Rh1BG275100

Adaptor-related protein complex 5, beta 1 subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
41121346 .. 41126403
5058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG275100.1

Sequence Viewer

Length: 3354 bp
ATGACCGATAAGCCACCGGAGCGGTCCCTATCGCCGCCGTGGAAGCCCGTCACGCTCCAAGACTGGGAGTTCTTGATCGACGATTTCCAGCAAGGCGGCGCACGCCGCCACCGGTGGACCTCCGCGTACCCAATCCTCATCGACCAAGCCCTCTCTTGTCTCAACAAGCGCGAATTCCCTCTCAAGCTCCAGCTCATCGTCTTCCTCGAAGAGTTCTCCGACCCGCTCTTCACATCCGACCCGGACTCCCTCCCCAAAACCCTCCACCGCCTCATCGAAACCCTCCGCGCCCTGATCCAGACCCCCGCCGATGGCGTCCACGTCACCCTCGCCCTCAAGGAGCAGACCATGCTCTCCGTCACCGCGATCGTCATCGCCGCCGACTACATGCTCGACGGCCTGGTCGAGCTGCTGCTCACGGTCGCTAACCGCCCCAACCACGGCGTCGACCGCCAGGTGCGTGCCGTCGCGTGCGAGTGCCTGCGCGAGTTGGAGAAGTCGTACCCGTGCCTGCTCTCCGATATCGGCGGACATCTTTGGAGTCTGTGCCAGAGCGAGAGGACGCACGCCGCGCAGAGCTACATTCTCTTGTTTACGACCGTCGTTCATAACATCGTCGCGAAAAAGCTCGGCGTTTCGATTCTGAATACGACGGTGCCTCTGGTGCCGTTCAGTGCTCCTCAGGTGTTGGTGAATGGCTCCGGGAAGGAGGGTTCGGGTGGGTTGAACTACAAGGAGCTGAGGAGGGCTATGTCGTTTTTGCTGGAGTGGCCGCAGGTGTTGACGCCGTGTGGGATGGTTGAGTTCTTGGCTTTGATAATACCAGTGGCCATGGCATTGGAGCTGCAGGCTTCAATGCTGAAGGTTCAGTTTTTCGGAATGATTTATTCCTCTGATCCTTTGCTTTGCCATGTTGTTTTGACAATGTACCGGCCGTTTTTGGATGCGTTTGATGGGCAGGAGGGGCAGATTGCGAGCCGGCTTATGCTGCTTTCGAGGGAAACGCAGCAGCAGTTGGTGTTTAGATTGCTGGGGTTGCATTGGTTGTTGGGTTTCAGTGAGTTGGTGTTGAGTAGAGAAGTGAGGAAAGTGAAGGGCATTGTTGATATGGGGTTGAGATTTTATCCCAGTGTGTTTGATCCGCTGGCTTTGAAAGCGTTGAAGCTTGACCTGCTTGCCTTTTGCTCCATTTGTGTTGATATGTTGAAATTAGAGGGTGTTTCGGGTGAGGACACGGGGAATGATAAGTTGGTGGTGAAGGTGTTTCAAGATGGACTTGTTTCTGTATCTGCCTTCAAATGGTTACCTCCACACAGCACGGAAACTGCAGTAGCATTTCGAAGCTTGCATAGGTTCTTGATTGGGGCATCAACTCATTTAGACAATGATCCTTCGACCACTAGAAGTCTCATGGACTCCACCACTTTCACTTCCATACAGGGGATACTGGTGGACCTGATGTTGGAGTGTCGGAGATTGGTTCCAGTGATTGTTGCTTTAACTGATCGCTTGTTTGGTTGTCAAAAGCACCGTTGGTTAGGAGAGCGTCTGCTGCAGACTTTTGATCAGCATTTGCTTCCAAAAGTCAAATTGGATTATACTTTGGTTTCTTGCTTCCCAATATTTGATAAAATTGCTGAATCTGATACAATTCCTCCTCGAGGATTGCTAGAGCTGCTTACCAAGTTCATGGCCTTCCTTGTTGTCAAACATGGCCCATATACAGGACTGAGGTCATGGTCTCAGGGAAGCAGAGTTCTTGGCATCTGTCGAACCTTTCTGATGCATCACCACAGCTCTAGATTATTCCTCAGATTATCTCGCCTTTTTGCATTCACTTGCCTTTACTTTCCTGATTTGGAGGTTCGCGACAATGCAAGGATCTACCTTCGGTTGCTGATCTGTGTACCAGGAAAAAAGCTCAGGGACATGCTAAATCTTGGGGAAGAACTCGGTATTTCACCATCTGCACTTCCCAGTTTTAATATCCAGTCTCCTCTGTCTGCTGACAATCTTAAGAAGTCTAGGAGCATCTCCTCGTATGTCCACCTTGAGCGCATGATTCCCCTACTTGTCAAACAGTCTTGGTCCTTGTCTTTATCATCTTTTGGTTTCGGGAATCATGAATCTGGTTACCCAGAAGGCATCAGAGACAATGAACCCATAATAGAGGAGAGTGATATTGATAGCAGTAGTACTATGCAAATTACCCCAGAATCTGAAAGAATTGATCGACCACAGGAACCATTGCGTGTCATGGATGCAAAGATTTCAGAGATATTAGTAACATTAAGGAGGCATTTCTCATGCATTCCTGATTTCAGACATATGCCAGGATTTAAGGTTAGAATATCATGTTGTTTGAGGTTTGAATCAGAGACTTTAAGTCGTATATGGGGACTTGATTCCCCTACTGGTGTGTTGGATGAGTTAGATGCCCTCCCTGCTTTATACGCAACTGTGCTAAACTTTTCGTCGTCTGCACCGTATGGGTCTATTGCATCATATCATATACCTTTTCTTCTTGGTGAACCTCCCAGAAAAACTGATATATCAGATCAAGCAGCCGCTTTAGCTATTGTTTCTGTAGAAAATGGTTCTCAAGAAGAGGATAGCTTCAGAGCTCCAGTAATGATAGAACTGGAACCACGGGAACCTACTCCTGGTCTGATTGATGTTTCCATTGAAACAAATGCAGAAAATGGTCATATAATCCGTGGTCAGCTTCACAGTATCACTATAGGAATAGAGGATATGTTTCTCAAGGCTGTTATACCACCTGACATCCCAGAAGTTGCCTCACCTGGTTATTACTTGGACTTGTTCAATGCTCTTTGGGAGGCATGCGGTAATTCCAACACTGGACGGGAGACCTTCCCATTGAAAGGAGGGAAAGGGGTTGCAGCTATAGCTGGAACCCGGTCAGTCAAGCTACTTGAAGTTCCTGCATCTTCTGTGATTCAGGCAACTGAGCGCTACTTGGCACCATTTGTTGTAAGTGTGATTGGCGAACCACTTGTTAGTGCTGTTAGAGACGGAGGAATCATTAGGGACGTCATATGGAGGGATGAGGCCTCCGATTCTGCACTTGATATTACTACCTCCGGTTCTGAGTTCGATAGAGGTCCTCTTCATCTTACGTACACTGATGATGTAGACGAAAGGGACAGCGTTGTCAATACCCGTAAGAAAAACATGGGCTGCTTCCTCATTTTGATATTTCTACCTCCAAGGTTCCATCTCCTCTTCCAAATGGAAGTGTGTGATGTTTCAACATTGGTACGAATTCGAACTGACCACTGGCCGTGCCTAGCTTATACGGATGGTTATTTGGAAGCTTTATTTTTGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1117

Amino Acids

124.84

Weight (kDa)

5.75

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP5B1_middle PF21588 244 - 641 3.1e-26 AP5B1, middle domain
AP5B1_C PF21590 1065 - 1113 7.2e-07 AP5B1, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011344)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 766
AasI GACNNNNNNGTC 2 cut(s) 401, 3173
AatII GACGTC 1 cut(s) 3057
AbsI CCTCGAGG 1 cut(s) 1659
Acc36I ACCTGC 2 cut(s) 766, 1179
AccB1I GGYRCC 3 cut(s) 655, 664, 2983
AccBSI CCGCTC 2 cut(s) 22, 226
AccI GTMKAC 2 cut(s) 447, 3156
AccII CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
AclWI GGATC 5 cut(s) 289, 890, 1133, 1382, 1889
AcoI YGGCCR 4 cut(s) 770, 828, 932, 3302
AcsI RAATTY 2 cut(s) 173, 3285
AcuI CTGAAG 2 cut(s) 881, 2602
AcyI GRCGYC 4 cut(s) 315, 444, 785, 3054
AfaI GTAC 7 cut(s) 128, 503, 929, 1908, 2197, 3143, 3282
AfeI AGCGCT 1 cut(s) 2975
AflII CTTAAG 1 cut(s) 2015
AgeI ACCGGT 1 cut(s) 111
AhdI GACNNNNNGTC 1 cut(s) 2385
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 6 cut(s) 399, 453, 1909, 2332, 2662, 2803
AjuI GAANNNNNNNTTGG 2 cut(s) 1232, 1264
AloI GAACNNNNNNTCC 4 cut(s) 697, 729, 1740, 1772
Alw21I GWGCWC 2 cut(s) 679, 2626
