Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0009690

Physical Location & Seq

Genomic Coordinates Reverse (-)

10474857 .. 10479975

Gene Structure 5119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0133300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGGCGACAACAAGCGAAAACGAGGCCGTAAGCCCAAAACCCCCACCCCCGAAACCCTAGCCACCACAACCACAAGTACCACATCCGCCGCGGACGACGACGACGACGCCGTTTTCTCAGTCAGCAACGTCGAGATAATCGACCCCAAATGCCCCCGCCGCGGCCGCGGCCGCCCCAAGAAGCTCCCGAAGCTCTCCGAAAACGGCGACCACGACCCGCCCGCCCCGGCCGATTCGGATCCCGGAACGGCCTGGGAGGGCGGGGCGAGGGTGGTGCCGTCGATGGACGCGGTGGTGAAGGTGTTCTGCACGCACACCGAGCCGAATTTCTCGCTGCCGTGGCAGCGAAAGAGGCAGTACAGCTCGAGCAGCAGTGGGTTTGTGATTGGCGGCAGGAGGGTGCTCACCAATGCTCACTCAGTGGAGCATTACACCCAGGTCAAGCTCAAGAAGCGCGGCTCCGATACCAAGTACTTGGCCACTGTTCTTGCTATTGGCACCGAGTGTGACATTGCAATGCTTACGGTTGATGATGATGAGTTTTGGGAAGGTGTCTCACCGGTGGAGTTTGGGGAGTTGCCTGCGCTGCAAGATGCTGTTACTGTCGTGGGTTATCCGATTGGGGGTGACACAATTTCAGTGACGAGTGGCGTTGTATCGCGGATTGAGATTCTGTCGTATGTTCATGGGTCGACTGAACTGCTAGGTTTGCAGATAGATGCTGCGATCAACTCTGGAAACTCGGGTGGGCCTGCTTTTAATGATAAAGGAACTTGTGTGGGTATTGCATTTCAGTCCCTAAAACATGAGGATGCGGAGAATATTGGTTATGTCATACCCACACCAGTAATAATGCACTTCATCAAAGATTATGAGAAGAATGGAGCATATACAGGATTTCCAATTCTTGGGATTGAGTGGCAGAAAATGGAAAATCCTGATTTGCGTACATCAATGGGCATGAAACCTGATCAAAAGGGTGTTCGTATCAGAAGAATTGATCCCACTGCTCTGGAATCTCAGGTTTTGAAGCCATCTGATATTCTTCTCAGCTTTGATGGAGTTAATATTGCCAATGATGGAACAGTTCCTTTTCGGCATGGAGAACGCATAGGTTTTAGTTACCTCATATCCCAGAAATATACTGGGGATAACTCAAAGGTTAAAGTTCTGCGCAATTCTGAGATTCTCAGTTTTGATATAAAACTTGCATCCCACAAAAGACTAATTCCAGCACACATCAAGGGCAGACCTCCTTCATATTATATTGTTGCAGGATTTGTTTTCACAGCTGTATCTGTTCCCTATCTTCGATCCGAGTATGGAAAGGATTATGAGTTTGAAGCTCCTGTCAAACTTTTGGACAAAATGCTGCATTCCTTGCGGCAGTCACCGGATGAGCAGCTTGTAGTGGTTTCTCAGGTGCTTGTGGCTGATATCAACATTGGGTATGAAGACATAGTTAACACGCAGGTTCTTGCTTTTAATGGTAAGCCTGTGAAGAATCTAAAAGGCTTGGCCAGCATGGTAGAGAACTGTGAGGATGAGTTTTTGAAATTTGATTTAGAATACCAACAGATGGCAGTCCTCCGAACAAATACTGCAAAAGCAGCTACCCTAGATATTCTTGCTACACACTGCATACCGTCAGCAATGTCCGATGATTTGAAGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001817 GO:0001818 GO:0002682 GO:0002683 GO:0002697 GO:0002698 GO:0002831 GO:0002832 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0023057 GO:0030163 GO:0031347 GO:0031348 GO:0031984 GO:0032101 GO:0032102 GO:0032479 GO:0032480 GO:0032991 GO:0034098 GO:0036501 GO:0039531 GO:0039532 GO:0039535 GO:0039536 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045088 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050687 GO:0050688 GO:0050776 GO:0050789 GO:0050794 GO:0051117 GO:0051239 GO:0051241 GO:0051603 GO:0065007 GO:0071704 GO:0080134 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

