Rw7G031600

Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
45371961 .. 45383831
11871 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G031600.1

Sequence Viewer

Length: 1998 bp
ATGGGGCAGGAAAGCTCCAAAGAAGACACTGGTGTTTCTTCAGCTTCAGAGTCGTCCTCCAAAGCAGGAGGAGGAGGAGGATCCCGTCGGTCTCGCCTGAAGCAGCGACTGCACCGTCGGCGTCACCGGAGTCGCTCCAATTCCTCGTCTCATCACAAATGCCTCGCCGCCGAGGATTTCGTCGGAATCGCTCTCCTCACTCTCGTTCGAGCTGAAATGAAGTTCAAGGACAAGTGGCTGGCTTGTCTTTCCTTTGGAGAGCAAACCTTTCGTACACAGATCTCTGATCAAACAGACAAACCTGTTTGGAATTCTGCAAAGAAGCTTTGTCTGGACAAAAATGGGCCTCGTTTTGCAAGGATCTCAGTGTATGAGACGAATAAAATGTATAAGAACACTCTGATAGGATTTTGTGAGATTGATCTACTTGAATTTCTAACCAGGGAATTAGAATCCGATTCCAGTTCCGAGTGTGAGACATTGAACCTGTTAGATCCATCATCACCAGACAAAGTCGTGGGAGAAATATCTGTTTCAATATCTGTTGAGGACCCAATTGAAACAGAAAAGAGTTTTGCAAGACGCATTTTATCCATAGTGGACTACAATGAAGATGGACACCTTTCATTGTCTGAATTTTCTGACTTAATTACTGCTTTTGGGAATCAAGTGGCAGCGAACAAGAAAGAGGAGATGTTTAAAGCAGCTGACAAGAACGGGGATGGTGCTGTTAGCATGGATGAGTTGGCTGACCTTCTTGCCATTCAACAAGAAAAGGAACCACTAATCAATTGCTGTCCTGTTTGTGGCGAGACTCTTGAAGATTCTGATACGCTGAACCACATGATTCATTTGACCCTATGTTTTGATGAAGGAACTGGAAAACAGGTTATGACTGGAGGATTTTTGACAGATAAACAGGCTAATTATGGGTGGATGTTTAAGCTTAGTGAATGGGCCCATTTTTCATCCTATGACATTGGTTTAAACTCTGGATCAAGTAGTTCCCATATTCTGGTATTTGATCGGAGGACAAAGAGACTTGTGGAAGAATTGATAGATGGAAAGATTGTCTTGTCAATGAGAGCCATTTACCAGTCAAAGCTAGGGCCTTGGCCTTCTGGATACAGGTATATATTGATTATTGAATGGTGGGCTAAGGAGCTCTTGCAGAACATCTCTGAAAAGCAAGGGAGGAAAATGAACTCTCTGGAATCTGCTAAAGATATACCAAAATTCGTCGAATTTTTTAAGGATCAACTCAATTTGGCTGAAACGAAGTACCCTTTGGAACATTTTAAGACATTCAATCAATTTTTTGTGAGAGAGTTAAAGCCTGGTGCAAGACCAGTTGCCTGCCCAGAACGTGATGATGTTGCGGTCTGTGGTGCAGATAGCCGTCTTACAGCATTCAGTTCTGTTGATGACAGTCTAAGATTTTGGATTAAGGGTCGGAAGTTTTCAGTTCAAGGACTTCTGGGGCAAGATATTTGTTCCAGTGCTTTTATTGATGGAACATTGGTTATCTTTCGTTTGGCACCACAGGATTATCATCGTTTTCATAGTCCTGTTTCTGGAACTGTTGAGCAGTTTGTAAATATACCTGGATGCCTATATACGGTTAACCCTATTGCTGTTAATAGCAAGTATTGTAATGTCTTCACTGAGAACAAGCGAGTAGTATCAATTATATCAACGACAGAGTTTGGAAAGGTGGCTTTTGTTGCAATCGGCGCAACTATGGTTGGCAGCATCACCTTTTTAAAGAAGGAGGGAGACCATGTTGAGAAAGGAGATGAGTTTGGATATTTCTCGTTTGGTGGAAGCACTGTGATTTGTGTTTTCGAAAAGGATGCGATTGAGATAGATGAGGATCTCTTAGCAAATAGTTCCCGATCACTAGAGACTTTGGTTTCTGTTGGGATGAAGTTGGGTGTGTCAAAAAAACAAGCCAACATTGGGTTGCCAGACTTACATAACTGTGTGTTGCAAGATTGA

