1 cut(s)	1556
AloI	GAACNNNNNNTCC	2 cut(s)	901, 933
AluBI	AGCT	6 cut(s)	47, 424, 463, 1097, 1574, 1591
AluI	AGCT	6 cut(s)	47, 424, 463, 1097, 1574, 1591
Alw26I	GTCTC	4 cut(s)	705, 893, 1242, 1411
AlwI	GGATC	9 cut(s)	226, 349, 552, 787, 919, 932, 1103, 1116, 1372
Aor51HI	AGCGCT	1 cut(s)	138
AoxI	GGCC	2 cut(s)	932, 1674
ApeKI	GCWGC	2 cut(s)	397, 913
ApoI	RAATTY	1 cut(s)	1358
AspLEI	GCGC	3 cut(s)	107, 139, 150
AspS9I	GGNCC	5 cut(s)	157, 382, 438, 933, 1244
AsuC2I	CCSGG	1 cut(s)	225
AsuHPI	GGTGA	5 cut(s)	442, 725, 956, 1066, 1497
AsuNHI	GCTAGC	1 cut(s)	338
AvaII	GGWCC	4 cut(s)	157, 382, 438, 1244
BamHI	GGATCC	2 cut(s)	924, 1108
BbrPI	CACGTG	1 cut(s)	435
BbsI	GAAGAC	1 cut(s)	223
BbvI	GCAGC	2 cut(s)	409, 925
BccI	CCATC	5 cut(s)	86, 399, 663, 1237, 1601
BceAI	ACGGC	2 cut(s)	310, 1661
BciT130I	CCWGG	1 cut(s)	1530
BciVI	GTATCC	1 cut(s)	513
BclI	TGATCA	1 cut(s)	1065
BcnI	CCSGG	1 cut(s)	225
BcoDI	GTCTC	4 cut(s)	705, 893, 1242, 1411
BfaI	CTAG	3 cut(s)	44, 339, 1655
BfmI	CTRYAG	1 cut(s)	264
BfoI	RGCGCY	1 cut(s)	140
BfuAI	ACCTGC	3 cut(s)	528, 744, 1591
BfuI	GTATCC	1 cut(s)	513
BglII	AGATCT	1 cut(s)	1171
BisI	GCNGC	4 cut(s)	319, 398, 914, 1158
BlpI	GCTNAGC	2 cut(s)	133, 533
BlsI	GCNGC	4 cut(s)	320, 399, 915, 1159
Bme1390I	CCNGG	2 cut(s)	225, 1530
Bme18I	GGWCC	4 cut(s)	157, 382, 438, 1244
BmgBI	CACGTC	1 cut(s)	499
BmgT120I	GGNCC	5 cut(s)	157, 382, 438, 933, 1244
BmiI	GGNNCC	6 cut(s)	159, 290, 383, 926, 1110, 1245
BmrFI	CCNGG	2 cut(s)	225, 1530
BmsI	GCATC	4 cut(s)	187, 317, 663, 1212
BmtI	GCTAGC	1 cut(s)	342
BpiI	GAAGAC	1 cut(s)	223
Bpu1102I	GCTNAGC	2 cut(s)	133, 533
BpuEI	CTTGAG	2 cut(s)	1142, 1332
BpuMI	CCSGG	1 cut(s)	225
BsaAI	YACGTR	1 cut(s)	435
BsaBI	GATNNNNATC	2 cut(s)	359, 549
BsaJI	CCNNGG	5 cut(s)	326, 453, 1146, 1528, 1529
BsaXI	ACNNNNNCTCC	2 cut(s)	901, 931
Bsc4I	CCNNNNNNNGG	6 cut(s)	580, 686, 742, 941, 984, 1600
Bse1I	ACTGG	4 cut(s)	66, 247, 585, 928
Bse3DI	GCAATG	2 cut(s)	157, 1167
Bse8I	GATNNNNATC	2 cut(s)	359, 549
BseBI	CCWGG	1 cut(s)	1530
BseDI	CCNNGG	5 cut(s)	326, 453, 1146, 1528, 1529
BseGI	GGATG	3 cut(s)	674, 678, 1229