Alw26I GTCTC 8 cut(s) 164, 1412, 1746, 1998, 2145, 2372, 2864, 3027
AlwI GGATC 5 cut(s) 289, 890, 1133, 1382, 1889
AlwNI CAGNNNCTG 1 cut(s) 2219
Ama87I CYCGRG 1 cut(s) 1659
Aor51HI AGCGCT 1 cut(s) 2975
AoxI GGCC 8 cut(s) 397, 770, 828, 932, 1692, 1714, 3072, 3302
ApoI RAATTY 2 cut(s) 173, 3285
AsiGI ACCGGT 1 cut(s) 111
AspLEI GCGC 7 cut(s) 101, 171, 290, 486, 574, 2058, 2976
AspS9I GGNCC 6 cut(s) 24, 117, 1453, 1715, 2088, 3125
AsuC2I CCSGG 3 cut(s) 242, 703, 2920
AsuHPI GGTGA 9 cut(s) 316, 352, 703, 1238, 1267, 1781, 1953, 2540, 2793
AsuII TTCGAA 2 cut(s) 1339, 3289
AvaI CYCGRG 1 cut(s) 1659
AvaII GGWCC 5 cut(s) 24, 117, 1453, 2088, 3125
AxyI CCTNAGG 1 cut(s) 681
BalI TGGCCA 1 cut(s) 830
BanI GGYRCC 3 cut(s) 655, 664, 2983
BanII GRGCYC 1 cut(s) 2626
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 2 cut(s) 679, 2626
BbvCI CCTCAGC 1 cut(s) 740
BccI CCATC 7 cut(s) 305, 790, 947, 1265, 1972, 3246, 3317
BceAI ACGGC 8 cut(s) 22, 412, 449, 457, 652, 772, 919, 3289
BciT130I CCWGG 6 cut(s) 401, 455, 1911, 2334, 2664, 2805
BciVI GTATCC 1 cut(s) 1437
BclI TGATCA 1 cut(s) 1564
BcnI CCSGG 3 cut(s) 242, 703, 2920
BcoDI GTCTC 8 cut(s) 164, 1412, 1746, 1998, 2145, 2372, 2864, 3027
BfaI CTAG 5 cut(s) 1401, 1670, 1800, 2025, 3311
BfmI CTRYAG 6 cut(s) 845, 1326, 1553, 2586, 2739, 2907
BfoI RGCGCY 1 cut(s) 2977
BfrI CTTAAG 1 cut(s) 2015
BfuAI ACCTGC 2 cut(s) 766, 1179
BfuI GTATCC 1 cut(s) 1437
BmcAI AGTACT 1 cut(s) 2197
Bme1390I CCNGG 9 cut(s) 242, 401, 455, 703, 1911, 2334, 2664, 2805, 2920
Bme18I GGWCC 5 cut(s) 24, 117, 1453, 2088, 3125
BmeRI GACNNNNNGTC 1 cut(s) 2385
BmeT110I CYCGRG 1 cut(s) 1659
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 6 cut(s) 24, 117, 1453, 1715, 2088, 3125
BmrFI CCNGG 9 cut(s) 242, 401, 455, 703, 1911, 2334, 2664, 2805, 2920
BmrI ACTGGG 3 cut(s) 73, 1122, 1971
BmuI ACTGGG 3 cut(s) 73, 1122, 1971
BoxI GACNNNNGTC 1 cut(s) 1732
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 3 cut(s) 173, 785, 2610
Bpu10I CCTNAGC 2 cut(s) 740, 1922
Bpu14I TTCGAA 2 cut(s) 1339, 3289
BpuEI CTTGAG 5 cut(s) 167, 320, 2072, 2586, 2747
BpuMI CCSGG 3 cut(s) 242, 703, 2920
BsaAI YACGTR 1 cut(s) 3141
BsaBI GATNNNNATC 1 cut(s) 371
BsaHI GRCGYC 4 cut(s) 315, 444, 785, 3054
BsaI GGTCTC 2 cut(s) 1746, 2864
BsaJI CCNNGG 6 cut(s) 38, 439, 831, 2648, 2716, 3230
BsaWI WCCGGW 3 cut(s) 16, 111, 3104
BsaXI ACNNNNNCTCC 6 cut(s) 230, 260, 485, 515, 1639, 1669