Protein Analysis

665

Amino Acids

74.15

Weight (kDa)

5.75

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 193 - 252 3e-07 EF-hand domain pair
PS_Dcarbxylase PF02666 436 - 631 7.8e-60 Phosphatidylserine decarboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 114
AccB1I GGYRCC 1 cut(s) 1537
AccB7I CCANNNNNTGG 1 cut(s) 1015
AciI CCGC 2 cut(s) 168, 1379
AclWI GGATC 7 cut(s) 75, 88, 368, 488, 1003, 1263, 1881
AcsI RAATTY 5 cut(s) 310, 431, 635, 1235, 1244
AcuI CTGAAG 3 cut(s) 24, 30, 119
AcyI GRCGYC 1 cut(s) 121
AfaI GTAC 2 cut(s) 274, 1283
AfiI CCNNNNNNNGG 5 cut(s) 806, 1015, 1574, 1618, 1959
AjnI CCWGG 3 cut(s) 440, 1336, 1603
AjuI GAANNNNNNNTTGG 2 cut(s) 1271, 1303
AluBI AGCT 8 cut(s) 15, 44, 212, 325, 707, 946, 1105, 1165
AluI AGCT 8 cut(s) 15, 44, 212, 325, 707, 946, 1105, 1165
Alw21I GWGCWC 1 cut(s) 1167
Alw26I GTCTC 8 cut(s) 96, 153, 368, 470, 806, 1033, 1770, 1898
AlwI GGATC 7 cut(s) 75, 88, 368, 488, 1003, 1263, 1881
AlwNI CAGNNNCTG 1 cut(s) 109
AoxI GGCC 4 cut(s) 344, 957, 1109, 1115
ApaI GGGCCC 1 cut(s) 961
ApeKI GCWGC 4 cut(s) 103, 674, 704, 1749
ApoI RAATTY 5 cut(s) 310, 431, 635, 1235, 1244
AspLEI GCGC 1 cut(s) 1736
AspS9I GGNCC 5 cut(s) 344, 550, 957, 958, 1109
AsuHPI GGTGA 3 cut(s) 116, 495, 1747
AsuII TTCGAA 1 cut(s) 1845
AvaII GGWCC 1 cut(s) 550
BaeGI GKGCMC 1 cut(s) 961
BamHI GGATCC 1 cut(s) 80
BanI GGYRCC 1 cut(s) 1537
BanII GRGCYC 2 cut(s) 961, 1167
BbsI GAAGAC 2 cut(s) 30, 1651
Bbv12I GWGCWC 1 cut(s) 1167
BbvI GCAGC 4 cut(s) 115, 686, 716, 1761
BccI CCATC 5 cut(s) 505, 608, 716, 1055, 1505
BceAI ACGGC 1 cut(s) 1383
BcgI CGANNNNNNTGC 4 cut(s) 251, 285, 1835, 1869
BciT130I CCWGG 3 cut(s) 442, 1338, 1605
BciVI GTATCC 1 cut(s) 1118
BclI TGATCA 1 cut(s) 286
BcoDI GTCTC 8 cut(s) 96, 153, 368, 470, 806, 1033, 1770, 1898
BfaI CTAG 2 cut(s) 1106, 1901
BfuI GTATCC 1 cut(s) 1118
BglII AGATCT 1 cut(s) 279
BisI GCNGC 5 cut(s) 104, 168, 675, 705, 1750
BlsI GCNGC 5 cut(s) 105, 169, 676, 706, 1751
