Rorug07G0142600

poly ADP-ribose polymerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0019041
Physical Location & Seq
Forward (+)
11257725 .. 11260335
2611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0142600.1

Sequence Viewer

Length: 2337 bp
ATGGGGTATGATCACCAAGCTATTTCATCCCCAAATTTCCCTTCTTTTCTTATTTTCTGTTTCATCACTGTGTTTTTCTACTCTTCTGCAACTGCAAAAACCCTCAACACATTACAAAGAGGCTCTTCTCTCTCAGTGAAAAATGATGTATCAGACTTCCTGACTTCCCCAGACAACTCTTTCACATGTGGGTTCTATGGTGTAGGCACCAATGCCTACTGGTTCTCCATCTGGTTCACCCACTCCAGGGACAGAACCGTAATTTGGATGGCCAACAGAAACCGACCCGTTAATGGCTTGGGCTCCAGAACCTCACTGACCCGAGATGGCTCAATGGTCTTGACAGATGTGGATGGCATGCAAATCTGGTCTCCCAACCTCAACTCTAGTTCTGCCAACCTTGCTGAAAGGGCTGAGCTATTGAATTCTGGCAACCTTGTTTTGAGGGGCCCACAAGGTGAAATTCTATGGCAAAGCTTTGATTTTCCTACCAATACTCTTCTCCCTAACCAACTATTTACCAAGGGCATGAAGTTGGTCTCTAATATGTTAGGGAGAGGTAACTTTGGTAGTGGATATTATAGTTTCTATTTTGATAATGACAATGTGTTGAGGCTCATGTACGATGGTCCTGACATTTCAAGTCTTTATTGGCCAAATCCTGGTTATAGTGTGTTTGACAATGGTAGAACAAACTATAACAGTAGCAGAATTGCTGTTTTTGATGATTTGGGTCGTTTTTTGTCCAGTGATCTATGGCGGTTTCGTGCAAGTGACATGGGTTTGGGGCCGAAAAGGCGGTTGACTATAGATTATGATGGGAATTTGAGACTTTATAGTCTCAATTCAACAGGGTTTTGGGTGGTGACTTGGGAAGCTCTCATTCAGAGGTGTAGGGTTCACGGGATTTGTGGGAGAAATGGGATTTGTGTTTATACACCAGAGCCCAAATGTTCATGCCCTCCTGGCTATGAGGTGTTGGATAAAACTAACTGGAACAAAGGTTGCATCCCTAAGTTCAACCTTACATGCTCAGAGCCAGTGAAATTCCTTAAGATTCCAAATGTGGACTTTTTTGGATTTGATCTCAAATTCATGGAGTCCATTACCTTTAGCGCTTGCAGAAAACTCTGCGTAGATGATTGCCGGTGTCAAGCATTTCGTTACAAGCTAGCAGAAAAATCTACGACGACTCTGTGTTACACTAAAAATGCTCTTTTCAATGGGCACAAGTCTCCGTTTTACCCGGGCAGCATATACTTCAAACTACCTCTTAATGTGGATACATCACTACCTGCCAAGCTCAGTGTGACTGGTTCATGCATGAACAATGAGACCATGGCTGTGGTAGTAGGTTCTGCTTCAATGTATGACAAGAAAACTAAAAGGATGAGATGGGTGTATCTGTATTCTTTTGCTTCTGCAGTTGGTGTAGTTGAATTTTTTTTCATAGTATCAGGTTGGTACTTACTTTTCCGAAGACGTGGCGCTGTAGCTCCCACCTTGCAAGATGACTTTCGTCGGATTTCAAGTCATTTCAGAATGTATCTCTCTTCCGAGCTCAAGAAGGCAACTCAAAACTTCAAGGAAGAGTTGGGAAGAGGGTCTTCTGGGGTTGTGTATAAGGGTGTTCTAGAAGACCAAAGAGTTGTAGCTGTCAAGAAATTGGGAGATATTTATCATGCAGAAGATGTGTTTTGGGCAGAAGTAACCACAATCGGAAAAATCCATCACATGAATCTAGTGAGAACATGGGGATTCTGTTCAGAAAATAAACATAGGCTCCTGATCACTGAGTACATCGAAAATGGATCGTTGGACAAGCATTTGTTCTCTCCAGAGTGGGTTATACATTGTGATGTGAAGCCTGAAAATGTACTCCTAGACAGTGATTTTGAGCCAAAGATTGCGGATTTTGGGCTTGCAAAGTTATCTCAAAGAGGCAGCCGCGGTTCACAGTTCTCTCAAATGAGAGGAACAAAGGGGTACATGGCTCCAGAGTGGGCTTCTAACCTTCCAATCACTGCAAAAGTTGATGTGTACAGTTATGGAGTGGTGATTCTAGAGATAGTGAAGGGCATTCGGCTTTCAAATTGGGTGACGGAAGATGATGAGGAGATAGAAACAGAGATGACAAGGTTTATCAGAGTAGCGAAACATAGAATTCAAAGTGGAGAAGAGTCATGGATAGAGGATATGTTGGATCCAAGATTGGATGGTGAATACAGCAGGAACCAAGCAGCAAAGATGATTAAGATTGGTATTTCCTGCGTGGAGGAAGATCGGTCTAAAAGACCAACAATGGATGCAATAGTACAAATATTGCTAGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PARP RST