Bse118I RCCGGY 3 cut(s) 111, 930, 978
Bse21I CCTNAGG 1 cut(s) 681
Bse3DI GCAATG 1 cut(s) 2246
Bse8I GATNNNNATC 1 cut(s) 371
BseBI CCWGG 6 cut(s) 401, 455, 1911, 2334, 2664, 2805
BseDI CCNNGG 6 cut(s) 38, 439, 831, 2648, 2716, 3230
BseGI GGATG 8 cut(s) 233, 801, 949, 2266, 2431, 2784, 3073, 3328
BseJI GATNNNNATC 1 cut(s) 371
BseMI GCAATG 1 cut(s) 2246
BseMII CTCAG 8 cut(s) 695, 731, 1721, 1757, 1825, 1936, 2961, 3102
BseRI GAGGAG 7 cut(s) 669, 757, 1647, 1986, 2026, 2186, 3233
BseX3I CGGCCG 1 cut(s) 932
BseYI CCCAGC 1 cut(s) 1030
BsgI GTGCAG 3 cut(s) 1953, 2466, 3069
Bsh1236I CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
Bsh1285I CGRYCG 5 cut(s) 369, 423, 451, 600, 935
BshFI GGCC 8 cut(s) 399, 772, 830, 934, 1694, 1716, 3074, 3304
BshNI GGYRCC 3 cut(s) 655, 664, 2983
BshTI ACCGGT 1 cut(s) 111
BsiEI CGRYCG 5 cut(s) 369, 423, 451, 600, 935
BsiHKAI GWGCWC 2 cut(s) 679, 2626
BsiHKCI CYCGRG 1 cut(s) 1659
BsiSI CCGG 8 cut(s) 17, 112, 242, 702, 931, 979, 2920, 3105
BslFI GGGAC 5 cut(s) 10, 1940, 2412, 3065, 3179
BsmAI GTCTC 8 cut(s) 164, 1412, 1746, 1998, 2145, 2372, 2864, 3027
BsmBI CGTCTC 1 cut(s) 3027
BsmFI GGGAC 5 cut(s) 10, 1940, 2412, 3065, 3179
BsmI GAATGC 2 cut(s) 1832, 2310
BsnI GGCC 8 cut(s) 399, 772, 830, 934, 1694, 1716, 3074, 3304
Bso31I GGTCTC 2 cut(s) 1746, 2864
BsoBI CYCGRG 1 cut(s) 1659
Bsp119I TTCGAA 2 cut(s) 1339, 3289
Bsp1286I GDGCHC 2 cut(s) 679, 2626
Bsp19I CCATGG 1 cut(s) 831
Bsp68I TCGCGA 2 cut(s) 620, 1869
BspANI GGCC 8 cut(s) 399, 772, 830, 934, 1694, 1716, 3074, 3304
BspCNI CTCAG 8 cut(s) 694, 732, 1722, 1756, 1824, 1935, 2962, 3103
BspFNI CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
BspHI TCATGA 1 cut(s) 2122
BspMAI CTGCAG 3 cut(s) 849, 1330, 1557
BspMI ACCTGC 2 cut(s) 766, 1179
BspPI GGATC 5 cut(s) 289, 890, 1133, 1382, 1889
BspQI GCTCTTC 1 cut(s) 233
BspT104I TTCGAA 2 cut(s) 1339, 3289
BspT107I GGYRCC 3 cut(s) 655, 664, 2983
BspTI CTTAAG 1 cut(s) 2015
BspTNI GGTCTC 2 cut(s) 1746, 2864
BsrBI CCGCTC 2 cut(s) 22, 226
BsrDI GCAATG 1 cut(s) 2246
BsrFI RCCGGY 3 cut(s) 111, 930, 978
BssAI RCCGGY 3 cut(s) 111, 930, 978
BssECI CCNNGG 6 cut(s) 38, 439, 831, 2648, 2716, 3230
BssNI GRCGYC 4 cut(s) 315, 444, 785, 3054
BssT1I CCWWGG 2 cut(s) 831, 3230
Bst2UI CCWGG 6 cut(s) 401, 455, 1911, 2334, 2664, 2805
Bst4CI ACNGT 8 cut(s) 421, 601, 655, 1532, 2082, 2461, 2487, 2732
Bst6I CTCTTC 5 cut(s) 204, 233, 2601, 3135, 3251