Bme1390I CCNGG 3 cut(s) 442, 1338, 1605
Bme18I GGWCC 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 344, 550, 957, 958, 1109
BmiI GGNNCC 5 cut(s) 82, 552, 780, 959, 1539
BmrFI CCNGG 3 cut(s) 442, 1338, 1605
BmsI GCATC 3 cut(s) 1598, 1761, 1843
BpiI GAAGAC 2 cut(s) 30, 1651
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpmI CTGGAG 1 cut(s) 918
Bpu10I CCTNAGC 1 cut(s) 1158
Bpu14I TTCGAA 1 cut(s) 1845
BsaBI GATNNNNATC 2 cut(s) 1551, 1872
BsaHI GRCGYC 1 cut(s) 121
BsaI GGTCTC 2 cut(s) 96, 1770
BsaJI CCNNGG 3 cut(s) 171, 441, 1112
BsaWI WCCGGW 1 cut(s) 126
BsaXI ACNNNNNCTCC 2 cut(s) 1767, 1797
Bsc4I CCNNNNNNNGG 5 cut(s) 806, 1015, 1574, 1618, 1959
Bse1I ACTGG 7 cut(s) 34, 462, 883, 901, 1096, 1349, 1497
Bse8I GATNNNNATC 2 cut(s) 1551, 1872
BseBI CCWGG 3 cut(s) 442, 1338, 1605
BseDI CCNNGG 3 cut(s) 171, 441, 1112
BseGI GGATG 7 cut(s) 727, 745, 942, 968, 1613, 1858, 1929
BseJI GATNNNNATC 2 cut(s) 1551, 1872
BseLI CCNNNNNNNGG 5 cut(s) 806, 1015, 1574, 1618, 1959
BseMII CTCAG 2 cut(s) 378, 1656
BseNI ACTGG 7 cut(s) 34, 462, 883, 901, 1096, 1349, 1497
BseRI GAGGAG 5 cut(s) 84, 87, 90, 185, 704
BseSI GKGCMC 1 cut(s) 961
BseXI GCAGC 4 cut(s) 115, 686, 716, 1761
BsgI GTGCAG 2 cut(s) 95, 1410
BshFI GGCC 4 cut(s) 346, 959, 1111, 1117
BshNI GGYRCC 1 cut(s) 1537
BsiHKAI GWGCWC 1 cut(s) 1167
BsiSI CCGG 1 cut(s) 127
BslI CCNNNNNNNGG 5 cut(s) 806, 1015, 1574, 1618, 1959
BsmAI GTCTC 8 cut(s) 96, 153, 368, 470, 806, 1033, 1770, 1898
BsmBI CGTCTC 2 cut(s) 153, 368
BsmI GAATGC 1 cut(s) 1409
BsnI GGCC 4 cut(s) 346, 959, 1111, 1117
Bso31I GGTCTC 2 cut(s) 96, 1770
Bsp119I TTCGAA 1 cut(s) 1845
Bsp120I GGGCCC 1 cut(s) 957
Bsp1286I GDGCHC 2 cut(s) 961, 1167
BspACI CCGC 2 cut(s) 168, 1379
BspANI GGCC 4 cut(s) 346, 959, 1111, 1117
BspCNI CTCAG 2 cut(s) 377, 1657
BspLI GGNNCC 5 cut(s) 82, 552, 780, 959, 1539
BspPI GGATC 7 cut(s) 75, 88, 368, 488, 1003, 1263, 1881
BspT104I TTCGAA 1 cut(s) 1845
BspT107I GGYRCC 1 cut(s) 1537
BspTNI GGTCTC 2 cut(s) 96, 1770
BsrI ACTGG 7 cut(s) 34, 462, 883, 901, 1096, 1349, 1497
BssECI CCNNGG 3 cut(s) 171, 441, 1112
BssNI GRCGYC 1 cut(s) 121