BseJI	GATNNNNATC	2 cut(s)	359, 549
BseLI	CCNNNNNNNGG	6 cut(s)	580, 686, 742, 941, 984, 1600
BseMI	GCAATG	2 cut(s)	157, 1167
BseMII	CTCAG	5 cut(s)	716, 771, 1038, 1188, 1508
BseNI	ACTGG	4 cut(s)	66, 247, 585, 928
BseRI	GAGGAG	1 cut(s)	635
BseXI	GCAGC	2 cut(s)	409, 925
BseYI	CCCAGC	1 cut(s)	1097
Bsh1236I	CGCG	1 cut(s)	390
BshFI	GGCC	2 cut(s)	934, 1676
BsiSI	CCGG	2 cut(s)	224, 1046
BslFI	GGGAC	3 cut(s)	143, 509, 1511
BslI	CCNNNNNNNGG	6 cut(s)	580, 686, 742, 941, 984, 1600
BsmAI	GTCTC	4 cut(s)	705, 893, 1242, 1411
BsmFI	GGGAC	3 cut(s)	143, 509, 1511
BsmI	GAATGC	2 cut(s)	751, 1171
BsnI	GGCC	2 cut(s)	934, 1676
Bsp1407I	TGTACA	1 cut(s)	1331
Bsp1720I	GCTNAGC	2 cut(s)	133, 533
BspACI	CCGC	9 cut(s)	200, 274, 319, 388, 445, 514, 530, 1158, 1313
BspANI	GGCC	2 cut(s)	934, 1676
BspCNI	CTCAG	5 cut(s)	715, 772, 1037, 1189, 1507
BspFNI	CGCG	1 cut(s)	390
BspLI	GGNNCC	6 cut(s)	159, 290, 383, 926, 1110, 1245
BspMI	ACCTGC	3 cut(s)	528, 744, 1591
BspOI	GCTAGC	1 cut(s)	342
BspPI	GGATC	9 cut(s)	226, 349, 552, 787, 919, 932, 1103, 1116, 1372
BspQI	GCTCTTC	1 cut(s)	146
BsrDI	GCAATG	2 cut(s)	157, 1167
BsrGI	TGTACA	1 cut(s)	1331
BsrI	ACTGG	4 cut(s)	66, 247, 585, 928
BssECI	CCNNGG	5 cut(s)	326, 453, 1146, 1528, 1529
BssT1I	CCWWGG	2 cut(s)	453, 1146
Bst2UI	CCWGG	1 cut(s)	1530
Bst6I	CTCTTC	1 cut(s)	146
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstAUI	TGTACA	1 cut(s)	1331
BstBAI	YACGTR	1 cut(s)	435
BstC8I	GCNNGC	6 cut(s)	6, 323, 340, 411, 475, 1139
BstDEI	CTNAG	8 cut(s)	133, 533, 702, 780, 1024, 1197, 1494, 1638
BstDSI	CCRYGG	1 cut(s)	326
BstEII	GGTNACC	1 cut(s)	731
BstF5I	GGATG	3 cut(s)	674, 678, 1229
BstFNI	CGCG	1 cut(s)	390
BstH2I	RGCGCY	1 cut(s)	140
BstHHI	GCGC	3 cut(s)	107, 139, 150
BstMAI	GTCTC	4 cut(s)	705, 893, 1242, 1411
BstMWI	GCNNNNNNNGC	6 cut(s)	145, 266, 297, 406, 1166, 1597
BstNI	CCWGG	1 cut(s)	1530
BstPI	GGTNACC	1 cut(s)	731
BstSCI	CCNGG	2 cut(s)	223, 1528
BstSFI	CTRYAG	1 cut(s)	264
BstUI	CGCG	1 cut(s)	390
BstV1I	GCAGC	2 cut(s)	409, 925
BstV2I	GAAGAC	1 cut(s)	223
BstX2I	RGATCY	4 cut(s)	354, 924, 1108, 1171