Protein Analysis

778

Amino Acids

88.43

Weight (kDa)

8.44

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 86 - 173 4.5e-21 D-mannose binding lectin
S_locus_glycop PF00954 266 - 325 7.3e-09 S-locus glycoprotein domain
Pkinase PF00069 528 - 610 1.2e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 528 - 610 2.7e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 609 - 773 6.3e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 616 - 775 1.2e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019041)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0213471
rosa_laevigata RLG00000002801
rosa_multiflora Rmu_co8493477.1_g000001
rosa_roxburghii Rroxscaffold_3G00245850
rosa_rugosa Rorug07G0142600
rosa_samantha Rh7AG274600 Rh7BG270100 Rh7CG293800 Rh7DG282100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 837
Acc36I ACCTGC 1 cut(s) 1303
AccB1I GGYRCC 1 cut(s) 206
AccB7I CCANNNNNTGG 1 cut(s) 662
AccII CGCG 1 cut(s) 1950
AciI CCGC 5 cut(s) 760, 799, 1910, 1948, 1950
AclWI GGATC 3 cut(s) 1819, 2198, 2211
AcoI YGGCCR 2 cut(s) 270, 653
AcsI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2163
AdeI CACNNNGTG 1 cut(s) 458
AfaI GTAC 7 cut(s) 623, 1466, 1799, 1878, 1988, 2042, 2316
AfeI AGCGCT 1 cut(s) 1117
AfiI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
AflII CTTAAG 1 cut(s) 1052
AflIII ACRYGT 1 cut(s) 185
AjiI CACGTC 1 cut(s) 1484
AjnI CCWGG 3 cut(s) 245, 661, 964
AjuI GAANNNNNNNTTGG 4 cut(s) 25, 57, 247, 279
AluBI AGCT 9 cut(s) 20, 418, 477, 878, 1171, 1303, 1496, 1561, 1655
AluI AGCT 9 cut(s) 20, 418, 477, 878, 1171, 1303, 1496, 1561, 1655
Alw21I GWGCWC 1 cut(s) 1563
Alw26I GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
AlwI GGATC 3 cut(s) 1819, 2198, 2211
Ama87I CYCGRG 2 cut(s) 321, 1246
Aor51HI AGCGCT 1 cut(s) 1117
AoxI GGCC 4 cut(s) 270, 448, 653, 788
ApaI GGGCCC 1 cut(s) 452
ApeKI GCWGC 3 cut(s) 1251, 1944, 2240
ApoI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2163
ArsI GACNNNNNNTTYG 2 cut(s) 1877, 1909
AspLEI GCGC 2 cut(s) 1118, 1490
AspS9I GGNCC 4 cut(s) 448, 449, 629, 788
AsuC2I CCSGG 2 cut(s) 1247, 1248
AsuHPI GGTGA 7 cut(s) 5, 229, 470, 877, 2068, 2110, 2231
AsuNHI GCTAGC 1 cut(s) 1171
AvaI CYCGRG 2 cut(s) 321, 1246
AvaII GGWCC 1 cut(s) 629
