Rorug07G0275700

Sucrose transport protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
26363131 .. 26363585
455 bp
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UTR
Exon/CDS
Intron
Rorug07G0275700.1

Sequence Viewer

Length: 276 bp
ATGAGTCACCTATATGAGGATGAAGAGGATTACGAAGAAAATGGGTATGACGAAAGTGAGACACAAGATGTTGGTGGCGATTTTAATATTCAACAAGACGACGACAGCGAAACACAAGATGTTGGTGGCATGTTTCATCAGCGAGACACAAGAAGTTGCGGGGAAGAAAGCGAGAATAGAACAAAGAGACGAAAGTTGGACTTTCTGTCTTGGGCTTTAAAGGAAAAGTTGGCCCAAATCATAGTTTCACCATTTTTTTATTCATTTAAGTCATAA

Protein Analysis

91

Amino Acids

10.7

Weight (kDa)

4.31

Isoelectric Point (pI)

70.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 159
AfiI CCNNNNNNNGG 1 cut(s) 16
AgsI TTSAA 1 cut(s) 92
AhdI GACNNNNNGTC 1 cut(s) 205
Alw26I GTCTC 3 cut(s) 53, 138, 181
AoxI GGCC 1 cut(s) 231
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 240
BcoDI GTCTC 3 cut(s) 53, 138, 181
BmeRI GACNNNNNGTC 1 cut(s) 205
BmgT120I GGNCC 1 cut(s) 232
Bsc4I CCNNNNNNNGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 16
BshFI GGCC 1 cut(s) 233
BslI CCNNNNNNNGG 1 cut(s) 16
BsmAI GTCTC 3 cut(s) 53, 138, 181
BsmBI CGTCTC 1 cut(s) 181
BsnI GGCC 1 cut(s) 233
BspACI CCGC 1 cut(s) 159
BspANI GGCC 1 cut(s) 233
Bst6I CTCTTC 1 cut(s) 18
BstENI CCTNNNNNAGG 1 cut(s) 14
BstF5I GGATG 1 cut(s) 25
BstMAI GTCTC 3 cut(s) 53, 138, 181
BstNSI RCATGY 1 cut(s) 133
BsuRI GGCC 1 cut(s) 233
BtsCI GGATG 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 232
CviAII CATG 1 cut(s) 130
CviJI RGCY 2 cut(s) 215, 233
CviKI_1 RGCY 2 cut(s) 215, 233
DraI TTTAAA 1 cut(s) 219
DriI GACNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 18
Eam1105I GACNNNNNGTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 18
EcoNI CCTNNNNNAGG 1 cut(s) 14
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 1 cut(s) 133
FaiI YATR 6 cut(s) 13, 15, 48, 131, 242, 274
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FatI CATG 1 cut(s) 129
FauI CCCGC 1 cut(s) 152
FokI GGATG 1 cut(s) 32
HaeIII GGCC 1 cut(s) 233
Hin1II CATG 1 cut(s) 133
HinfI GANTC 1 cut(s) 4
HphI GGTGA 1 cut(s) 240
Hpy99I CGWCG 1 cut(s) 104
Hsp92II CATG 1 cut(s) 133
MaeIII GTNAC 1 cut(s) 5
MboII GAAGA 3 cut(s) 35, 47, 176
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 177
MnlI CCTC 2 cut(s) 10, 19
MseI TTAA 3 cut(s) 84, 218, 267
MslI CAYNNNNRTG 1 cut(s) 12
NlaIII CATG 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 5
NspI RCATGY 1 cut(s) 133
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PspPI GGNCC 1 cut(s) 232
RseI CAYNNNNRTG 1 cut(s) 12
SaqAI TTAA 3 cut(s) 84, 218, 267
Sau96I GGNCC 1 cut(s) 232
SchI GAGTC 1 cut(s) 13
SetI ASST 1 cut(s) 12
SgeI CNNG 9 cut(s) 77, 107, 128, 142, 155, 162, 172, 184, 222
SmiMI CAYNNNNRTG 1 cut(s) 12
SsiI CCGC 1 cut(s) 159
SspI AATATT 1 cut(s) 88
Tru1I TTAA 3 cut(s) 84, 218, 267
Tru9I TTAA 3 cut(s) 84, 218, 267
TseFI GTSAC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 5
TspDTI ATGAA 3 cut(s) 36, 125, 252
XagI CCTNNNNNAGG 1 cut(s) 14
XceI RCATGY 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.