No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24314 AT5G24314 |
| fragaria_vesca | FvH4_7g32020 FvH4_7g32020 |
| malus_domestica | MD01G1223100.v1.1 |
| prunus_persica | Prupe.2G313600_v2.0.a1 Prupe.2G313600_v2.0.a1 |
| pyrus_communis | pycom01g23240 pycom07g26660 |
| rosa_chinensis | RchiOBHm_Chr1g0381631 |
| rosa_laevigata | RLG00000026219 |
| rosa_multiflora | Rmu_co8401605.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00278570 |
| rosa_rugosa | Rorug01G0429800 Rorug06G0289600 |
| rosa_samantha | Rh1AG453100 Rh1BG410100 Rh1CG424700 Rh1DG441900 |
| rosa_wichuraiana | Rw1G039530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 178 |
| Acc36I | ACCTGC | 1 cut(s) | 178 |
| AciI | CCGC | 3 cut(s) | 131, 407, 453 |
| AcoI | YGGCCR | 1 cut(s) | 408 |
| AcsI | RAATTY | 1 cut(s) | 572 |
| AcuI | CTGAAG | 1 cut(s) | 458 |
| AcyI | GRCGYC | 1 cut(s) | 235 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 130 |
| AflIII | ACRYGT | 1 cut(s) | 264 |
| AgeI | ACCGGT | 1 cut(s) | 381 |
| AgsI | TTSAA | 2 cut(s) | 547, 568 |
| AjnI | CCWGG | 2 cut(s) | 297, 550 |
| AluBI | AGCT | 3 cut(s) | 31, 81, 337 |
| AluI | AGCT | 3 cut(s) | 31, 81, 337 |
| Alw26I | GTCTC | 1 cut(s) | 352 |
| AoxI | GGCC | 3 cut(s) | 408, 414, 554 |
| ApoI | RAATTY | 1 cut(s) | 572 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 368, 400 |
| AsiGI | ACCGGT | 1 cut(s) | 381 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 309 |
| AspS9I | GGNCC | 1 cut(s) | 554 |
| AsuHPI | GGTGA | 1 cut(s) | 202 |
| AxyI | CCTNAGG | 2 cut(s) | 125, 519 |
| BccI | CCATC | 2 cut(s) | 320, 476 |
| BceAI | ACGGC | 1 cut(s) | 541 |
| BciT130I | CCWGG | 2 cut(s) | 299, 552 |
| BcoDI | GTCTC | 1 cut(s) | 352 |
| BfuAI | ACCTGC | 1 cut(s) | 178 |
| BisI | GCNGC | 1 cut(s) | 408 |
| BlsI | GCNGC | 1 cut(s) | 409 |
| Bme1390I | CCNGG | 2 cut(s) | 299, 552 |
| BmgT120I | GGNCC | 1 cut(s) | 554 |
| BmrFI | CCNGG | 2 cut(s) | 299, 552 |
| BmsI | GCATC | 1 cut(s) | 490 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 321, 353 |
| BpmI | CTGGAG | 2 cut(s) | 83, 320 |
| BsaHI | GRCGYC | 1 cut(s) | 235 |
| BsaJI | CCNNGG | 3 cut(s) | 90, 411, 551 |
| BsaWI | WCCGGW | 1 cut(s) | 381 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 130 |
| Bse118I | RCCGGY | 1 cut(s) | 381 |
| Bse21I | CCTNAGG | 2 cut(s) | 125, 519 |
| BseBI | CCWGG | 2 cut(s) | 299, 552 |
| BseDI | CCNNGG | 3 cut(s) | 90, 411, 551 |
| BseGI | GGATG | 3 cut(s) | 265, 331, 468 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseMII | CTCAG | 2 cut(s) | 384, 510 |
| BseX3I | CGGCCG | 1 cut(s) | 408 |
| BseYI | CCCAGC | 1 cut(s) | 503 |
| Bsh1285I | CGRYCG | 1 cut(s) | 411 |
| BshFI | GGCC | 3 cut(s) | 410, 416, 556 |