UFD1

Protein Analysis

558

Amino Acids

61.17

Weight (kDa)

5.91

Isoelectric Point (pI)

41.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	107 - 287	4.5e-19	Trypsin
Trypsin_2	PF13365	125 - 262	1.6e-20	Trypsin-like peptidase domain
PDZ_3	PF17815	410 - 555	4.3e-48	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g23530
rosa_chinensis	RchiOBHm_Chr7g0212281 RchiOBHm_Chr7g0212841
rosa_laevigata	RLG00000002866 RLG00000002899
rosa_multiflora	Rmu_sc0000394.1_g000048 Rmu_sc0001911.1_g000048 Rmu_sc0013698.1_g000013 Rmu_sc0042115.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246520 Rroxscaffold_3G00246930
rosa_rugosa	Rorug07G0133300 Rorug07G0136900
rosa_samantha	Rh7AG265900 Rh7AG268500 Rh7BG264100 Rh7CG282800 Rh7CG287500 Rh7DG272800 Rh7DG276600
rosa_wichuraiana	Rw7G023200 Rw7G023320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1175
Acc36I	ACCTGC	1 cut(s)	1462
AccB1I	GGYRCC	2 cut(s)	274, 497
AccB7I	CCANNNNNTGG	2 cut(s)	908, 1579
AccI	GTMKAC	1 cut(s)	692
AccII	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
AclWI	GGATC	4 cut(s)	233, 246, 995, 1308
AcoI	YGGCCR	5 cut(s)	163, 169, 228, 477, 1518
AcsI	RAATTY	2 cut(s)	325, 1556
AcyI	GRCGYC	1 cut(s)	108
AdeI	CACNNNGTG	2 cut(s)	421, 504
AfaI	GTAC	4 cut(s)	79, 359, 473, 949
AfiI	CCNNNNNNNGG	4 cut(s)	161, 623, 908, 1579
AgeI	ACCGGT	1 cut(s)	559
AgsI	TTSAA	4 cut(s)	1030, 1343, 1555, 1669
AjnI	CCWGG	2 cut(s)	251, 435
AluBI	AGCT	9 cut(s)	184, 193, 363, 445, 1053, 1292, 1346, 1405, 1613
AluI	AGCT	9 cut(s)	184, 193, 363, 445, 1053, 1292, 1346, 1405, 1613
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	1 cut(s)	559
AlwI	GGATC	4 cut(s)	233, 246, 995, 1308
Ama87I	CYCGRG	2 cut(s)	364, 742
AoxI	GGCC	8 cut(s)	25, 163, 169, 228, 249, 477, 749, 1518
ApeKI	GCWGC	8 cut(s)	334, 343, 369, 586, 722, 1372, 1402, 1610
ApoI	RAATTY	2 cut(s)	325, 1556
AsiGI	ACCGGT	1 cut(s)	559
Asp700I	GAANNNNTTC	1 cut(s)	302
AspLEI	GCGC	3 cut(s)	456, 586, 1176
AspS9I	GGNCC	1 cut(s)	749
AsuC2I	CCSGG	2 cut(s)	227, 243
AsuHPI	GGTGA	5 cut(s)	307, 397, 549, 638, 1383
AvaI	CYCGRG	2 cut(s)	364, 742
BaeI	ACNNNNGTAYC	2 cut(s)	1278, 1311
BalI	TGGCCA	2 cut(s)	479, 1520
BamHI	GGATCC	1 cut(s)	238
BanI	GGYRCC	2 cut(s)	274, 497
BbsI	GAAGAC	1 cut(s)	1461
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	8 cut(s)	321, 355, 381, 573, 709, 1359, 1414, 1622
BccI	CCATC	5 cut(s)	277, 1042, 1052, 1073, 1573
BceAI	ACGGC	6 cut(s)	12, 95, 220, 262, 264, 322
BcgI	CGANNNNNNTGC	4 cut(s)	256, 290, 682, 716
