Rorug07G0228700

Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
20924387 .. 20925303
917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0228700.1

Sequence Viewer

Length: 390 bp
ATGAGCGGACACTCCTCATCAGCGGCCTTTCTGTTAGCAATGATGATGGTGATGATGACAATGTTCATCACCAAAACTGATTGCTTCAGCATCAACCAGACAATCACCGTCTCCTCTACTTGGTGCGATGGCCTCAACGACGACTTGTCGTGTCTAATTGGACAAACTGATTTGGATTCGGACGAGTTCATGCTGGACTCCGAATTCAGCAGAAGAATCCTGGTTGCAGGTCAAGGATCTTACTCTGGTAAGACCTTGAATGCTGGAACGGCTGTGTCGTGTGACCGAACTGGGTTTCCTCCGTGCCACACTAGCGGGGGAAACAAGAACCCCCCACCAGCACACTGCAACAAGGCGCCCACCAATCGAGATTGCTACGGCTATTCCTAA

Protein Analysis

129

Amino Acids

13.86

Weight (kDa)

5.05

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 355
AccBSI CCGCTC 1 cut(s) 6
AciI CCGC 3 cut(s) 6, 23, 315
AclWI GGATC 1 cut(s) 244
AcsI RAATTY 1 cut(s) 203
AcuI CTGAAG 1 cut(s) 70
AcyI GRCGYC 1 cut(s) 356
AfiI CCNNNNNNNGG 1 cut(s) 120
AgsI TTSAA 1 cut(s) 259
AhdI GACNNNNNGTC 1 cut(s) 145
AjnI CCWGG 1 cut(s) 219
AloI GAACNNNNNNTCC 2 cut(s) 280, 312
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 1 cut(s) 244
AoxI GGCC 2 cut(s) 24, 130
ApoI RAATTY 1 cut(s) 203
AspLEI GCGC 1 cut(s) 358
AsuHPI GGTGA 3 cut(s) 61, 61, 97
BanI GGYRCC 1 cut(s) 355
BccI CCATC 2 cut(s) 40, 122
BceAI ACGGC 1 cut(s) 285
BciT130I CCWGG 1 cut(s) 221
BcoDI GTCTC 1 cut(s) 115
BfaI CTAG 1 cut(s) 312
BfoI RGCGCY 1 cut(s) 359
BfuAI ACCTGC 1 cut(s) 218
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
Bme1390I CCNGG 1 cut(s) 221
BmeRI GACNNNNNGTC 1 cut(s) 145
BmiI GGNNCC 1 cut(s) 357
BmrFI CCNGG 1 cut(s) 221
BmrI ACTGGG 1 cut(s) 300
BmsI GCATC 1 cut(s) 99
BmuI ACTGGG 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 356
Bsc4I CCNNNNNNNGG 1 cut(s) 120
Bse1I ACTGG 1 cut(s) 295
Bse3DI GCAATG 1 cut(s) 45
BseBI CCWGG 1 cut(s) 221
BseLI CCNNNNNNNGG 1 cut(s) 120
BseMI GCAATG 1 cut(s) 45
BseNI ACTGG 1 cut(s) 295
BseRI GAGGAG 2 cut(s) 4, 103
BshFI GGCC 2 cut(s) 26, 132
BshNI GGYRCC 1 cut(s) 355
BslI CCNNNNNNNGG 1 cut(s) 120
BsmAI GTCTC 1 cut(s) 115
BsmBI CGTCTC 1 cut(s) 115
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 2 cut(s) 26, 132
Bsp143I GATC 1 cut(s) 236
BspACI CCGC 3 cut(s) 6, 23, 315
BspANI GGCC 2 cut(s) 26, 132
BspLI GGNNCC 1 cut(s) 357
BspMI ACCTGC 1 cut(s) 218
BspPI GGATC 1 cut(s) 244
BspT107I GGYRCC 1 cut(s) 355
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 1 cut(s) 295
BssMI GATC 1 cut(s) 236
BssNI GRCGYC 1 cut(s) 356
Bst2UI CCWGG 1 cut(s) 221
Bst4CI ACNGT 1 cut(s) 109
BstACI GRCGYC 1 cut(s) 356
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 1 cut(s) 239
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 1 cut(s) 236
BstMWI GCNNNNNNNGC 2 cut(s) 269, 312
BstNI CCWGG 1 cut(s) 221
BstSCI CCNGG 1 cut(s) 219
BstX2I RGATCY 1 cut(s) 236
BstYI RGATCY 1 cut(s) 236
BsuRI GGCC 2 cut(s) 26, 132
BtgZI GCGATG 1 cut(s) 141
BtsI GCAGTG 1 cut(s) 343
BtsIMutI CAGTG 1 cut(s) 343
BveI ACCTGC 1 cut(s) 218
CfoI GCGC 1 cut(s) 358
CviAII CATG 1 cut(s) 190