| BshTI | ACCGGT | 1 cut(s) | 381 |
| BsiEI | CGRYCG | 1 cut(s) | 411 |
| BsiSI | CCGG | 1 cut(s) | 382 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BsmAI | GTCTC | 1 cut(s) | 352 |
| BsnI | GGCC | 3 cut(s) | 410, 416, 556 |
| Bsp19I | CCATGG | 1 cut(s) | 90 |
| BspACI | CCGC | 3 cut(s) | 131, 407, 453 |
| BspANI | GGCC | 3 cut(s) | 410, 416, 556 |
| BspCNI | CTCAG | 2 cut(s) | 383, 511 |
| BspMI | ACCTGC | 1 cut(s) | 178 |
| BsrFI | RCCGGY | 1 cut(s) | 381 |
| BssAI | RCCGGY | 1 cut(s) | 381 |
| BssECI | CCNNGG | 3 cut(s) | 90, 411, 551 |
| BssNI | GRCGYC | 1 cut(s) | 235 |
| BssT1I | CCWWGG | 1 cut(s) | 90 |
| Bst2UI | CCWGG | 2 cut(s) | 299, 552 |
| Bst4CI | ACNGT | 2 cut(s) | 157, 491 |
| BstACI | GRCGYC | 1 cut(s) | 235 |
| BstDEI | CTNAG | 4 cut(s) | 125, 370, 482, 519 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstF5I | GGATG | 3 cut(s) | 265, 331, 468 |
| BstMAI | GTCTC | 1 cut(s) | 352 |
| BstMCI | CGRYCG | 1 cut(s) | 411 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 413 |
| BstNI | CCWGG | 2 cut(s) | 299, 552 |
| BstNSI | RCATGY | 1 cut(s) | 268 |
| BstSCI | CCNGG | 2 cut(s) | 297, 550 |
| BstZI | CGGCCG | 1 cut(s) | 408 |
| Bsu36I | CCTNAGG | 2 cut(s) | 125, 519 |
| BsuRI | GGCC | 3 cut(s) | 410, 416, 556 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtsCI | GGATG | 3 cut(s) | 265, 331, 468 |
| BtsIMutI | CAGTG | 1 cut(s) | 162 |
| BveI | ACCTGC | 1 cut(s) | 178 |
| Cfr10I | RCCGGY | 1 cut(s) | 381 |
| Cfr13I | GGNCC | 1 cut(s) | 554 |
| CseI | GACGC | 1 cut(s) | 224 |
| CspAI | ACCGGT | 1 cut(s) | 381 |
| CviAII | CATG | 2 cut(s) | 91, 265 |
| DdeI | CTNAG | 4 cut(s) | 125, 370, 482, 519 |
| EaeI | YGGCCR | 1 cut(s) | 408 |
| EagI | CGGCCG | 1 cut(s) | 408 |
| EclXI | CGGCCG | 1 cut(s) | 408 |
| Eco130I | CCWWGG | 1 cut(s) | 90 |
| Eco52I | CGGCCG | 1 cut(s) | 408 |
| Eco57I | CTGAAG | 1 cut(s) | 458 |
| Eco81I | CCTNAGG | 2 cut(s) | 125, 519 |
| EcoRII | CCWGG | 2 cut(s) | 297, 550 |
| EcoT14I | CCWWGG | 1 cut(s) | 90 |
| ErhI | CCWWGG | 1 cut(s) | 90 |
| FaeI | CATG | 2 cut(s) | 94, 268 |
| FaiI | YATR | 8 cut(s) | 92, 266, 426, 450, 513, 526, 528, 579 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 456, 488 |
| FatI | CATG | 2 cut(s) | 90, 264 |
| FauNDI | CATATG | 1 cut(s) | 526 |
| Fnu4HI | GCNGC | 1 cut(s) | 408 |
| FokI | GGATG | 3 cut(s) | 272, 338, 455 |
| Fsp4HI | GCNGC | 1 cut(s) | 408 |
| GluI | GCNGC | 1 cut(s) | 408 |
| GsaI | CCCAGC | 1 cut(s) | 507 |
| GsuI | CTGGAG | 2 cut(s) | 83, 320 |
| HaeIII | GGCC | 3 cut(s) | 410, 416, 556 |
| HapII | CCGG | 1 cut(s) | 382 |
| HgaI | GACGC | 1 cut(s) | 224 |
| Hin1I | GRCGYC | 1 cut(s) | 235 |
| Hin1II | CATG | 2 cut(s) | 94, 268 |
| HinfI | GANTC | 1 cut(s) | 533 |
