Rorug07G0275300

Sucrose transport protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
26290430 .. 26291661
1232 bp
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UTR
Exon/CDS
Intron
Rorug07G0275300.1

Sequence Viewer

Length: 345 bp
ATGGAATCCATGACAGTGATTGCTGAAGCAACTTCGACTTGTGAATCACATCCTCCAAATAAGAAAAATAAAAAGGATCCACTAGCACAAGCAATTGGTGATGTGACCAACACCTTGAAAGAGTTTATGGCAGCTCAAGTCTCCCCACAACTCAAAGGAGAGGATGTACATGAAGTGGTTTCTAAAGTAGCAAACCTCAGCAAATTGCAAGTCTTCAAAGATGTACTCATATTGATGAGTGGTAACCCCGAAGAATTTTCTCTACTGAAGTCTCTTAATGATACTGAAAAGAGTGAGTGGATAAGAATGCTCATATGGAAATATGAAGGGCAACTAAGAAATTGA

Protein Analysis

114

Amino Acids

12.82

Weight (kDa)

5.69

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 71, 84
AcsI RAATTY 1 cut(s) 254
AcuI CTGAAG 2 cut(s) 45, 287
AfaI GTAC 2 cut(s) 168, 225
AgsI TTSAA 2 cut(s) 118, 217
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
Alw26I GTCTC 2 cut(s) 145, 276
AlwI GGATC 2 cut(s) 71, 84
ApeKI GCWGC 1 cut(s) 131
ApoI RAATTY 1 cut(s) 254
ArsI GACNNNNNNTTYG 2 cut(s) 195, 227
AsuHPI GGTGA 1 cut(s) 110
BamHI GGATCC 1 cut(s) 76
BbsI GAAGAC 1 cut(s) 205
BbvCI CCTCAGC 1 cut(s) 197
BbvI GCAGC 1 cut(s) 143
BcoDI GTCTC 2 cut(s) 145, 276
BfaI CTAG 1 cut(s) 83
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
BmiI GGNNCC 1 cut(s) 78
BpiI GAAGAC 1 cut(s) 205
Bpu10I CCTNAGC 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 120
BsaXI ACNNNNNCTCC 2 cut(s) 150, 180
BseGI GGATG 2 cut(s) 49, 169
BseMII CTCAG 1 cut(s) 211
BseXI GCAGC 1 cut(s) 143
BsmAI GTCTC 2 cut(s) 145, 276
BsmI GAATGC 1 cut(s) 312
Bsp1407I TGTACA 1 cut(s) 166
Bsp143I GATC 1 cut(s) 76
BspCNI CTCAG 1 cut(s) 210
BspLI GGNNCC 1 cut(s) 78
BspPI GGATC 2 cut(s) 71, 84
BsrGI TGTACA 1 cut(s) 166
BssMI GATC 1 cut(s) 76
Bst4CI ACNGT 1 cut(s) 16
BstAUI TGTACA 1 cut(s) 166
BstDEI CTNAG 2 cut(s) 197, 335
BstEII GGTNACC 1 cut(s) 242
BstF5I GGATG 2 cut(s) 49, 169
BstKTI GATC 1 cut(s) 79
BstMAI GTCTC 2 cut(s) 145, 276
BstMBI GATC 1 cut(s) 76
BstPI GGTNACC 1 cut(s) 242
BstV1I GCAGC 1 cut(s) 143
BstV2I GAAGAC 1 cut(s) 205
BstX2I RGATCY 1 cut(s) 76
BstYI RGATCY 1 cut(s) 76
BtsCI GGATG 2 cut(s) 49, 169
BtsIMutI CAGTG 1 cut(s) 21
Csp6I GTAC 2 cut(s) 167, 224
CviAII CATG 2 cut(s) 10, 170
CviJI RGCY 1 cut(s) 134