BciT130I	CCWGG	2 cut(s)	253, 437
BclI	TGATCA	1 cut(s)	970
BcnI	CCSGG	2 cut(s)	227, 243
BcoDI	GTCTC	1 cut(s)	559
BfaI	CTAG	3 cut(s)	59, 704, 1619
BfuAI	ACCTGC	1 cut(s)	1462
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	4 cut(s)	227, 243, 253, 437
BmeT110I	CYCGRG	2 cut(s)	364, 742
BmgT120I	GGNCC	1 cut(s)	749
BmiI	GGNNCC	4 cut(s)	240, 276, 460, 499
BmrFI	CCNGG	4 cut(s)	227, 243, 253, 437
BmrI	ACTGGG	1 cut(s)	1155
BmsI	GCATC	4 cut(s)	583, 709, 802, 1220
BmuI	ACTGGG	1 cut(s)	1155
BpiI	GAAGAC	1 cut(s)	1461
BpuEI	CTTGAG	1 cut(s)	431
BpuMI	CCSGG	2 cut(s)	227, 243
BsaBI	GATNNNNATC	1 cut(s)	237
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	7 cut(s)	90, 160, 166, 225, 252, 338, 435
BsaWI	WCCGGW	2 cut(s)	559, 1393
Bsc4I	CCNNNNNNNGG	4 cut(s)	161, 623, 908, 1579
Bse118I	RCCGGY	1 cut(s)	559
Bse1I	ACTGG	2 cut(s)	845, 1150
Bse3DI	GCAATG	3 cut(s)	510, 522, 1659
Bse8I	GATNNNNATC	1 cut(s)	237
BseBI	CCWGG	2 cut(s)	253, 437
BseDI	CCNNGG	7 cut(s)	90, 160, 166, 225, 252, 338, 435
BseGI	GGATG	5 cut(s)	83, 817, 1211, 1402, 1549
BseJI	GATNNNNATC	1 cut(s)	237
BseLI	CCNNNNNNNGG	4 cut(s)	161, 623, 908, 1579
BseMI	GCAATG	3 cut(s)	510, 522, 1659
BseMII	CTCAG	7 cut(s)	132, 432, 1034, 1063, 1173, 1204, 1433
BseNI	ACTGG	2 cut(s)	845, 1150
BseX3I	CGGCCG	3 cut(s)	163, 169, 228
BseXI	GCAGC	8 cut(s)	321, 355, 381, 573, 709, 1359, 1414, 1622
BsgI	GTGCAG	1 cut(s)	292
Bsh1236I	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
Bsh1285I	CGRYCG	3 cut(s)	166, 172, 231
BshFI	GGCC	8 cut(s)	27, 165, 171, 230, 251, 479, 751, 1520
BshNI	GGYRCC	2 cut(s)	274, 497
BshTI	ACCGGT	1 cut(s)	559
BsiEI	CGRYCG	3 cut(s)	166, 172, 231
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	2 cut(s)	364, 742
BsiSI	CCGG	4 cut(s)	227, 243, 560, 1394
BslFI	GGGAC	1 cut(s)	781
BslI	CCNNNNNNNGG	4 cut(s)	161, 623, 908, 1579
BsmAI	GTCTC	1 cut(s)	559
BsmFI	GGGAC	1 cut(s)	781
BsmI	GAATGC	1 cut(s)	1375
BsnI	GGCC	8 cut(s)	27, 165, 171, 230, 251, 479, 751, 1520
BsoBI	CYCGRG	2 cut(s)	364, 742
Bsp1286I	GDGCHC	1 cut(s)	405
Bsp143I	GATC	5 cut(s)	238, 726, 970, 1000, 1313
BspANI	GGCC	8 cut(s)	27, 165, 171, 230, 251, 479, 751, 1520
BspCNI	CTCAG	7 cut(s)	131, 431, 1033, 1062, 1174, 1203, 1432
BspFNI	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
BspLI	GGNNCC	4 cut(s)	240, 276, 460, 499
BspMI	ACCTGC	1 cut(s)	1462
BspPI	GGATC	4 cut(s)	233, 246, 995, 1308
BspT107I	GGYRCC	2 cut(s)	274, 497
BsrDI	GCAATG	3 cut(s)	510, 522, 1659
BsrFI	RCCGGY	1 cut(s)	559
BsrI	ACTGG	2 cut(s)	845, 1150