BstACI GRCGYC 4 cut(s) 315, 444, 785, 3054
BstAFI CTTAAG 1 cut(s) 2015
BstAPI GCANNNNNTGC 1 cut(s) 349
BstBAI YACGTR 1 cut(s) 3141
BstBI TTCGAA 2 cut(s) 1339, 3289
BstDEI CTNAG 8 cut(s) 681, 740, 1730, 1743, 1811, 1922, 2970, 3111
BstDSI CCRYGG 5 cut(s) 38, 439, 831, 2648, 2716
BstEII GGTNACC 2 cut(s) 1302, 2132
BstENI CCTNNNNNAGG 1 cut(s) 1659
BstF5I GGATG 8 cut(s) 233, 801, 949, 2266, 2431, 2784, 3073, 3328
BstFNI CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
BstH2I RGCGCY 1 cut(s) 2977
BstHHI GCGC 7 cut(s) 101, 171, 290, 486, 574, 2058, 2976
BstMAI GTCTC 8 cut(s) 164, 1412, 1746, 1998, 2145, 2372, 2864, 3027
BstMCI CGRYCG 5 cut(s) 369, 423, 451, 600, 935
BstNI CCWGG 6 cut(s) 401, 455, 1911, 2334, 2664, 2805
BstNSI RCATGY 3 cut(s) 391, 1933, 2847
BstPAI GACNNNNGTC 1 cut(s) 1732
BstPI GGTNACC 2 cut(s) 1302, 2132
BstSCI CCNGG 9 cut(s) 240, 399, 453, 701, 1909, 2332, 2662, 2803, 2918
BstSFI CTRYAG 6 cut(s) 845, 1326, 1553, 2586, 2739, 2907
BstSNI TACGTA 1 cut(s) 3141
BstUI CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 1 cut(s) 1881
BstXI CCANNNNNNTGG 2 cut(s) 838, 1690
BstYI RGATCY 1 cut(s) 1881
BstZI CGGCCG 1 cut(s) 932
Bsu36I CCTNAGG 1 cut(s) 681
BsuI GTATCC 1 cut(s) 1437
BsuRI GGCC 8 cut(s) 399, 772, 830, 934, 1694, 1716, 3074, 3304
BtgI CCRYGG 5 cut(s) 38, 439, 831, 2648, 2716
BtgZI GCGATG 1 cut(s) 358
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 8 cut(s) 233, 801, 949, 2266, 2431, 2784, 3073, 3328
BtsIMutI CAGTG 8 cut(s) 679, 831, 1063, 1135, 1491, 2859, 3144, 3298
BtuMI TCGCGA 2 cut(s) 620, 1869
BveI ACCTGC 2 cut(s) 766, 1179
CaiI CAGNNNCTG 1 cut(s) 2219
CciI TCATGA 1 cut(s) 2122
CfoI GCGC 7 cut(s) 101, 171, 290, 486, 574, 2058, 2976
Cfr10I RCCGGY 3 cut(s) 111, 930, 978
Cfr13I GGNCC 6 cut(s) 24, 117, 1453, 1715, 2088, 3125
CseI GACGC 5 cut(s) 304, 433, 571, 793, 1535
CsiI ACCWGGT 1 cut(s) 2803
Csp6I GTAC 7 cut(s) 127, 502, 928, 1907, 2196, 3142, 3281
CspAI ACCGGT 1 cut(s) 111
CviQI GTAC 7 cut(s) 127, 502, 928, 1907, 2196, 3142, 3281
DdeI CTNAG 8 cut(s) 681, 740, 1730, 1743, 1811, 1922, 2970, 3111
DrdI GACNNNNNNGTC 2 cut(s) 401, 3173
DriI GACNNNNNGTC 1 cut(s) 2385
DseDI GACNNNNNNGTC 2 cut(s) 401, 3173
EaeI YGGCCR 4 cut(s) 770, 828, 932, 3302
EagI CGGCCG 1 cut(s) 932
Eam1104I CTCTTC 5 cut(s) 204, 233, 2601, 3135, 3251
Eam1105I GACNNNNNGTC 1 cut(s) 2385
EarI CTCTTC 5 cut(s) 204, 233, 2601, 3135, 3251
EciI GGCGGA 1 cut(s) 543
Ecl136II GAGCTC 1 cut(s) 2624