BaeGI GKGCMC 2 cut(s) 452, 1230
BalI TGGCCA 2 cut(s) 272, 655
BamHI GGATCC 1 cut(s) 2203
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 4 cut(s) 305, 452, 948, 1563
BbsI GAAGAC 3 cut(s) 1486, 1599, 1644
Bbv12I GWGCWC 1 cut(s) 1563
BbvI GCAGC 3 cut(s) 1263, 1956, 2252
BccI CCATC 9 cut(s) 236, 262, 320, 347, 620, 812, 1389, 1737, 2210
BciT130I CCWGG 3 cut(s) 247, 663, 966
BciVI GTATCC 1 cut(s) 1276
BclI TGATCA 2 cut(s) 10, 1788
BcnI CCSGG 2 cut(s) 1247, 1248
BcoDI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BfaI CTAG 7 cut(s) 387, 1172, 1634, 1742, 1883, 2063, 2327
BfmI CTRYAG 3 cut(s) 807, 1422, 1491
BfoI RGCGCY 2 cut(s) 1119, 1491
BfrI CTTAAG 1 cut(s) 1052
BfuAI ACCTGC 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 1276
BglI GCCNNNNNGGC 2 cut(s) 796, 966
BisI GCNGC 4 cut(s) 1252, 1945, 1948, 2241
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 4 cut(s) 1253, 1946, 1949, 2242
Bme1390I CCNGG 5 cut(s) 247, 663, 966, 1247, 1248
Bme18I GGWCC 1 cut(s) 629
BmeT110I CYCGRG 2 cut(s) 321, 1246
BmgBI CACGTC 1 cut(s) 1484
BmgT120I GGNCC 4 cut(s) 448, 449, 629, 788
BmiI GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 1995, 2205, 2234
BmrFI CCNGG 5 cut(s) 247, 663, 966, 1247, 1248
BmsI GCATC 2 cut(s) 1017, 2296
BmtI GCTAGC 1 cut(s) 1175
BoxI GACNNNNGTC 1 cut(s) 1518
BpiI GAAGAC 3 cut(s) 1486, 1599, 1644
BpmI CTGGAG 4 cut(s) 229, 289, 1821, 1980
Bpu1102I GCTNAGC 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 1547
BpuMI CCSGG 2 cut(s) 1247, 1248
BsaBI GATNNNNATC 1 cut(s) 1677
BsaI GGTCTC 3 cut(s) 375, 544, 1328
BsaJI CCNNGG 5 cut(s) 246, 522, 1246, 1338, 1948
BsaXI ACNNNNNCTCC 4 cut(s) 209, 239, 1767, 1797
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
Bse118I RCCGGY 1 cut(s) 1146
Bse1I ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
Bse8I GATNNNNATC 1 cut(s) 1677
BseBI CCWGG 3 cut(s) 247, 663, 966
BseDI CCNNGG 5 cut(s) 246, 522, 1246, 1338, 1948
BseGI GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2221, 2311
BseJI GATNNNNATC 1 cut(s) 1677
BseLI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BseMII CTCAG 5 cut(s) 147, 405, 1047, 1318, 1785
BseNI ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
BseRI GAGGAG 1 cut(s) 2129
BseSI GKGCMC 2 cut(s) 452, 1230
BseXI GCAGC 3 cut(s) 1263, 1956, 2252
Bsh1236I CGCG 1 cut(s) 1950
BshFI GGCC 4 cut(s) 272, 450, 655, 790
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 1 cut(s) 1563
BsiHKCI CYCGRG 2 cut(s) 321, 1246