BssAI	RCCGGY	1 cut(s)	559
BssECI	CCNNGG	7 cut(s)	90, 160, 166, 225, 252, 338, 435
BssMI	GATC	5 cut(s)	238, 726, 970, 1000, 1313
BssNI	GRCGYC	1 cut(s)	108
Bst2UI	CCWGG	2 cut(s)	253, 437
Bst4CI	ACNGT	6 cut(s)	484, 526, 604, 1087, 1538, 1647
BstACI	GRCGYC	1 cut(s)	108
BstAPI	GCANNNNNTGC	1 cut(s)	1381
BstC8I	GCNNGC	5 cut(s)	222, 311, 582, 753, 1522
BstDEI	CTNAG	7 cut(s)	118, 418, 1020, 1049, 1182, 1190, 1419
BstDSI	CCRYGG	4 cut(s)	90, 160, 166, 338
BstF5I	GGATG	5 cut(s)	83, 817, 1211, 1402, 1549
BstFNI	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
BstHHI	GCGC	3 cut(s)	456, 586, 1176
BstKTI	GATC	5 cut(s)	241, 729, 973, 1003, 1316
BstMAI	GTCTC	1 cut(s)	559
BstMBI	GATC	5 cut(s)	238, 726, 970, 1000, 1313
BstMCI	CGRYCG	3 cut(s)	166, 172, 231
BstNI	CCWGG	2 cut(s)	253, 437
BstSCI	CCNGG	4 cut(s)	225, 241, 251, 435
BstUI	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
BstV1I	GCAGC	8 cut(s)	321, 355, 381, 573, 709, 1359, 1414, 1622
BstV2I	GAAGAC	1 cut(s)	1461
BstX2I	RGATCY	1 cut(s)	238
BstXI	CCANNNNNNTGG	2 cut(s)	475, 1012
BstYI	RGATCY	1 cut(s)	238
BstZI	CGGCCG	3 cut(s)	163, 169, 228
BsuRI	GGCC	8 cut(s)	27, 165, 171, 230, 251, 479, 751, 1520
BtgI	CCRYGG	4 cut(s)	90, 160, 166, 338
BtsCI	GGATG	5 cut(s)	83, 817, 1211, 1402, 1549
BtsI	GCAGTG	3 cut(s)	379, 1005, 1636
BtsIMutI	CAGTG	6 cut(s)	379, 426, 480, 645, 1005, 1636
BveI	ACCTGC	1 cut(s)	1462
Cac8I	GCNNGC	5 cut(s)	222, 311, 582, 753, 1522
CciNI	GCGGCCGC	2 cut(s)	163, 169
CfoI	GCGC	3 cut(s)	456, 586, 1176
Cfr10I	RCCGGY	1 cut(s)	559
Cfr13I	GGNCC	1 cut(s)	749
Cfr42I	CCGCGG	3 cut(s)	93, 163, 169
CseI	GACGC	2 cut(s)	116, 296
Csp6I	GTAC	4 cut(s)	78, 358, 472, 948
CspAI	ACCGGT	1 cut(s)	559
CspCI	CAANNNNNGTGG	2 cut(s)	469, 504
CviAII	CATG	5 cut(s)	686, 806, 961, 1100, 1525
CviQI	GTAC	4 cut(s)	78, 358, 472, 948
DdeI	CTNAG	7 cut(s)	118, 418, 1020, 1049, 1182, 1190, 1419
DpnI	GATC	5 cut(s)	240, 728, 972, 1002, 1315
DpnII	GATC	5 cut(s)	238, 726, 970, 1000, 1313
DraIII	CACNNNGTG	2 cut(s)	421, 504
EaeI	YGGCCR	5 cut(s)	163, 169, 228, 477, 1518
EagI	CGGCCG	3 cut(s)	163, 169, 228
EciI	GGCGGA	1 cut(s)	76
EclXI	CGGCCG	3 cut(s)	163, 169, 228
Eco32I	GATATC	1 cut(s)	1438
Eco52I	CGGCCG	3 cut(s)	163, 169, 228
Eco88I	CYCGRG	2 cut(s)	364, 742
EcoRII	CCWGG	2 cut(s)	251, 435
EcoRV	GATATC	1 cut(s)	1438
FaeI	CATG	5 cut(s)	689, 809, 964, 1103, 1528
FaqI	GGGAC	1 cut(s)	781
FatI	CATG	5 cut(s)	685, 805, 960, 1099, 1524
FauI	CCCGC	4 cut(s)	164, 225, 229, 254
FbaI	TGATCA	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	692