BstXI	CCANNNNNNTGG	1 cut(s)	1240
BstYI	RGATCY	4 cut(s)	354, 924, 1108, 1171
BsuI	GTATCC	1 cut(s)	513
BsuRI	GGCC	2 cut(s)	934, 1676
BtgI	CCRYGG	1 cut(s)	326
BtrI	CACGTC	1 cut(s)	499
BtsCI	GGATG	3 cut(s)	674, 678, 1229
BtsIMutI	CAGTG	5 cut(s)	240, 320, 494, 935, 1037
BveI	ACCTGC	3 cut(s)	528, 744, 1591
Cac8I	GCNNGC	6 cut(s)	6, 323, 340, 411, 475, 1139
CfoI	GCGC	3 cut(s)	107, 139, 150
Cfr13I	GGNCC	5 cut(s)	157, 382, 438, 933, 1244
CseI	GACGC	1 cut(s)	1170
Csp6I	GTAC	2 cut(s)	485, 1332
CviAII	CATG	3 cut(s)	285, 367, 742
CviQI	GTAC	2 cut(s)	485, 1332
DdeI	CTNAG	8 cut(s)	133, 533, 702, 780, 1024, 1197, 1494, 1638
DraI	TTTAAA	1 cut(s)	1623
DrdI	GACNNNNNNGTC	1 cut(s)	729
DseDI	GACNNNNNNGTC	1 cut(s)	729
Eam1104I	CTCTTC	1 cut(s)	146
EarI	CTCTTC	1 cut(s)	146
Eco130I	CCWWGG	2 cut(s)	453, 1146
Eco47I	GGWCC	4 cut(s)	157, 382, 438, 1244
Eco47III	AGCGCT	1 cut(s)	138
Eco57I	CTGAAG	2 cut(s)	848, 1587
Eco72I	CACGTG	1 cut(s)	435
Eco91I	GGTNACC	1 cut(s)	731
EcoO109I	RGGNCCY	3 cut(s)	157, 382, 1244
EcoO65I	GGTNACC	1 cut(s)	731
EcoRII	CCWGG	1 cut(s)	1528
EcoT14I	CCWWGG	2 cut(s)	453, 1146
EcoT22I	ATGCAT	1 cut(s)	1436
ErhI	CCWWGG	2 cut(s)	453, 1146
FaeI	CATG	3 cut(s)	288, 370, 745
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FaqI	GGGAC	3 cut(s)	143, 509, 1511
FatI	CATG	3 cut(s)	284, 366, 741
FauI	CCCGC	1 cut(s)	521
FbaI	TGATCA	1 cut(s)	1065
FblI	GTMKAC	1 cut(s)	1443
Fnu4HI	GCNGC	4 cut(s)	319, 398, 914, 1158
FokI	GGATG	3 cut(s)	681, 685, 1216
Fsp4HI	GCNGC	4 cut(s)	319, 398, 914, 1158
FspBI	CTAG	3 cut(s)	44, 339, 1655
FspI	TGCGCA	1 cut(s)	106
GlaI	GCGC	3 cut(s)	106, 138, 149
GluI	GCNGC	4 cut(s)	319, 398, 914, 1158
GsaI	CCCAGC	1 cut(s)	1101
HaeII	RGCGCY	1 cut(s)	140
HaeIII	GGCC	2 cut(s)	934, 1676
HapII	CCGG	2 cut(s)	224, 1046
HgaI	GACGC	1 cut(s)	1170
HhaI	GCGC	3 cut(s)	107, 139, 150
Hin1II	CATG	3 cut(s)	288, 370, 745
Hin6I	GCGC	3 cut(s)	105, 137, 148
HinP1I	GCGC	3 cut(s)	105, 137, 148
HpaII	CCGG	2 cut(s)	224, 1046
HphI	GGTGA	5 cut(s)	442, 725, 956, 1066, 1497
Hpy166II	GTNNAC	2 cut(s)	1035, 1444
Hpy188III	TCNNGA	7 cut(s)	35, 53, 1026, 1204, 1247, 1349, 1655