EclXI CGGCCG 1 cut(s) 932
Eco105I TACGTA 1 cut(s) 3141
Eco130I CCWWGG 2 cut(s) 831, 3230
Eco147I AGGCCT 1 cut(s) 3074
Eco24I GRGCYC 1 cut(s) 2626
Eco31I GGTCTC 2 cut(s) 1746, 2864
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 5 cut(s) 24, 117, 1453, 2088, 3125
Eco47III AGCGCT 1 cut(s) 2975
Eco52I CGGCCG 1 cut(s) 932
Eco53kI GAGCTC 1 cut(s) 2624
Eco57I CTGAAG 2 cut(s) 881, 2602
Eco81I CCTNAGG 1 cut(s) 681
Eco88I CYCGRG 1 cut(s) 1659
Eco91I GGTNACC 2 cut(s) 1302, 2132
EcoICRI GAGCTC 1 cut(s) 2624
EcoNI CCTNNNNNAGG 1 cut(s) 1659
EcoO109I RGGNCCY 1 cut(s) 3125
EcoO65I GGTNACC 2 cut(s) 1302, 2132
EcoRI GAATTC 2 cut(s) 173, 3285
EcoRII CCWGG 6 cut(s) 399, 453, 1909, 2332, 2662, 2803
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 831, 3230
EcoT22I ATGCAT 2 cut(s) 1788, 2312
EcoT38I GRGCYC 1 cut(s) 2626
ErhI CCWWGG 2 cut(s) 831, 3230
Esp3I CGTCTC 1 cut(s) 3027
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 5 cut(s) 10, 1940, 2412, 3065, 3179
FauI CCCGC 2 cut(s) 231, 313
FauNDI CATATG 2 cut(s) 2328, 3059
FbaI TGATCA 1 cut(s) 1564
FblI GTMKAC 2 cut(s) 447, 3156
FokI GGATG 8 cut(s) 220, 808, 956, 2273, 2438, 2771, 3080, 3335
FriOI GRGCYC 1 cut(s) 2626
FspBI CTAG 5 cut(s) 1401, 1670, 1800, 2025, 3311
GlaI GCGC 7 cut(s) 100, 170, 289, 485, 573, 2057, 2975
GsaI CCCAGC 1 cut(s) 1034
GsuI CTGGAG 3 cut(s) 173, 785, 2610
HaeII RGCGCY 1 cut(s) 2977
HaeIII GGCC 8 cut(s) 399, 772, 830, 934, 1694, 1716, 3074, 3304
HapII CCGG 8 cut(s) 17, 112, 242, 702, 931, 979, 2920, 3105
HgaI GACGC 5 cut(s) 304, 433, 571, 793, 1535
HhaI GCGC 7 cut(s) 101, 171, 290, 486, 574, 2058, 2976
Hin1I GRCGYC 4 cut(s) 315, 444, 785, 3054
Hin6I GCGC 7 cut(s) 99, 169, 288, 484, 572, 2056, 2974
HinP1I GCGC 7 cut(s) 99, 169, 288, 484, 572, 2056, 2974
HincII GTYRAC 2 cut(s) 448, 783
HindII GTYRAC 2 cut(s) 448, 783
HindIII AAGCTT 3 cut(s) 1163, 1342, 3336
HpaII CCGG 8 cut(s) 17, 112, 242, 702, 931, 979, 2920, 3105
HphI GGTGA 9 cut(s) 316, 352, 703, 1238, 1267, 1781, 1953, 2540, 2793
Hpy99I CGWCG 8 cut(s) 83, 398, 449, 470, 605, 620, 655, 2479
HpyCH4III ACNGT 8 cut(s) 421, 601, 655, 1532, 2082, 2461, 2487, 2732
HpyCH4IV ACGT 3 cut(s) 321, 3054, 3140
HpyF3I CTNAG 8 cut(s) 681, 740, 1730, 1743, 1811, 1922, 2970, 3111
HpySE526I ACGT 3 cut(s) 321, 3054, 3140
Hsp92I GRCGYC 4 cut(s) 315, 444, 785, 3054
HspAI GCGC 7 cut(s) 99, 169, 288, 484, 572, 2056, 2974
KroI GCCGGC 1 cut(s) 978