FokI	GGATG	5 cut(s)	70, 824, 1198, 1409, 1556
FspBI	CTAG	3 cut(s)	59, 704, 1619
FspI	TGCGCA	1 cut(s)	1175
GlaI	GCGC	3 cut(s)	455, 585, 1175
HaeIII	GGCC	8 cut(s)	27, 165, 171, 230, 251, 479, 751, 1520
HapII	CCGG	4 cut(s)	227, 243, 560, 1394
HgaI	GACGC	2 cut(s)	116, 296
HhaI	GCGC	3 cut(s)	456, 586, 1176
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	5 cut(s)	689, 809, 964, 1103, 1528
Hin6I	GCGC	3 cut(s)	454, 584, 1174
HinP1I	GCGC	3 cut(s)	454, 584, 1174
HincII	GTYRAC	2 cut(s)	693, 1465
HindII	GTYRAC	2 cut(s)	693, 1465
HinfI	GANTC	5 cut(s)	233, 670, 1016, 1186, 1504
HpaI	GTTAAC	1 cut(s)	1465
HpaII	CCGG	4 cut(s)	227, 243, 560, 1394
HphI	GGTGA	5 cut(s)	307, 397, 549, 638, 1383
Hpy166II	GTNNAC	2 cut(s)	693, 1465
Hpy188III	TCNNGA	6 cut(s)	133, 187, 448, 735, 938, 1013
Hpy8I	GTNNAC	2 cut(s)	693, 1465
Hpy99I	CGWCG	6 cut(s)	101, 104, 107, 110, 134, 283
HpyAV	CCTTC	3 cut(s)	292, 542, 1266
HpyCH4III	ACNGT	6 cut(s)	484, 526, 604, 1087, 1538, 1647
HpyCH4IV	ACGT	1 cut(s)	129
HpyF3I	CTNAG	7 cut(s)	118, 418, 1020, 1049, 1182, 1190, 1419
HpySE526I	ACGT	1 cut(s)	129
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	5 cut(s)	689, 809, 964, 1103, 1528
HspAI	GCGC	3 cut(s)	454, 584, 1174
Ksp22I	TGATCA	1 cut(s)	970
KspAI	GTTAAC	1 cut(s)	1465
KspI	CCGCGG	3 cut(s)	93, 163, 169
Kzo9I	GATC	5 cut(s)	238, 726, 970, 1000, 1313
LmnI	GCTCC	5 cut(s)	189, 424, 464, 884, 1351
Lsp1109I	GCAGC	8 cut(s)	321, 355, 381, 573, 709, 1359, 1414, 1622
LweI	GCATC	4 cut(s)	583, 709, 802, 1220
MaeI	CTAG	3 cut(s)	59, 704, 1619
MaeII	ACGT	1 cut(s)	129
MaeIII	GTNAC	6 cut(s)	506, 598, 626, 640, 1121, 1389
MalI	GATC	5 cut(s)	240, 728, 972, 1002, 1315
MboI	GATC	5 cut(s)	238, 726, 970, 1000, 1313
MboII	GAAGA	6 cut(s)	889, 1005, 1037, 1301, 1466, 1513
MflI	RGATCY	1 cut(s)	238
MhlI	GDGCHC	1 cut(s)	405
MlsI	TGGCCA	2 cut(s)	479, 1520
MluCI	AATT	7 cut(s)	325, 633, 903, 996, 1177, 1227, 1556
MluNI	TGGCCA	2 cut(s)	479, 1520
Mox20I	TGGCCA	2 cut(s)	479, 1520
MroXI	GAANNNNTTC	1 cut(s)	302
MscI	TGGCCA	2 cut(s)	479, 1520
MseI	TTAA	5 cut(s)	759, 1065, 1164, 1464, 1485
MslI	CAYNNNNRTG	2 cut(s)	515, 810
Msp20I	TGGCCA	2 cut(s)	479, 1520
MspA1I	CMGCKG	4 cut(s)	92, 162, 168, 1292
MspI	CCGG	4 cut(s)	227, 243, 560, 1394
MspR9I	CCNGG	4 cut(s)	227, 243, 253, 437
Mva1269I	GAATGC	1 cut(s)	1375
MvaI	CCWGG	2 cut(s)	253, 437
MvnI	CGCG	6 cut(s)	92, 162, 168, 290, 456, 661
NciI	CCSGG	2 cut(s)	227, 243
NdeII	GATC	5 cut(s)	238, 726, 970, 1000, 1313
NlaIII	CATG	5 cut(s)	689, 809, 964, 1103, 1528