BssT1I CCWWGG 1 cut(s) 1112
Bst2UI CCWGG 3 cut(s) 442, 1338, 1605
Bst4CI ACNGT 6 cut(s) 116, 1430, 1582, 1621, 1831, 1982
BstACI GRCGYC 1 cut(s) 121
BstAPI GCANNNNNTGC 1 cut(s) 109
BstBI TTCGAA 1 cut(s) 1845
BstC8I GCNNGC 2 cut(s) 240, 1357
BstDEI CTNAG 6 cut(s) 364, 947, 1158, 1433, 1665, 1879
BstF5I GGATG 7 cut(s) 727, 745, 942, 968, 1613, 1858, 1929
BstHHI GCGC 1 cut(s) 1736
BstMAI GTCTC 8 cut(s) 96, 153, 368, 470, 806, 1033, 1770, 1898
BstMWI GCNNNNNNNGC 4 cut(s) 109, 118, 1724, 1733
BstNI CCWGG 3 cut(s) 442, 1338, 1605
BstSCI CCNGG 3 cut(s) 440, 1336, 1603
BstSLI GKGCMC 1 cut(s) 961
BstV1I GCAGC 4 cut(s) 115, 686, 716, 1761
BstV2I GAAGAC 2 cut(s) 30, 1651
BstX2I RGATCY 5 cut(s) 80, 279, 360, 493, 1873
BstYI RGATCY 5 cut(s) 80, 279, 360, 493, 1873
BsuI GTATCC 1 cut(s) 1118
BsuRI GGCC 4 cut(s) 346, 959, 1111, 1117
BtsCI GGATG 7 cut(s) 727, 745, 942, 968, 1613, 1858, 1929
BtsIMutI CAGTG 5 cut(s) 27, 372, 1504, 1662, 1827
Cac8I GCNNGC 2 cut(s) 240, 1357
CaiI CAGNNNCTG 1 cut(s) 109
CfoI GCGC 1 cut(s) 1736
Cfr13I GGNCC 5 cut(s) 344, 550, 957, 958, 1109
CseI GACGC 2 cut(s) 110, 591
Csp6I GTAC 2 cut(s) 273, 1282
CviAII CATG 3 cut(s) 736, 844, 1781
CviQI GTAC 2 cut(s) 273, 1282
DdeI CTNAG 6 cut(s) 364, 947, 1158, 1433, 1665, 1879
DraI TTTAAA 3 cut(s) 700, 987, 1764
DrdI GACNNNNNNGTC 1 cut(s) 114
DseDI GACNNNNNNGTC 1 cut(s) 114
Ecl136II GAGCTC 1 cut(s) 1165
Eco130I CCWWGG 1 cut(s) 1112
Eco24I GRGCYC 2 cut(s) 961, 1167
Eco31I GGTCTC 2 cut(s) 96, 1770
Eco47I GGWCC 1 cut(s) 550
Eco53kI GAGCTC 1 cut(s) 1165
Eco57I CTGAAG 3 cut(s) 24, 30, 119
EcoICRI GAGCTC 1 cut(s) 1165
EcoO109I RGGNCCY 2 cut(s) 550, 1109
EcoRI GAATTC 1 cut(s) 310
EcoRII CCWGG 3 cut(s) 440, 1336, 1603
EcoT14I CCWWGG 1 cut(s) 1112
EcoT38I GRGCYC 2 cut(s) 961, 1167
ErhI CCWWGG 1 cut(s) 1112
Esp3I CGTCTC 2 cut(s) 153, 368
FaeI CATG 3 cut(s) 739, 847, 1784
FalI AAGNNNNNCTT 4 cut(s) 1058, 1090, 1151, 1183
FatI CATG 3 cut(s) 735, 843, 1780
FbaI TGATCA 1 cut(s) 286
Fnu4HI GCNGC 5 cut(s) 104, 168, 675, 705, 1750
FokI GGATG 7 cut(s) 734, 752, 949, 955, 1620, 1865, 1936
FriOI GRGCYC 2 cut(s) 961, 1167