KroNI GCCGGC 1 cut(s) 980
Ksp22I TGATCA 1 cut(s) 1564
LguI GCTCTTC 1 cut(s) 233
MabI ACCWGGT 1 cut(s) 2803
MaeI CTAG 5 cut(s) 1401, 1670, 1800, 2025, 3311
MaeII ACGT 3 cut(s) 321, 3054, 3140
MaeIII GTNAC 6 cut(s) 49, 322, 358, 1302, 2132, 2284
MbiI CCGCTC 2 cut(s) 22, 226
MboII GAAGA 9 cut(s) 193, 220, 221, 1958, 2513, 2618, 2943, 3122, 3238
MflI RGATCY 1 cut(s) 1881
MhlI GDGCHC 2 cut(s) 679, 2626
MlsI TGGCCA 1 cut(s) 830
MluCI AATT 9 cut(s) 173, 1208, 1589, 1632, 1650, 2205, 2226, 2851, 3285
MluNI TGGCCA 1 cut(s) 830
MlyI GAGTC 3 cut(s) 239, 550, 1409
MmeI TCCRAC 7 cut(s) 243, 261, 471, 1443, 1451, 2403, 2880
Mox20I TGGCCA 1 cut(s) 830
Mph1103I ATGCAT 2 cut(s) 1788, 2312
MroNI GCCGGC 1 cut(s) 978
MscI TGGCCA 1 cut(s) 830
MseI TTAA 6 cut(s) 1499, 1983, 2016, 2291, 2340, 2384
Msp20I TGGCCA 1 cut(s) 830
MspA1I CMGCKG 1 cut(s) 1144
MspCI CTTAAG 1 cut(s) 2015
MspI CCGG 8 cut(s) 17, 112, 242, 702, 931, 979, 2920, 3105
MspR9I CCNGG 9 cut(s) 242, 401, 455, 703, 1911, 2334, 2664, 2805, 2920
Mva1269I GAATGC 2 cut(s) 1832, 2310
MvaI CCWGG 6 cut(s) 401, 455, 1911, 2334, 2664, 2805
MvnI CGCG 9 cut(s) 125, 171, 288, 365, 470, 486, 572, 620, 1869
NaeI GCCGGC 1 cut(s) 980
NciI CCSGG 3 cut(s) 242, 703, 2920
NcoI CCATGG 1 cut(s) 831
NdeI CATATG 2 cut(s) 2328, 3059
NgoMIV GCCGGC 1 cut(s) 978
NmeAIII GCCGAG 1 cut(s) 609
NmuCI GTSAC 3 cut(s) 49, 322, 358
NruI TCGCGA 2 cut(s) 620, 1869
NsiI ATGCAT 2 cut(s) 1788, 2312
NspI RCATGY 3 cut(s) 391, 1933, 2847
NspV TTCGAA 2 cut(s) 1339, 3289
PaeI GCATGC 1 cut(s) 2847
PaeR7I CTCGAG 1 cut(s) 1659
PagI TCATGA 1 cut(s) 2122
PaqCI CACCTGC 1 cut(s) 766
PceI AGGCCT 1 cut(s) 3074
PciSI GCTCTTC 1 cut(s) 233
PcsI WCGNNNNNNNCGW 3 cut(s) 204, 402, 2483
PctI GAATGC 2 cut(s) 1832, 2310
PdiI GCCGGC 1 cut(s) 980
PfoI TCCNGGA 1 cut(s) 701
PinAI ACCGGT 1 cut(s) 111
Ple19I CGATCG 1 cut(s) 369
PleI GAGTC 3 cut(s) 239, 549, 1409
PpsI GAGTC 3 cut(s) 239, 549, 1409
Ppu21I YACGTR 1 cut(s) 3141
PpuMI RGGWCCY 1 cut(s) 3125
PshAI GACNNNNGTC 1 cut(s) 1732
Psp124BI GAGCTC 1 cut(s) 2626
Psp5II RGGWCCY 1 cut(s) 3125
Psp6I CCWGG 6 cut(s) 399, 453, 1909, 2332, 2662, 2803
PspEI GGTNACC 2 cut(s) 1302, 2132
PspFI CCCAGC 1 cut(s) 1030
PspGI CCWGG 6 cut(s) 399, 453, 1909, 2332, 2662, 2803
PspPI GGNCC 6 cut(s) 24, 117, 1453, 1715, 2088, 3125
PspPPI RGGWCCY 1 cut(s) 3125
PspXI VCTCGAGB 1 cut(s) 1659
PstI CTGCAG 3 cut(s) 849, 1330, 1557
PstNI CAGNNNCTG 1 cut(s) 2219
PsuI RGATCY 1 cut(s) 1881
