Rh1AG256500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
47361653 .. 47368534
6882 bp
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UTR
Exon/CDS
Intron
Rh1AG256500.1

Sequence Viewer

Length: 204 bp
ATGGGCTCACTTGAACATCTATCCCCCTCTTCCAACCACTTTAGTGCAGCAGTATTCCTTTTGGCTTCAAGCATAATTCCTTTAGTGCTGATTGTGGTGTATTCTCCAATCCGAGTGCAGAAAGGGCAGCAGCCTGAAGATGAGATGCAATGTGCCATATTAGAGAAAAGCAGTTGCAAAAATGATAGCAAAGCATTAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.29

Weight (kDa)

6.7

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020487)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 156
AgsI TTSAA 2 cut(s) 14, 69
AleI CACNNNNGTG 1 cut(s) 42
ApeKI GCWGC 3 cut(s) 47, 127, 130
BanII GRGCYC 1 cut(s) 8
BbvI GCAGC 3 cut(s) 59, 139, 142
BisI GCNGC 3 cut(s) 48, 128, 131
BlsI GCNGC 3 cut(s) 49, 129, 132
BmsI GCATC 1 cut(s) 135
Bse3DI GCAATG 1 cut(s) 155
BseMI GCAATG 1 cut(s) 155
BseXI GCAGC 3 cut(s) 59, 139, 142
BsgI GTGCAG 2 cut(s) 66, 137
Bsp1286I GDGCHC 1 cut(s) 8
BsrDI GCAATG 1 cut(s) 155
Bst6I CTCTTC 1 cut(s) 34
BstMWI GCNNNNNNNGC 1 cut(s) 124
BstV1I GCAGC 3 cut(s) 59, 139, 142
CviJI RGCY 3 cut(s) 6, 65, 133
CviKI_1 RGCY 3 cut(s) 6, 65, 133
Eam1104I CTCTTC 1 cut(s) 34
EarI CTCTTC 1 cut(s) 34
Eco24I GRGCYC 1 cut(s) 8
Eco57I CTGAAG 1 cut(s) 156
EcoT38I GRGCYC 1 cut(s) 8
FaiI YATR 2 cut(s) 74, 158
Fnu4HI GCNGC 3 cut(s) 48, 128, 131
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 3 cut(s) 48, 128, 131
GluI GCNGC 3 cut(s) 48, 128, 131
Hpy188I TCNGA 1 cut(s) 113
HpyCH4V TGCA 4 cut(s) 47, 118, 148, 177
HpyF10VI GCNNNNNNNGC 1 cut(s) 124
LpnPI CCDG 1 cut(s) 147
Lsp1109I GCAGC 3 cut(s) 59, 139, 142
LweI GCATC 1 cut(s) 135
MboII GAAGA 2 cut(s) 21, 149
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 1 cut(s) 75
MmeI TCCRAC 1 cut(s) 57
MnlI CCTC 1 cut(s) 37
MseI TTAA 1 cut(s) 197
MslI CAYNNNNRTG 2 cut(s) 42, 199
MwoI GCNNNNNNNGC 1 cut(s) 124
OliI CACNNNNGTG 1 cut(s) 42
PkrI GCNGC 3 cut(s) 49, 129, 132
RseI CAYNNNNRTG 2 cut(s) 42, 199
SaqAI TTAA 1 cut(s) 197
SatI GCNGC 3 cut(s) 48, 128, 131
SduI GDGCHC 1 cut(s) 8
SfaNI GCATC 1 cut(s) 135
SgeI CNNG 4 cut(s) 23, 81, 125, 146
SmiMI CAYNNNNRTG 2 cut(s) 42, 199
Sse9I AATT 1 cut(s) 75
TasI AATT 1 cut(s) 75
Tru1I TTAA 1 cut(s) 197
Tru9I TTAA 1 cut(s) 197
TseI GCWGC 3 cut(s) 47, 127, 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.