No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g27580 |
| malus_domestica | MD07G1254200.v1.1 |
| prunus_persica | Prupe.2G277500_v2.0.a1 |
| pyrus_communis | pycom01g19360 |
| rosa_laevigata | RLG00000026737 |
| rosa_roxburghii | Rroxscaffold_4G00283480 |
| rosa_rugosa | Rorug01G0383000 Rorug01G0383100.1 |
| rosa_samantha | Rh1AG394000 Rh1BG358600 Rh1CG371600 Rh1DG389200 |
| rosa_wichuraiana | Rw1G034210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 489 |
| AccII | CGCG | 1 cut(s) | 108 |
| AciI | CCGC | 1 cut(s) | 88 |
| AcoI | YGGCCR | 1 cut(s) | 85 |
| AcsI | RAATTY | 1 cut(s) | 58 |
| AfaI | GTAC | 3 cut(s) | 181, 195, 271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 124 |
| AhlI | ACTAGT | 1 cut(s) | 196 |
| AluBI | AGCT | 1 cut(s) | 221 |
| AluI | AGCT | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 85 |
| ApeKI | GCWGC | 1 cut(s) | 90 |
| ApoI | RAATTY | 1 cut(s) | 58 |
| AspLEI | GCGC | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 2 cut(s) | 19, 236 |
| BbsI | GAAGAC | 2 cut(s) | 6, 330 |
| BbvI | GCAGC | 1 cut(s) | 102 |
| BccI | CCATC | 2 cut(s) | 14, 461 |
| BcuI | ACTAGT | 1 cut(s) | 196 |
| BfaI | CTAG | 4 cut(s) | 143, 197, 218, 342 |
| BisI | GCNGC | 2 cut(s) | 88, 91 |
| BlsI | GCNGC | 2 cut(s) | 89, 92 |
| BmcAI | AGTACT | 1 cut(s) | 271 |
| BoxI | GACNNNNGTC | 1 cut(s) | 132 |
| BpiI | GAAGAC | 2 cut(s) | 6, 330 |
| BsaBI | GATNNNNATC | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 213 |
| BseGI | GGATG | 1 cut(s) | 214 |
| BseJI | GATNNNNATC | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 124 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseXI | GCAGC | 1 cut(s) | 102 |
| Bsh1236I | CGCG | 1 cut(s) | 108 |
| BshFI | GGCC | 1 cut(s) | 87 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 124 |
| BsnI | GGCC | 1 cut(s) | 87 |
| Bsp143I | GATC | 1 cut(s) | 214 |
| BspACI | CCGC | 1 cut(s) | 88 |
| BspANI | GGCC | 1 cut(s) | 87 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BspFNI | CGCG | 1 cut(s) | 108 |
| BssMI | GATC | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 1 cut(s) | 114 |
| BstC8I | GCNNGC | 2 cut(s) | 54, 70 |
| BstDEI | CTNAG | 2 cut(s) | 63, 399 |
| BstF5I | GGATG | 1 cut(s) | 214 |
| BstFNI | CGCG | 1 cut(s) | 108 |
| BstHHI | GCGC | 1 cut(s) | 110 |
| BstKTI | GATC | 1 cut(s) | 217 |
| BstMBI | GATC | 1 cut(s) | 214 |
| BstNSI | RCATGY | 1 cut(s) | 56 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 132 |
| BstUI | CGCG | 1 cut(s) | 108 |
| BstV1I | GCAGC | 1 cut(s) | 102 |
| BstV2I | GAAGAC | 2 cut(s) | 6, 330 |
| BsuRI | GGCC | 1 cut(s) | 87 |
| BtsCI | GGATG | 1 cut(s) | 214 |
| BtsIMutI | CAGTG | 1 cut(s) | 110 |
| Cac8I | GCNNGC | 2 cut(s) | 54, 70 |
| CfoI | GCGC | 1 cut(s) | 110 |
| Csp6I | GTAC | 3 cut(s) | 180, 194, 270 |
| CviAII | CATG | 5 cut(s) | 10, 49, 53, 242, 361 |
| CviJI | RGCY | 7 cut(s) | 68, 87, 93, 163, 221, 421, 493 |
| CviKI_1 | RGCY | 7 cut(s) | 68, 87, 93, 163, 221, 421, 493 |
| CviQI | GTAC | 3 cut(s) | 180, 194, 270 |
| DdeI | CTNAG | 2 cut(s) | 63, 399 |