NlaIV	GGNNCC	4 cut(s)	240, 276, 460, 499
NmuCI	GTSAC	4 cut(s)	506, 626, 640, 1389
NotI	GCGGCCGC	2 cut(s)	163, 169
NsbI	TGCGCA	1 cut(s)	1175
PaeR7I	CTCGAG	1 cut(s)	364
PcsI	WCGNNNNNNNCGW	4 cut(s)	102, 108, 138, 210
PctI	GAATGC	1 cut(s)	1375
PdmI	GAANNNNTTC	1 cut(s)	302
PfeI	GAWTC	5 cut(s)	233, 670, 1016, 1186, 1504
PflMI	CCANNNNNTGG	2 cut(s)	908, 1579
PfoI	TCCNGGA	1 cut(s)	241
PinAI	ACCGGT	1 cut(s)	559
Psp6I	CCWGG	2 cut(s)	251, 435
PspGI	CCWGG	2 cut(s)	251, 435
PspN4I	GGNNCC	4 cut(s)	240, 276, 460, 499
PspPI	GGNCC	1 cut(s)	749
PspXI	VCTCGAGB	1 cut(s)	364
PsuI	RGATCY	1 cut(s)	238
PvuII	CAGCTG	1 cut(s)	1292
RsaI	GTAC	4 cut(s)	79, 359, 473, 949
RsaNI	GTAC	4 cut(s)	78, 358, 472, 948
RseI	CAYNNNNRTG	2 cut(s)	515, 810
SacII	CCGCGG	3 cut(s)	93, 163, 169
SalI	GTCGAC	1 cut(s)	691
SaqAI	TTAA	5 cut(s)	759, 1065, 1164, 1464, 1485
Sau3AI	GATC	5 cut(s)	238, 726, 970, 1000, 1313
Sau96I	GGNCC	1 cut(s)	749
ScaI	AGTACT	1 cut(s)	473
ScrFI	CCNGG	4 cut(s)	227, 243, 253, 437
SduI	GDGCHC	1 cut(s)	405
SfaNI	GCATC	4 cut(s)	583, 709, 802, 1220
Sfr274I	CTCGAG	1 cut(s)	364
Sfr303I	CCGCGG	3 cut(s)	93, 163, 169
SgrAI	CRCCGGYG	1 cut(s)	559
SgrBI	CCGCGG	3 cut(s)	93, 163, 169
SlaI	CTCGAG	1 cut(s)	364
SmiMI	CAYNNNNRTG	2 cut(s)	515, 810
SmlI	CTYRAG	2 cut(s)	364, 446
SmoI	CTYRAG	2 cut(s)	364, 446
Sse9I	AATT	7 cut(s)	325, 633, 903, 996, 1177, 1227, 1556
SspI	AATATT	2 cut(s)	823, 1069
SspMI	CTAG	3 cut(s)	59, 704, 1619
StyD4I	CCNGG	4 cut(s)	225, 241, 251, 435
TaaI	ACNGT	6 cut(s)	484, 526, 604, 1087, 1538, 1647
TaiI	ACGT	1 cut(s)	132
TaqI	TCGA	6 cut(s)	132, 141, 281, 365, 692, 1312
TasI	AATT	7 cut(s)	325, 633, 903, 996, 1177, 1227, 1556
TatI	WGTACW	2 cut(s)	357, 471
TauI	GCSGC	9 cut(s)	92, 162, 165, 168, 171, 174, 393, 459, 1387
TfiI	GAWTC	5 cut(s)	233, 670, 1016, 1186, 1504
Tru1I	TTAA	5 cut(s)	759, 1065, 1164, 1464, 1485
Tru9I	TTAA	5 cut(s)	759, 1065, 1164, 1464, 1485
TscAI	CASTG	6 cut(s)	379, 426, 487, 645, 1012, 1643
TseFI	GTSAC	4 cut(s)	506, 626, 640, 1389
TseI	GCWGC	8 cut(s)	334, 343, 369, 586, 722, 1372, 1402, 1610
Tsp45I	GTSAC	4 cut(s)	506, 626, 640, 1389
TspDTI	ATGAA	5 cut(s)	674, 850, 977, 1248, 1467
TspRI	CASTG	6 cut(s)	379, 426, 487, 645, 1012, 1643
Van91I	CCANNNNNTGG	2 cut(s)	908, 1579
XapI	RAATTY	2 cut(s)	325, 1556
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1142
XhoI	CTCGAG	1 cut(s)	364
XmiI	GTMKAC	1 cut(s)	692
XmnI	GAANNNNTTC	1 cut(s)	302
XspI	CTAG	3 cut(s)	59, 704, 1619
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.