Rh2AG327200

DNA repair metallo-beta-lactamase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
47007838 .. 47008296
459 bp
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UTR
Exon/CDS
Intron
Rh2AG327200.1

Sequence Viewer

Length: 366 bp
ATGTCGATCGAAATGCCCAAAGGGCTCCCCTTTTCAGTTGATACATGGAGTCCTTCTTCAAAGAGAAAGAGGCACCATTTCTTAACTCACGCCCACAAAGACCACTCCACTGGGATCTCCTCCCACTTTTCTTACCCGATTTACTCTACCCATCTCACCAAAACCGTCCTTCAACACTACCTCAAGCTTGATGAATCTTTGTTTGTGGGCATTAAAGTTGGGCAATCTGTAGCTATTGATGACCCGGATGGAGCCTTCGCTGATACGGCTTTCGATGCCAATCACTGTCGTGGTATCTATCTTTCATGGTATTATGGATTGGTTTCTTATTGCTTTGTTTCTTTTCTTTCTGGATCTGAACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.62

Weight (kDa)

6.74

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 72
AclWI GGATC 2 cut(s) 122, 361
AgsI TTSAA 2 cut(s) 60, 173
AleI CACNNNNGTG 1 cut(s) 288
AluBI AGCT 2 cut(s) 187, 233
AluI AGCT 2 cut(s) 187, 233
AlwI GGATC 2 cut(s) 122, 361
AsuC2I CCSGG 1 cut(s) 245
AsuHPI GGTGA 1 cut(s) 148
BanI GGYRCC 1 cut(s) 72
BanII GRGCYC 1 cut(s) 27
BccI CCATC 2 cut(s) 159, 242
BceAI ACGGC 1 cut(s) 282
BcgI CGANNNNNNTGC 1 cut(s) 29
BcnI CCSGG 1 cut(s) 245
BfmI CTRYAG 1 cut(s) 228
BglI GCCNNNNNGGC 1 cut(s) 22
Bme1390I CCNGG 1 cut(s) 245
BmiI GGNNCC 3 cut(s) 26, 74, 253
BmrFI CCNGG 1 cut(s) 245
BmrI ACTGGG 1 cut(s) 120
BmsI GCATC 1 cut(s) 265
BmuI ACTGGG 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 167
BpuMI CCSGG 1 cut(s) 245
BsaBI GATNNNNATC 1 cut(s) 279
Bse1I ACTGG 1 cut(s) 115
Bse8I GATNNNNATC 1 cut(s) 279
BseGI GGATG 1 cut(s) 253
BseJI GATNNNNATC 1 cut(s) 279
BseNI ACTGG 1 cut(s) 115
BseRI GAGGAG 1 cut(s) 109
Bsh1285I CGRYCG 1 cut(s) 9
BshNI GGYRCC 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 9
BsiSI CCGG 1 cut(s) 245
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 3 cut(s) 6, 114, 353
BspLI GGNNCC 3 cut(s) 26, 74, 253
BspPI GGATC 2 cut(s) 122, 361
BspT107I GGYRCC 1 cut(s) 72
BsrI ACTGG 1 cut(s) 115
BssMI GATC 3 cut(s) 6, 114, 353
Bst4CI ACNGT 2 cut(s) 166, 287
BstF5I GGATG 1 cut(s) 253
BstKTI GATC 3 cut(s) 9, 117, 356
BstMBI GATC 3 cut(s) 6, 114, 353
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 3 cut(s) 22, 266, 275
BstSCI CCNGG 1 cut(s) 243
BstSFI CTRYAG 1 cut(s) 228
BstX2I RGATCY 2 cut(s) 114, 353
BstXI CCANNNNNNTGG 1 cut(s) 110
BstYI RGATCY 2 cut(s) 114, 353
BtsCI GGATG 1 cut(s) 253
BtsIMutI CAGTG 2 cut(s) 108, 283
CviAII CATG 2 cut(s) 45, 306
CviJI RGCY 5 cut(s) 25, 187, 233, 254, 269
CviKI_1 RGCY 5 cut(s) 25, 187, 233, 254, 269
DpnI GATC 3 cut(s) 8, 116, 355
DpnII GATC 3 cut(s) 6, 114, 353
Eco24I GRGCYC 1 cut(s) 27
EcoT38I GRGCYC 1 cut(s) 27
FaeI CATG 2 cut(s) 48, 309
FaiI YATR 4 cut(s) 46, 307, 315, 364
FatI CATG 2 cut(s) 44, 305
FokI GGATG 1 cut(s) 260
FriOI GRGCYC 1 cut(s) 27
HapII CCGG 1 cut(s) 245
Hin1II CATG 2 cut(s) 48, 309
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 2 cut(s) 49, 194
HpaII CCGG 1 cut(s) 245
HphI GGTGA 1 cut(s) 148
Hpy188I TCNGA 1 cut(s) 358
Hpy188III TCNNGA 1 cut(s) 351
HpyAV CCTTC 3 cut(s) 63, 179, 265
HpyCH4III ACNGT 2 cut(s) 166, 287
HpyF10VI GCNNNNNNNGC 3 cut(s) 22, 266, 275
Hsp92II CATG 2 cut(s) 48, 309
Kzo9I GATC 3 cut(s) 6, 114, 353
LmnI GCTCC 2 cut(s) 30, 251
LpnPI CCDG 3 cut(s) 96, 258, 336
LweI GCATC 1 cut(s) 265
MalI GATC 3 cut(s) 8, 116, 355
MboI GATC 3 cut(s) 6, 114, 353
MboII GAAGA 1 cut(s) 48
MflI RGATCY 2 cut(s) 114, 353
MhlI GDGCHC 1 cut(s) 27
MlyI GAGTC 1 cut(s) 58
MnlI CCTC 3 cut(s) 63, 130, 191
MseI TTAA 2 cut(s) 83, 213
MslI CAYNNNNRTG 1 cut(s) 288
MspI CCGG 1 cut(s) 245
MspR9I CCNGG 1 cut(s) 245
MwoI GCNNNNNNNGC 3 cut(s) 22, 266, 275
NciI CCSGG 1 cut(s) 245
NdeII GATC 3 cut(s) 6, 114, 353
NlaIII CATG 2 cut(s) 48, 309
NlaIV GGNNCC 3 cut(s) 26, 74, 253
OliI CACNNNNGTG 1 cut(s) 288
PfeI GAWTC 1 cut(s) 194
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 57
PspN4I GGNNCC 3 cut(s) 26, 74, 253
PsuI RGATCY 2 cut(s) 114, 353
PvuI CGATCG 1 cut(s) 9
RseI CAYNNNNRTG 1 cut(s) 288
SaqAI TTAA 2 cut(s) 83, 213
Sau3AI GATC 3 cut(s) 6, 114, 353
SchI GAGTC 1 cut(s) 58
ScrFI CCNGG 1 cut(s) 245
SduI GDGCHC 1 cut(s) 27
SetI ASST 3 cut(s) 183, 189, 235
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 1 cut(s) 228
SmiMI CAYNNNNRTG 1 cut(s) 288
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
StyD4I CCNGG 1 cut(s) 243
TaaI ACNGT 2 cut(s) 166, 287
TaqI TCGA 3 cut(s) 5, 9, 273
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 2 cut(s) 83, 213
Tru9I TTAA 2 cut(s) 83, 213
TscAI CASTG 2 cut(s) 115, 290
TspDTI ATGAA 2 cut(s) 207, 294
TspRI CASTG 2 cut(s) 115, 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.