| DpnI | GATC | 1 cut(s) | 216 |
| DpnII | GATC | 1 cut(s) | 214 |
| EaeI | YGGCCR | 1 cut(s) | 85 |
| EcoT22I | ATGCAT | 1 cut(s) | 54 |
| FaeI | CATG | 5 cut(s) | 13, 52, 56, 245, 364 |
| FatI | CATG | 5 cut(s) | 9, 48, 52, 241, 360 |
| Fnu4HI | GCNGC | 2 cut(s) | 88, 91 |
| FokI | GGATG | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 2 cut(s) | 88, 91 |
| FspBI | CTAG | 4 cut(s) | 143, 197, 218, 342 |
| GlaI | GCGC | 1 cut(s) | 109 |
| GluI | GCNGC | 2 cut(s) | 88, 91 |
| HaeIII | GGCC | 1 cut(s) | 87 |
| HhaI | GCGC | 1 cut(s) | 110 |
| Hin1II | CATG | 5 cut(s) | 13, 52, 56, 245, 364 |
| Hin6I | GCGC | 1 cut(s) | 108 |
| HinP1I | GCGC | 1 cut(s) | 108 |
| HinfI | GANTC | 2 cut(s) | 335, 404 |
| HphI | GGTGA | 2 cut(s) | 19, 236 |
| Hpy188I | TCNGA | 3 cut(s) | 64, 127, 504 |
| Hpy188III | TCNNGA | 1 cut(s) | 408 |
| HpyAV | CCTTC | 3 cut(s) | 41, 226, 405 |
| HpyCH4III | ACNGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 56 |
| HpyF3I | CTNAG | 2 cut(s) | 63, 399 |
| Hsp92II | CATG | 5 cut(s) | 13, 52, 56, 245, 364 |
| HspAI | GCGC | 1 cut(s) | 108 |
| Kzo9I | GATC | 1 cut(s) | 214 |
| LpnPI | CCDG | 3 cut(s) | 191, 207, 303 |
| Lsp1109I | GCAGC | 1 cut(s) | 102 |
| MaeI | CTAG | 4 cut(s) | 143, 197, 218, 342 |
| MalI | GATC | 1 cut(s) | 216 |
| MboI | GATC | 1 cut(s) | 214 |
| MboII | GAAGA | 5 cut(s) | 6, 16, 36, 330, 467 |
| MluCI | AATT | 2 cut(s) | 58, 305 |
| MlyI | GAGTC | 1 cut(s) | 344 |
| MnlI | CCTC | 5 cut(s) | 58, 129, 153, 410, 519 |
| Mph1103I | ATGCAT | 1 cut(s) | 54 |
| MseI | TTAA | 1 cut(s) | 201 |
| MvnI | CGCG | 1 cut(s) | 108 |
| NdeII | GATC | 1 cut(s) | 214 |
| NlaIII | CATG | 5 cut(s) | 13, 52, 56, 245, 364 |
| NsiI | ATGCAT | 1 cut(s) | 54 |
| NspI | RCATGY | 1 cut(s) | 56 |
| PaeI | GCATGC | 1 cut(s) | 56 |
| PfeI | GAWTC | 1 cut(s) | 404 |
| PkrI | GCNGC | 2 cut(s) | 89, 92 |
| PleI | GAGTC | 1 cut(s) | 343 |
| PpsI | GAGTC | 1 cut(s) | 343 |
| PshAI | GACNNNNGTC | 1 cut(s) | 132 |
| PsiI | TTATAA | 1 cut(s) | 489 |
| RsaI | GTAC | 3 cut(s) | 181, 195, 271 |
| RsaNI | GTAC | 3 cut(s) | 180, 194, 270 |
| SaqAI | TTAA | 1 cut(s) | 201 |
| SatI | GCNGC | 2 cut(s) | 88, 91 |
| Sau3AI | GATC | 1 cut(s) | 214 |
| ScaI | AGTACT | 1 cut(s) | 271 |
| SchI | GAGTC | 1 cut(s) | 344 |
| SetI | ASST | 2 cut(s) | 223, 511 |
| SpeI | ACTAGT | 1 cut(s) | 196 |
| SphI | GCATGC | 1 cut(s) | 56 |
| Sse9I | AATT | 2 cut(s) | 58, 305 |
| SsiI | CCGC | 1 cut(s) | 88 |
| SspMI | CTAG | 4 cut(s) | 143, 197, 218, 342 |
| TaaI | ACNGT | 1 cut(s) | 114 |
| TasI | AATT | 2 cut(s) | 58, 305 |
| TatI | WGTACW | 1 cut(s) | 269 |
| TauI | GCSGC | 1 cut(s) | 90 |
| TfiI | GAWTC | 1 cut(s) | 404 |
| Tru1I | TTAA | 1 cut(s) | 201 |
| Tru9I | TTAA | 1 cut(s) | 201 |
| TscAI | CASTG | 1 cut(s) | 117 |
| TseI | GCWGC | 1 cut(s) | 90 |
| TspRI | CASTG | 1 cut(s) | 117 |
| XapI | RAATTY | 1 cut(s) | 58 |
| XceI | RCATGY | 1 cut(s) | 56 |
| XspI | CTAG | 4 cut(s) | 143, 197, 218, 342 |
| ZrmI | AGTACT | 1 cut(s) | 271 |
| Zsp2I | ATGCAT | 1 cut(s) | 54 |