BsiSI CCGG 2 cut(s) 1147, 1247
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BsmAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BsmFI GGGAC 1 cut(s) 263
BsmI GAATGC 1 cut(s) 2079
BsnI GGCC 4 cut(s) 272, 450, 655, 790
Bso31I GGTCTC 3 cut(s) 375, 544, 1328
BsoBI CYCGRG 2 cut(s) 321, 1246
Bsp120I GGGCCC 1 cut(s) 448
Bsp1286I GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
Bsp1407I TGTACA 1 cut(s) 2040
Bsp143I GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 5 cut(s) 760, 799, 1910, 1948, 1950
BspANI GGCC 4 cut(s) 272, 450, 655, 790
BspCNI CTCAG 5 cut(s) 146, 406, 1046, 1317, 1786
BspFNI CGCG 1 cut(s) 1950
BspLI GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 1995, 2205, 2234
BspMAI CTGCAG 1 cut(s) 1426
BspMI ACCTGC 1 cut(s) 1303
BspOI GCTAGC 1 cut(s) 1175
BspPI GGATC 3 cut(s) 1819, 2198, 2211
BspQI GCTCTTC 1 cut(s) 130
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 1 cut(s) 1052
BspTNI GGTCTC 3 cut(s) 375, 544, 1328
BsrFI RCCGGY 1 cut(s) 1146
BsrGI TGTACA 1 cut(s) 2040
BsrI ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
BssAI RCCGGY 1 cut(s) 1146
BssECI CCNNGG 5 cut(s) 246, 522, 1246, 1338, 1948
BssMI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
BssT1I CCWWGG 2 cut(s) 522, 1338
Bst2UI CCWGG 3 cut(s) 247, 663, 966
Bst4CI ACNGT 6 cut(s) 70, 259, 704, 1889, 1959, 2045
Bst6I CTCTTC 7 cut(s) 88, 130, 504, 1558, 1584, 1594, 2172
BstAFI CTTAAG 1 cut(s) 1052
BstAUI TGTACA 1 cut(s) 2040
BstC8I GCNNGC 4 cut(s) 359, 1120, 1173, 1923
BstDEI CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
BstDSI CCRYGG 2 cut(s) 1338, 1948
BstF5I GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2221, 2311
BstFNI CGCG 1 cut(s) 1950
BstH2I RGCGCY 2 cut(s) 1119, 1491
BstHHI GCGC 2 cut(s) 1118, 1490
BstKTI GATC 7 cut(s) 13, 754, 1087, 1791, 1814, 2206, 2284
BstMAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BstMBI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
BstMWI GCNNNNNNNGC 4 cut(s) 401, 410, 796, 966
BstNI CCWGG 3 cut(s) 247, 663, 966
BstNSI RCATGY 3 cut(s) 189, 361, 1032
BstPAI GACNNNNGTC 1 cut(s) 1518
BstSCI CCNGG 5 cut(s) 245, 661, 964, 1245, 1246
BstSFI CTRYAG 3 cut(s) 807, 1422, 1491
BstSLI GKGCMC 2 cut(s) 452, 1230
BstUI CGCG 1 cut(s) 1950
BstV1I GCAGC 3 cut(s) 1263, 1956, 2252
BstV2I GAAGAC 3 cut(s) 1486, 1599, 1644
BstX2I RGATCY 1 cut(s) 2203
BstXI CCANNNNNNTGG 1 cut(s) 1345
BstYI RGATCY 1 cut(s) 2203