Fsp4HI GCNGC 5 cut(s) 104, 168, 675, 705, 1750
FspBI CTAG 2 cut(s) 1106, 1901
GlaI GCGC 1 cut(s) 1735
GluI GCNGC 5 cut(s) 104, 168, 675, 705, 1750
GsuI CTGGAG 1 cut(s) 918
HaeIII GGCC 4 cut(s) 346, 959, 1111, 1117
HapII CCGG 1 cut(s) 127
HgaI GACGC 2 cut(s) 110, 591
HhaI GCGC 1 cut(s) 1736
Hin1I GRCGYC 1 cut(s) 121
Hin1II CATG 3 cut(s) 739, 847, 1784
Hin6I GCGC 1 cut(s) 1734
HinP1I GCGC 1 cut(s) 1734
HincII GTYRAC 1 cut(s) 1624
HindII GTYRAC 1 cut(s) 1624
HindIII AAGCTT 2 cut(s) 323, 944
HpaI GTTAAC 1 cut(s) 1624
HpaII CCGG 1 cut(s) 127
HphI GGTGA 3 cut(s) 116, 495, 1747
Hpy166II GTNNAC 3 cut(s) 275, 601, 1624
Hpy188III TCNNGA 7 cut(s) 332, 818, 993, 1122, 1211, 1575, 1893
Hpy8I GTNNAC 3 cut(s) 275, 601, 1624
Hpy99I CGWCG 4 cut(s) 90, 120, 185, 1244
HpyAV CCTTC 4 cut(s) 764, 866, 1128, 1762
HpyCH4III ACNGT 6 cut(s) 116, 1430, 1582, 1621, 1831, 1982
HpyCH4IV ACGT 1 cut(s) 1366
HpyCH4V TGCA 9 cut(s) 112, 317, 356, 578, 1171, 1343, 1391, 1727, 1990
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 118, 1724, 1733
HpyF3I CTNAG 6 cut(s) 364, 947, 1158, 1433, 1665, 1879
HpySE526I ACGT 1 cut(s) 1366
Hsp92I GRCGYC 1 cut(s) 121
Hsp92II CATG 3 cut(s) 739, 847, 1784
HspAI GCGC 1 cut(s) 1734
Ksp22I TGATCA 1 cut(s) 286
KspAI GTTAAC 1 cut(s) 1624
LmnI GCTCC 3 cut(s) 20, 140, 1162
Lsp1109I GCAGC 4 cut(s) 115, 686, 716, 1761
LweI GCATC 3 cut(s) 1598, 1761, 1843
MaeI CTAG 2 cut(s) 1106, 1901
MaeII ACGT 1 cut(s) 1366
MaeIII GTNAC 1 cut(s) 122
MboII GAAGA 6 cut(s) 30, 35, 623, 833, 1061, 1651
MfeI CAATTG 2 cut(s) 555, 790
MflI RGATCY 5 cut(s) 80, 279, 360, 493, 1873
MhlI GDGCHC 2 cut(s) 961, 1167
MlyI GAGTC 3 cut(s) 59, 139, 808
MmeI TCCRAC 2 cut(s) 163, 1433
MslI CAYNNNNRTG 1 cut(s) 1980
MspA1I CMGCKG 1 cut(s) 707
MspI CCGG 1 cut(s) 127
MspR9I CCNGG 3 cut(s) 442, 1338, 1605
MssI GTTTAAAC 1 cut(s) 987
MunI CAATTG 2 cut(s) 555, 790
Mva1269I GAATGC 1 cut(s) 1409
MvaI CCWGG 3 cut(s) 442, 1338, 1605
MwoI GCNNNNNNNGC 4 cut(s) 109, 118, 1724, 1733
NlaIII CATG 3 cut(s) 739, 847, 1784
NlaIV GGNNCC 5 cut(s) 82, 552, 780, 959, 1539