PvuI CGATCG 1 cut(s) 369
RruI TCGCGA 2 cut(s) 620, 1869
RsaI GTAC 7 cut(s) 128, 503, 929, 1908, 2197, 3143, 3282
RsaNI GTAC 7 cut(s) 127, 502, 928, 1907, 2196, 3142, 3281
SacI GAGCTC 1 cut(s) 2626
SalI GTCGAC 1 cut(s) 446
SapI GCTCTTC 1 cut(s) 233
SaqAI TTAA 6 cut(s) 1499, 1983, 2016, 2291, 2340, 2384
Sau96I GGNCC 6 cut(s) 24, 117, 1453, 1715, 2088, 3125
ScaI AGTACT 1 cut(s) 2197
SchI GAGTC 3 cut(s) 239, 550, 1409
ScrFI CCNGG 9 cut(s) 242, 401, 455, 703, 1911, 2334, 2664, 2805, 2920
SduI GDGCHC 2 cut(s) 679, 2626
SexAI ACCWGGT 1 cut(s) 2803
SfcI CTRYAG 6 cut(s) 845, 1326, 1553, 2586, 2739, 2907
Sfr274I CTCGAG 1 cut(s) 1659
SfuI TTCGAA 2 cut(s) 1339, 3289
SgrAI CRCCGGYG 1 cut(s) 111
SinI GGWCC 5 cut(s) 24, 117, 1453, 2088, 3125
SlaI CTCGAG 1 cut(s) 1659
SmlI CTYRAG 7 cut(s) 182, 335, 1659, 2015, 2051, 2601, 2762
SmoI CTYRAG 7 cut(s) 182, 335, 1659, 2015, 2051, 2601, 2762
SnaBI TACGTA 1 cut(s) 3141
SphI GCATGC 1 cut(s) 2847
Sse9I AATT 9 cut(s) 173, 1208, 1589, 1632, 1650, 2205, 2226, 2851, 3285
SseBI AGGCCT 1 cut(s) 3074
SspI AATATT 1 cut(s) 1623
SspMI CTAG 5 cut(s) 1401, 1670, 1800, 2025, 3311
SstI GAGCTC 1 cut(s) 2626
StuI AGGCCT 1 cut(s) 3074
StyD4I CCNGG 9 cut(s) 240, 399, 453, 701, 1909, 2332, 2662, 2803, 2918
StyI CCWWGG 2 cut(s) 831, 3230
TaaI ACNGT 8 cut(s) 421, 601, 655, 1532, 2082, 2461, 2487, 2732
TaiI ACGT 3 cut(s) 324, 3057, 3143
TaqII GACCGA 1 cut(s) 20
TasI AATT 9 cut(s) 173, 1208, 1589, 1632, 1650, 2205, 2226, 2851, 3285
TatI WGTACW 1 cut(s) 2195
TauI GCSGC 7 cut(s) 37, 99, 108, 380, 572, 775, 2570
Tru1I TTAA 6 cut(s) 1499, 1983, 2016, 2291, 2340, 2384
Tru9I TTAA 6 cut(s) 1499, 1983, 2016, 2291, 2340, 2384
TscAI CASTG 8 cut(s) 679, 831, 1063, 1135, 1491, 2866, 3151, 3305
TseFI GTSAC 3 cut(s) 49, 322, 358
Tsp45I GTSAC 3 cut(s) 49, 322, 358
TspDTI ATGAA 5 cut(s) 596, 1678, 2139, 2172, 3122
TspGWI ACGGA 5 cut(s) 346, 1334, 2705, 3051, 3335
TspRI CASTG 8 cut(s) 679, 831, 1063, 1135, 1491, 2866, 3151, 3305
Vha464I CTTAAG 1 cut(s) 2015
VpaK11BI GGWCC 5 cut(s) 24, 117, 1453, 2088, 3125
XagI CCTNNNNNAGG 1 cut(s) 1659
XapI RAATTY 2 cut(s) 173, 3285
XbaI TCTAGA 1 cut(s) 1799
XceI RCATGY 3 cut(s) 391, 1933, 2847
XhoI CTCGAG 1 cut(s) 1659
XmiI GTMKAC 2 cut(s) 447, 3156
XspI CTAG 5 cut(s) 1401, 1670, 1800, 2025, 3311
ZraI GACGTC 1 cut(s) 3055
ZrmI AGTACT 1 cut(s) 2197
Zsp2I ATGCAT 2 cut(s) 1788, 2312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.