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 4 cut(s) 272, 450, 655, 790
BtgI CCRYGG 2 cut(s) 1338, 1948
BtrI CACGTC 1 cut(s) 1484
BtsCI GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2221, 2311
BtsI GCAGTG 1 cut(s) 2022
BtsIMutI CAGTG 9 cut(s) 66, 141, 314, 754, 1047, 1312, 1791, 1894, 2022
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 4 cut(s) 359, 1120, 1173, 1923
CfoI GCGC 2 cut(s) 1118, 1490
Cfr10I RCCGGY 1 cut(s) 1146
Cfr13I GGNCC 4 cut(s) 448, 449, 629, 788
Cfr42I CCGCGG 1 cut(s) 1951
Cfr9I CCCGGG 1 cut(s) 1246
Csp6I GTAC 7 cut(s) 622, 1465, 1798, 1877, 1987, 2041, 2315
CviQI GTAC 7 cut(s) 622, 1465, 1798, 1877, 1987, 2041, 2315
DdeI CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
DpnI GATC 7 cut(s) 12, 753, 1086, 1790, 1813, 2205, 2283
DpnII GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
DraIII CACNNNGTG 1 cut(s) 458
DrdI GACNNNNNNGTC 1 cut(s) 837
DseDI GACNNNNNNGTC 1 cut(s) 837
EaeI YGGCCR 2 cut(s) 270, 653
Eam1104I CTCTTC 7 cut(s) 88, 130, 504, 1558, 1584, 1594, 2172
EarI CTCTTC 7 cut(s) 88, 130, 504, 1558, 1584, 1594, 2172
Ecl136II GAGCTC 1 cut(s) 1561
Eco130I CCWWGG 2 cut(s) 522, 1338
Eco24I GRGCYC 4 cut(s) 305, 452, 948, 1563
Eco31I GGTCTC 3 cut(s) 375, 544, 1328
Eco47I GGWCC 1 cut(s) 629
Eco47III AGCGCT 1 cut(s) 1117
Eco53kI GAGCTC 1 cut(s) 1561
Eco88I CYCGRG 2 cut(s) 321, 1246
EcoICRI GAGCTC 1 cut(s) 1561
EcoO109I RGGNCCY 1 cut(s) 448
EcoRI GAATTC 2 cut(s) 424, 2163
EcoRII CCWGG 3 cut(s) 245, 661, 964
EcoT14I CCWWGG 2 cut(s) 522, 1338
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 4 cut(s) 305, 452, 948, 1563
ErhI CCWWGG 2 cut(s) 522, 1338
FalI AAGNNNNNCTT 4 cut(s) 109, 141, 1591, 1623
FaqI GGGAC 1 cut(s) 263
FbaI TGATCA 2 cut(s) 10, 1788
Fnu4HI GCNGC 4 cut(s) 1252, 1945, 1948, 2241
FokI GGATG 7 cut(s) 13, 280, 365, 995, 1402, 2228, 2318
FriOI GRGCYC 4 cut(s) 305, 452, 948, 1563
Fsp4HI GCNGC 4 cut(s) 1252, 1945, 1948, 2241
FspBI CTAG 7 cut(s) 387, 1172, 1634, 1742, 1883, 2063, 2327
GlaI GCGC 2 cut(s) 1117, 1489
GluI GCNGC 4 cut(s) 1252, 1945, 1948, 2241
GsuI CTGGAG 4 cut(s) 229, 289, 1821, 1980
HaeII RGCGCY 2 cut(s) 1119, 1491
HaeIII GGCC 4 cut(s) 272, 450, 655, 790
HapII CCGG 2 cut(s) 1147, 1247
HhaI GCGC 2 cut(s) 1118, 1490
Hin6I GCGC 2 cut(s) 1116, 1488
HinP1I GCGC 2 cut(s) 1116, 1488
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HindIII AAGCTT 1 cut(s) 475
HinfI GANTC 7 cut(s) 1057, 1100, 1192, 1738, 1758, 2059, 2180
HpaII CCGG 2 cut(s) 1147, 1247