| HpaII | CCGG | 1 cut(s) | 382 |
| HphI | GGTGA | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 5 cut(s) | 14, 225, 315, 373, 538 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 355 |
| Hpy99I | CGWCG | 2 cut(s) | 240, 562 |
| HpyAV | CCTTC | 6 cut(s) | 112, 234, 250, 310, 482, 553 |
| HpyCH4III | ACNGT | 2 cut(s) | 157, 491 |
| HpyCH4V | TGCA | 1 cut(s) | 136 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 413 |
| HpyF3I | CTNAG | 4 cut(s) | 125, 370, 482, 519 |
| Hsp92I | GRCGYC | 1 cut(s) | 235 |
| Hsp92II | CATG | 2 cut(s) | 94, 268 |
| LmnI | GCTCC | 1 cut(s) | 202 |
| LweI | GCATC | 1 cut(s) | 490 |
| MaeIII | GTNAC | 1 cut(s) | 485 |
| MboII | GAAGA | 5 cut(s) | 108, 111, 156, 472, 542 |
| MluCI | AATT | 2 cut(s) | 402, 572 |
| MmeI | TCCRAC | 1 cut(s) | 203 |
| MnlI | CCTC | 6 cut(s) | 109, 295, 323, 367, 406, 514 |
| MroXI | GAANNNNTTC | 1 cut(s) | 309 |
| MseI | TTAA | 1 cut(s) | 179 |
| MspA1I | CMGCKG | 1 cut(s) | 81 |
| MspI | CCGG | 1 cut(s) | 382 |
| MspR9I | CCNGG | 2 cut(s) | 299, 552 |
| MvaI | CCWGG | 2 cut(s) | 299, 552 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 413 |
| NcoI | CCATGG | 1 cut(s) | 90 |
| NdeI | CATATG | 1 cut(s) | 526 |
| NlaIII | CATG | 2 cut(s) | 94, 268 |
| NmeAIII | GCCGAG | 1 cut(s) | 436 |
| NspI | RCATGY | 1 cut(s) | 268 |
| PaqCI | CACCTGC | 1 cut(s) | 178 |
| PciI | ACATGT | 1 cut(s) | 264 |
| PdmI | GAANNNNTTC | 1 cut(s) | 309 |
| PfeI | GAWTC | 1 cut(s) | 533 |
| PfoI | TCCNGGA | 1 cut(s) | 297 |
| PinAI | ACCGGT | 1 cut(s) | 381 |
| PkrI | GCNGC | 1 cut(s) | 409 |
| PscI | ACATGT | 1 cut(s) | 264 |
| Psp6I | CCWGG | 2 cut(s) | 297, 550 |
| PspFI | CCCAGC | 1 cut(s) | 503 |
| PspGI | CCWGG | 2 cut(s) | 297, 550 |
| PspPI | GGNCC | 1 cut(s) | 554 |
| PvuII | CAGCTG | 1 cut(s) | 81 |
| SaqAI | TTAA | 1 cut(s) | 179 |
| SatI | GCNGC | 1 cut(s) | 408 |
| Sau96I | GGNCC | 1 cut(s) | 554 |
| ScrFI | CCNGG | 2 cut(s) | 299, 552 |
| SetI | ASST | 9 cut(s) | 33, 83, 192, 223, 312, 321, 339, 480, 520 |
| SfaNI | GCATC | 1 cut(s) | 490 |
| Sse9I | AATT | 2 cut(s) | 402, 572 |
| SsiI | CCGC | 3 cut(s) | 131, 407, 453 |
| StyD4I | CCNGG | 2 cut(s) | 297, 550 |
| StyI | CCWWGG | 1 cut(s) | 90 |
| TaaI | ACNGT | 2 cut(s) | 157, 491 |
| TaqI | TCGA | 2 cut(s) | 238, 354 |
| TasI | AATT | 2 cut(s) | 402, 572 |
| TauI | GCSGC | 1 cut(s) | 410 |
| TfiI | GAWTC | 1 cut(s) | 533 |
| Tru1I | TTAA | 1 cut(s) | 179 |
| Tru9I | TTAA | 1 cut(s) | 179 |
| TscAI | CASTG | 1 cut(s) | 162 |
| TspDTI | ATGAA | 2 cut(s) | 414, 543 |
| TspRI | CASTG | 1 cut(s) | 162 |
| XapI | RAATTY | 1 cut(s) | 572 |
| XceI | RCATGY | 1 cut(s) | 268 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 558 |
| XmnI | GAANNNNTTC | 1 cut(s) | 309 |