Hpy8I	GTNNAC	2 cut(s)	1035, 1444
HpyAV	CCTTC	3 cut(s)	872, 1272, 1291
HpyCH4IV	ACGT	4 cut(s)	434, 498, 772, 1302
HpyCH4V	TGCA	6 cut(s)	4, 397, 1141, 1169, 1225, 1434
HpyF10VI	GCNNNNNNNGC	6 cut(s)	145, 266, 297, 406, 1166, 1597
HpyF3I	CTNAG	8 cut(s)	133, 533, 702, 780, 1024, 1197, 1494, 1638
HpySE526I	ACGT	4 cut(s)	434, 498, 772, 1302
Hsp92II	CATG	3 cut(s)	288, 370, 745
HspAI	GCGC	3 cut(s)	105, 137, 148
Ksp22I	TGATCA	1 cut(s)	1065
LguI	GCTCTTC	1 cut(s)	146
LmnI	GCTCC	4 cut(s)	288, 681, 1284, 1596
Lsp1109I	GCAGC	2 cut(s)	409, 925
LweI	GCATC	4 cut(s)	187, 317, 663, 1212
MaeI	CTAG	3 cut(s)	44, 339, 1655
MaeII	ACGT	4 cut(s)	434, 498, 772, 1302
MaeIII	GTNAC	4 cut(s)	731, 882, 1129, 1509
MboII	GAAGA	4 cut(s)	133, 223, 1597, 1606
MfeI	CAATTG	1 cut(s)	1422
MflI	RGATCY	4 cut(s)	354, 924, 1108, 1171
MluCI	AATT	5 cut(s)	1358, 1400, 1422, 1449, 1705
MlyI	GAGTC	4 cut(s)	237, 264, 1016, 1133
MmeI	TCCRAC	4 cut(s)	465, 522, 1136, 1297
Mph1103I	ATGCAT	1 cut(s)	1436
MseI	TTAA	6 cut(s)	420, 1017, 1071, 1176, 1389, 1622
MslI	CAYNNNNRTG	4 cut(s)	195, 313, 972, 1556
MspA1I	CMGCKG	2 cut(s)	463, 516
MspI	CCGG	2 cut(s)	224, 1046
MspR9I	CCNGG	2 cut(s)	225, 1530
MunI	CAATTG	1 cut(s)	1422
Mva1269I	GAATGC	2 cut(s)	751, 1171
MvaI	CCWGG	1 cut(s)	1530
MvnI	CGCG	1 cut(s)	390
MwoI	GCNNNNNNNGC	6 cut(s)	145, 266, 297, 406, 1166, 1597
NciI	CCSGG	1 cut(s)	225
NheI	GCTAGC	1 cut(s)	338
NlaIII	CATG	3 cut(s)	288, 370, 745
NlaIV	GGNNCC	6 cut(s)	159, 290, 383, 926, 1110, 1245
NmuCI	GTSAC	1 cut(s)	731
NsbI	TGCGCA	1 cut(s)	106
NsiI	ATGCAT	1 cut(s)	1436
OliI	CACNNNNGTG	1 cut(s)	1556
PaqCI	CACCTGC	1 cut(s)	744
PasI	CCCWGGG	1 cut(s)	1529
PciSI	GCTCTTC	1 cut(s)	146
PctI	GAATGC	2 cut(s)	751, 1171
PfeI	GAWTC	6 cut(s)	65, 237, 997, 1082, 1193, 1352
PflMI	CCANNNNNTGG	1 cut(s)	686
PkrI	GCNGC	4 cut(s)	320, 399, 915, 1159
PleI	GAGTC	4 cut(s)	236, 263, 1016, 1132
PmaCI	CACGTG	1 cut(s)	435
PmlI	CACGTG	1 cut(s)	435
PpsI	GAGTC	4 cut(s)	236, 263, 1016, 1132
Ppu21I	YACGTR	1 cut(s)	435
PpuMI	RGGWCCY	3 cut(s)	157, 382, 1244
Psp5II	RGGWCCY	3 cut(s)	157, 382, 1244