CviKI_1 RGCY 1 cut(s) 134
CviQI GTAC 2 cut(s) 167, 224
DdeI CTNAG 2 cut(s) 197, 335
DpnI GATC 1 cut(s) 78
DpnII GATC 1 cut(s) 76
Eco57I CTGAAG 2 cut(s) 45, 287
Eco91I GGTNACC 1 cut(s) 242
EcoO65I GGTNACC 1 cut(s) 242
FaeI CATG 2 cut(s) 13, 173
FaiI YATR 7 cut(s) 11, 128, 171, 230, 314, 316, 324
FatI CATG 2 cut(s) 9, 169
FauNDI CATATG 1 cut(s) 314
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 2 cut(s) 36, 176
Fsp4HI GCNGC 1 cut(s) 132
FspBI CTAG 1 cut(s) 83
GluI GCNGC 1 cut(s) 132
Hin1II CATG 2 cut(s) 13, 173
HinfI GANTC 2 cut(s) 5, 44
HphI GGTGA 1 cut(s) 110
HpyAV CCTTC 1 cut(s) 320
HpyCH4III ACNGT 1 cut(s) 16
HpyCH4V TGCA 1 cut(s) 208
HpyF3I CTNAG 2 cut(s) 197, 335
Hsp92II CATG 2 cut(s) 13, 173
Kzo9I GATC 1 cut(s) 76
Lsp1109I GCAGC 1 cut(s) 143
MaeI CTAG 1 cut(s) 83
MaeIII GTNAC 2 cut(s) 103, 242
MalI GATC 1 cut(s) 78
MboI GATC 1 cut(s) 76
MboII GAAGA 2 cut(s) 205, 263
MfeI CAATTG 1 cut(s) 93
MflI RGATCY 1 cut(s) 76
MluCI AATT 4 cut(s) 93, 203, 254, 340
MnlI CCTC 3 cut(s) 63, 154, 206
MseI TTAA 1 cut(s) 276
MslI CAYNNNNRTG 2 cut(s) 14, 233
MunI CAATTG 1 cut(s) 93
Mva1269I GAATGC 1 cut(s) 312
NdeI CATATG 1 cut(s) 314
NdeII GATC 1 cut(s) 76
NlaIII CATG 2 cut(s) 13, 173
NlaIV GGNNCC 1 cut(s) 78
NmuCI GTSAC 1 cut(s) 103
PctI GAATGC 1 cut(s) 312
PfeI GAWTC 2 cut(s) 5, 44
PkrI GCNGC 1 cut(s) 133
PspEI GGTNACC 1 cut(s) 242
PspN4I GGNNCC 1 cut(s) 78
PsuI RGATCY 1 cut(s) 76
RsaI GTAC 2 cut(s) 168, 225
RsaNI GTAC 2 cut(s) 167, 224
RseI CAYNNNNRTG 2 cut(s) 14, 233
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 1 cut(s) 76
SetI ASST 3 cut(s) 116, 136, 198
SgeI CNNG 9 cut(s) 22, 51, 95, 101, 127, 149, 182, 221, 260
SmiMI CAYNNNNRTG 2 cut(s) 14, 233
SmlI CTYRAG 1 cut(s) 135
SmoI CTYRAG 1 cut(s) 135
Sse9I AATT 4 cut(s) 93, 203, 254, 340
SspMI CTAG 1 cut(s) 83
TaaI ACNGT 1 cut(s) 16
TaqI TCGA 1 cut(s) 35
TasI AATT 4 cut(s) 93, 203, 254, 340
TatI WGTACW 2 cut(s) 166, 223
TfiI GAWTC 2 cut(s) 5, 44
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TscAI CASTG 1 cut(s) 21
TseFI GTSAC 1 cut(s) 103
TseI GCWGC 1 cut(s) 131
Tsp45I GTSAC 1 cut(s) 103
TspDTI ATGAA 2 cut(s) 186, 339
TspRI CASTG 1 cut(s) 21
XapI RAATTY 1 cut(s) 254
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.