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 1 cut(s) 122
NspV TTCGAA 1 cut(s) 1845
PctI GAATGC 1 cut(s) 1409
PfeI GAWTC 7 cut(s) 186, 452, 458, 664, 824, 847, 1214
PflFI GACNNNGTC 1 cut(s) 512
PflMI CCANNNNNTGG 1 cut(s) 1015
PkrI GCNGC 5 cut(s) 105, 169, 676, 706, 1751
PleI GAGTC 3 cut(s) 58, 138, 808
PmeI GTTTAAAC 1 cut(s) 987
PpsI GAGTC 3 cut(s) 58, 138, 808
PpuMI RGGWCCY 1 cut(s) 550
Psp124BI GAGCTC 1 cut(s) 1167
Psp5II RGGWCCY 1 cut(s) 550
Psp6I CCWGG 3 cut(s) 440, 1336, 1603
PspGI CCWGG 3 cut(s) 440, 1336, 1603
PspN4I GGNNCC 5 cut(s) 82, 552, 780, 959, 1539
PspOMI GGGCCC 1 cut(s) 957
PspPI GGNCC 5 cut(s) 344, 550, 957, 958, 1109
PspPPI RGGWCCY 1 cut(s) 550
PstNI CAGNNNCTG 1 cut(s) 109
PsuI RGATCY 5 cut(s) 80, 279, 360, 493, 1873
PsyI GACNNNGTC 1 cut(s) 512
PvuII CAGCTG 1 cut(s) 707
RsaI GTAC 2 cut(s) 274, 1283
RsaNI GTAC 2 cut(s) 273, 1282
RseI CAYNNNNRTG 1 cut(s) 1980
SacI GAGCTC 1 cut(s) 1167
SatI GCNGC 5 cut(s) 104, 168, 675, 705, 1750
Sau96I GGNCC 5 cut(s) 344, 550, 957, 958, 1109
SchI GAGTC 3 cut(s) 59, 139, 808
ScrFI CCNGG 3 cut(s) 442, 1338, 1605
SduI GDGCHC 2 cut(s) 961, 1167
SfaNI GCATC 3 cut(s) 1598, 1761, 1843
SfuI TTCGAA 1 cut(s) 1845
SinI GGWCC 1 cut(s) 550
SmiMI CAYNNNNRTG 1 cut(s) 1980
SsiI CCGC 2 cut(s) 168, 1379
SspMI CTAG 2 cut(s) 1106, 1901
SstI GAGCTC 1 cut(s) 1167
StyD4I CCNGG 3 cut(s) 440, 1336, 1603
StyI CCWWGG 1 cut(s) 1112
TaaI ACNGT 6 cut(s) 116, 1430, 1582, 1621, 1831, 1982
TaiI ACGT 1 cut(s) 1369
TaqI TCGA 3 cut(s) 208, 1242, 1845
TaqII GACCGA 1 cut(s) 78
TauI GCSGC 1 cut(s) 170
TfiI GAWTC 7 cut(s) 186, 452, 458, 664, 824, 847, 1214
TscAI CASTG 5 cut(s) 34, 372, 1504, 1669, 1834
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 4 cut(s) 103, 674, 704, 1749
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 9 cut(s) 233, 615, 624, 839, 885, 957, 1217, 1550, 1940
TspRI CASTG 5 cut(s) 34, 372, 1504, 1669, 1834
Tth111I GACNNNGTC 1 cut(s) 512
Van91I CCANNNNNTGG 1 cut(s) 1015
VpaK11BI GGWCC 1 cut(s) 550
XapI RAATTY 5 cut(s) 310, 431, 635, 1235, 1244
XspI CTAG 2 cut(s) 1106, 1901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.