HphI GGTGA 7 cut(s) 5, 229, 470, 877, 2068, 2110, 2231
Hpy166II GTNNAC 6 cut(s) 237, 804, 901, 1069, 1955, 2041
Hpy8I GTNNAC 6 cut(s) 237, 804, 901, 1069, 1955, 2041
Hpy99I CGWCG 2 cut(s) 1192, 1524
HpyAV CCTTC 4 cut(s) 51, 1561, 2024, 2068
HpyCH4III ACNGT 6 cut(s) 70, 259, 704, 1889, 1959, 2045
HpyCH4IV ACGT 1 cut(s) 1483
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 410, 796, 966
HpyF3I CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
HpySE526I ACGT 1 cut(s) 1483
HspAI GCGC 2 cut(s) 1116, 1488
Ksp22I TGATCA 2 cut(s) 10, 1788
KspI CCGCGG 1 cut(s) 1951
Kzo9I GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 4 cut(s) 308, 1501, 1788, 1999
Lsp1109I GCAGC 3 cut(s) 1263, 1956, 2252
LweI GCATC 2 cut(s) 1017, 2296
MaeI CTAG 7 cut(s) 387, 1172, 1634, 1742, 1883, 2063, 2327
MaeII ACGT 1 cut(s) 1483
MaeIII GTNAC 8 cut(s) 560, 773, 865, 1163, 1199, 1309, 1708, 2098
MalI GATC 7 cut(s) 12, 753, 1086, 1790, 1813, 2205, 2283
MboI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
MflI RGATCY 1 cut(s) 2203
MhlI GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
MlsI TGGCCA 2 cut(s) 272, 655
MluNI TGGCCA 2 cut(s) 272, 655
MlyI GAGTC 3 cut(s) 1109, 1186, 2189
MmeI TCCRAC 4 cut(s) 960, 1502, 1797, 2181
Mox20I TGGCCA 2 cut(s) 272, 655
Mph1103I ATGCAT 1 cut(s) 1325
MscI TGGCCA 2 cut(s) 272, 655
MseI TTAA 5 cut(s) 291, 1053, 1275, 2253, 2335
MslI CAYNNNNRTG 3 cut(s) 68, 1343, 1857
Msp20I TGGCCA 2 cut(s) 272, 655
MspA1I CMGCKG 1 cut(s) 1950
MspCI CTTAAG 1 cut(s) 1052
MspI CCGG 2 cut(s) 1147, 1247
MspR9I CCNGG 5 cut(s) 247, 663, 966, 1247, 1248
Mva1269I GAATGC 1 cut(s) 2079
MvaI CCWGG 3 cut(s) 247, 663, 966
MvnI CGCG 1 cut(s) 1950
MwoI GCNNNNNNNGC 4 cut(s) 401, 410, 796, 966
NciI CCSGG 2 cut(s) 1247, 1248
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
NheI GCTAGC 1 cut(s) 1171
NlaIV GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 1995, 2205, 2234
NmuCI GTSAC 4 cut(s) 773, 865, 1309, 2098
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 3 cut(s) 189, 361, 1032
PaeI GCATGC 1 cut(s) 361
PciI ACATGT 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 130
PctI GAATGC 1 cut(s) 2079
PfeI GAWTC 4 cut(s) 1057, 1738, 1758, 2059
PflMI CCANNNNNTGG 1 cut(s) 662
PkrI GCNGC 4 cut(s) 1253, 1946, 1949, 2242
PleI GAGTC 3 cut(s) 1108, 1186, 2188
PpsI GAGTC 3 cut(s) 1108, 1186, 2188
PscI ACATGT 1 cut(s) 185
PshAI GACNNNNGTC 1 cut(s) 1518
Psp124BI GAGCTC 1 cut(s) 1563
Psp6I CCWGG 3 cut(s) 245, 661, 964