Psp6I	CCWGG	1 cut(s)	1528
PspCI	CACGTG	1 cut(s)	435
PspEI	GGTNACC	1 cut(s)	731
PspFI	CCCAGC	1 cut(s)	1097
PspGI	CCWGG	1 cut(s)	1528
PspN4I	GGNNCC	6 cut(s)	159, 290, 383, 926, 1110, 1245
PspPI	GGNCC	5 cut(s)	157, 382, 438, 933, 1244
PspPPI	RGGWCCY	3 cut(s)	157, 382, 1244
PsuI	RGATCY	4 cut(s)	354, 924, 1108, 1171
PvuII	CAGCTG	1 cut(s)	463
RsaI	GTAC	2 cut(s)	486, 1333
RsaNI	GTAC	2 cut(s)	485, 1332
RseI	CAYNNNNRTG	4 cut(s)	195, 313, 972, 1556
SapI	GCTCTTC	1 cut(s)	146
SaqAI	TTAA	6 cut(s)	420, 1017, 1071, 1176, 1389, 1622
SatI	GCNGC	4 cut(s)	319, 398, 914, 1158
Sau96I	GGNCC	5 cut(s)	157, 382, 438, 933, 1244
SchI	GAGTC	4 cut(s)	237, 264, 1016, 1133
ScrFI	CCNGG	2 cut(s)	225, 1530
SfaNI	GCATC	4 cut(s)	187, 317, 663, 1212
SfcI	CTRYAG	1 cut(s)	264
SinI	GGWCC	4 cut(s)	157, 382, 438, 1244
SmiMI	CAYNNNNRTG	4 cut(s)	195, 313, 972, 1556
SmlI	CTYRAG	2 cut(s)	1121, 1347
SmoI	CTYRAG	2 cut(s)	1121, 1347
Sse9I	AATT	5 cut(s)	1358, 1400, 1422, 1449, 1705
SsiI	CCGC	9 cut(s)	200, 274, 319, 388, 445, 514, 530, 1158, 1313
SspMI	CTAG	3 cut(s)	44, 339, 1655
StyD4I	CCNGG	2 cut(s)	223, 1528
StyI	CCWWGG	2 cut(s)	453, 1146
TaiI	ACGT	4 cut(s)	437, 501, 775, 1305
TaqI	TCGA	6 cut(s)	34, 90, 127, 172, 589, 595
TasI	AATT	5 cut(s)	1358, 1400, 1422, 1449, 1705
TatI	WGTACW	1 cut(s)	1331
TauI	GCSGC	2 cut(s)	321, 1160
TfiI	GAWTC	6 cut(s)	65, 237, 997, 1082, 1193, 1352
Tru1I	TTAA	6 cut(s)	420, 1017, 1071, 1176, 1389, 1622
Tru9I	TTAA	6 cut(s)	420, 1017, 1071, 1176, 1389, 1622
TscAI	CASTG	5 cut(s)	247, 320, 494, 935, 1037
TseFI	GTSAC	1 cut(s)	731
TseI	GCWGC	2 cut(s)	397, 913
Tsp45I	GTSAC	1 cut(s)	731
TspDTI	ATGAA	5 cut(s)	800, 833, 956, 1178, 1598
TspGWI	ACGGA	4 cut(s)	58, 267, 860, 1583
TspRI	CASTG	5 cut(s)	247, 320, 494, 935, 1037
Van91I	CCANNNNNTGG	1 cut(s)	686
VpaK11BI	GGWCC	4 cut(s)	157, 382, 438, 1244
XapI	RAATTY	1 cut(s)	1358
XbaI	TCTAGA	1 cut(s)	1654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	460
XmiI	GTMKAC	1 cut(s)	1443
XspI	CTAG	3 cut(s)	44, 339, 1655
Zsp2I	ATGCAT	1 cut(s)	1436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.