CviJI RGCY 4 cut(s) 26, 132, 272, 381
CviKI_1 RGCY 4 cut(s) 26, 132, 272, 381
DinI GGCGCC 1 cut(s) 357
DpnI GATC 1 cut(s) 238
DpnII GATC 1 cut(s) 236
DriI GACNNNNNGTC 1 cut(s) 145
Eam1105I GACNNNNNGTC 1 cut(s) 145
Eco57I CTGAAG 1 cut(s) 70
EcoRI GAATTC 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 219
EgeI GGCGCC 1 cut(s) 357
EheI GGCGCC 1 cut(s) 357
Esp3I CGTCTC 1 cut(s) 115
FaeI CATG 1 cut(s) 193
FaiI YATR 1 cut(s) 191
FatI CATG 1 cut(s) 189
FauI CCCGC 1 cut(s) 308
Fnu4HI GCNGC 1 cut(s) 24
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 1 cut(s) 312
GlaI GCGC 1 cut(s) 357
GluI GCNGC 1 cut(s) 24
HaeII RGCGCY 1 cut(s) 359
HaeIII GGCC 2 cut(s) 26, 132
HhaI GCGC 1 cut(s) 358
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 1 cut(s) 193
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HinfI GANTC 3 cut(s) 176, 197, 216
HphI GGTGA 3 cut(s) 61, 61, 97
Hpy188I TCNGA 2 cut(s) 181, 202
Hpy188III TCNNGA 1 cut(s) 368
Hpy99I CGWCG 1 cut(s) 143
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4V TGCA 2 cut(s) 227, 348
HpyF10VI GCNNNNNNNGC 2 cut(s) 269, 312
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 1 cut(s) 193
HspAI GCGC 1 cut(s) 356
KasI GGCGCC 1 cut(s) 355
Kzo9I GATC 1 cut(s) 236
LpnPI CCDG 9 cut(s) 110, 179, 206, 213, 231, 233, 249, 276, 351
LweI GCATC 1 cut(s) 99
MaeI CTAG 1 cut(s) 312
MaeIII GTNAC 1 cut(s) 281
MalI GATC 1 cut(s) 238
MbiI CCGCTC 1 cut(s) 6
MboI GATC 1 cut(s) 236
MboII GAAGA 1 cut(s) 225
MflI RGATCY 1 cut(s) 236
MluCI AATT 2 cut(s) 156, 203
Mly113I GGCGCC 1 cut(s) 356
MlyI GAGTC 1 cut(s) 191
MnlI CCTC 4 cut(s) 25, 124, 143, 309
MspA1I CMGCKG 1 cut(s) 23
MspR9I CCNGG 1 cut(s) 221
Mva1269I GAATGC 1 cut(s) 265
MvaI CCWGG 1 cut(s) 221
MwoI GCNNNNNNNGC 2 cut(s) 269, 312
NarI GGCGCC 1 cut(s) 356
NdeII GATC 1 cut(s) 236
NlaIII CATG 1 cut(s) 193
NlaIV GGNNCC 1 cut(s) 357
NmuCI GTSAC 1 cut(s) 281
PcsI WCGNNNNNNNCGW 1 cut(s) 275
PctI GAATGC 1 cut(s) 265
PfeI GAWTC 2 cut(s) 176, 216
PkrI GCNGC 1 cut(s) 25
PleI GAGTC 1 cut(s) 191
PluTI GGCGCC 1 cut(s) 359
PpsI GAGTC 1 cut(s) 191
Psp6I CCWGG 1 cut(s) 219
PspGI CCWGG 1 cut(s) 219
PspN4I GGNNCC 1 cut(s) 357
PsuI RGATCY 1 cut(s) 236
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 1 cut(s) 236
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 1 cut(s) 221
SetI ASST 2 cut(s) 232, 257
SfaNI GCATC 1 cut(s) 99
SfoI GGCGCC 1 cut(s) 357
Sse9I AATT 2 cut(s) 156, 203
SsiI CCGC 3 cut(s) 6, 23, 315
SspDI GGCGCC 1 cut(s) 355
SspMI CTAG 1 cut(s) 312
StyD4I CCNGG 1 cut(s) 219
TaaI ACNGT 1 cut(s) 109
TaqI TCGA 1 cut(s) 367
TaqII GACCGA 1 cut(s) 300
TasI AATT 2 cut(s) 156, 203
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 2 cut(s) 176, 216
TscAI CASTG 1 cut(s) 350
TseFI GTSAC 1 cut(s) 281
Tsp45I GTSAC 1 cut(s) 281
TspDTI ATGAA 2 cut(s) 55, 178
TspGWI ACGGA 1 cut(s) 291
TspRI CASTG 1 cut(s) 350
XapI RAATTY 1 cut(s) 203
XspI CTAG 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.