PspGI CCWGG 3 cut(s) 245, 661, 964
PspN4I GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 1995, 2205, 2234
PspOMI GGGCCC 1 cut(s) 448
PspPI GGNCC 4 cut(s) 448, 449, 629, 788
PstI CTGCAG 1 cut(s) 1426
PsuI RGATCY 1 cut(s) 2203
RsaI GTAC 7 cut(s) 623, 1466, 1799, 1878, 1988, 2042, 2316
RsaNI GTAC 7 cut(s) 622, 1465, 1798, 1877, 1987, 2041, 2315
RseI CAYNNNNRTG 3 cut(s) 68, 1343, 1857
SacI GAGCTC 1 cut(s) 1563
SacII CCGCGG 1 cut(s) 1951
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 5 cut(s) 291, 1053, 1275, 2253, 2335
SatI GCNGC 4 cut(s) 1252, 1945, 1948, 2241
Sau3AI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2203, 2281
Sau96I GGNCC 4 cut(s) 448, 449, 629, 788
SchI GAGTC 3 cut(s) 1109, 1186, 2189
ScrFI CCNGG 5 cut(s) 247, 663, 966, 1247, 1248
SduI GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
SfaNI GCATC 2 cut(s) 1017, 2296
SfcI CTRYAG 3 cut(s) 807, 1422, 1491
Sfr303I CCGCGG 1 cut(s) 1951
SgrBI CCGCGG 1 cut(s) 1951
SinI GGWCC 1 cut(s) 629
SmaI CCCGGG 1 cut(s) 1248
SmiMI CAYNNNNRTG 3 cut(s) 68, 1343, 1857
SmlI CTYRAG 2 cut(s) 1052, 1562
SmoI CTYRAG 2 cut(s) 1052, 1562
SphI GCATGC 1 cut(s) 361
SsiI CCGC 5 cut(s) 760, 799, 1910, 1948, 1950
SspI AATATT 1 cut(s) 2322
SspMI CTAG 7 cut(s) 387, 1172, 1634, 1742, 1883, 2063, 2327
SstI GAGCTC 1 cut(s) 1563
StyD4I CCNGG 5 cut(s) 245, 661, 964, 1245, 1246
StyI CCWWGG 2 cut(s) 522, 1338
TaaI ACNGT 6 cut(s) 70, 259, 704, 1889, 1959, 2045
TaiI ACGT 1 cut(s) 1486
TaqI TCGA 1 cut(s) 1803
TaqII GACCGA 1 cut(s) 2274
TatI WGTACW 4 cut(s) 1797, 1876, 2040, 2314
TauI GCSGC 1 cut(s) 1950
TfiI GAWTC 4 cut(s) 1057, 1738, 1758, 2059
Tru1I TTAA 5 cut(s) 291, 1053, 1275, 2253, 2335
Tru9I TTAA 5 cut(s) 291, 1053, 1275, 2253, 2335
TscAI CASTG 9 cut(s) 73, 141, 321, 754, 1047, 1312, 1798, 1894, 2029
TseFI GTSAC 4 cut(s) 773, 865, 1309, 2098
TseI GCWGC 3 cut(s) 1251, 1944, 2240
Tsp45I GTSAC 4 cut(s) 773, 865, 1309, 2098
TspDTI ATGAA 9 cut(s) 15, 52, 545, 945, 1084, 1308, 1340, 1438, 1751
TspGWI ACGGA 2 cut(s) 1227, 2117
TspMI CCCGGG 1 cut(s) 1246
TspRI CASTG 9 cut(s) 73, 141, 321, 754, 1047, 1312, 1798, 1894, 2029
Van91I CCANNNNNTGG 1 cut(s) 662
Vha464I CTTAAG 1 cut(s) 1052
VpaK11BI GGWCC 1 cut(s) 629
XapI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2163
XbaI TCTAGA 2 cut(s) 1633, 2062
XceI RCATGY 3 cut(s) 189, 361, 1032
XmaI CCCGGG 1 cut(s) 1246
XspI CTAG 7 cut(s) 387, 1172, 1634, 1742, 1883, 2063, 2327
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.