Rh2AG390900

DNA repair metallo-beta-lactamase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
58639559 .. 58639846
288 bp
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UTR
Exon/CDS
Intron
Rh2AG390900.1

Sequence Viewer

Length: 195 bp
ATGTCGATCGAAATGCCCAAAGGGCTCCCCGTTTCAGTTGATACATGGAGTCCTTCTTCAAAGAGAAAGAGGCACCATTTCTTAACTCACGCCCACAAAGACCACTCCACTGGGATCTCCTCCCACTTTTCTTACCCGATTTACTCTACCCATCTCACCAAAACCGTCCTTCAACACTACCTCAAGCTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.4

Weight (kDa)

9.7

Isoelectric Point (pI)

64.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 72
AclWI GGATC 1 cut(s) 122
AgsI TTSAA 2 cut(s) 60, 173
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
AlwI GGATC 1 cut(s) 122
AsuHPI GGTGA 1 cut(s) 148
BanI GGYRCC 1 cut(s) 72
BanII GRGCYC 1 cut(s) 27
BccI CCATC 1 cut(s) 159
BcgI CGANNNNNNTGC 1 cut(s) 29
BglI GCCNNNNNGGC 1 cut(s) 22
BmiI GGNNCC 2 cut(s) 26, 74
BmrI ACTGGG 1 cut(s) 120
BmuI ACTGGG 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 167
Bse1I ACTGG 1 cut(s) 115
BseNI ACTGG 1 cut(s) 115
BseRI GAGGAG 1 cut(s) 109
Bsh1285I CGRYCG 1 cut(s) 9
BshNI GGYRCC 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 9
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 2 cut(s) 6, 114
BspLI GGNNCC 2 cut(s) 26, 74
BspPI GGATC 1 cut(s) 122
BspT107I GGYRCC 1 cut(s) 72
BsrI ACTGG 1 cut(s) 115
BssMI GATC 2 cut(s) 6, 114
Bst4CI ACNGT 1 cut(s) 166
BstKTI GATC 2 cut(s) 9, 117
BstMBI GATC 2 cut(s) 6, 114
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstX2I RGATCY 1 cut(s) 114
BstXI CCANNNNNNTGG 1 cut(s) 110
BstYI RGATCY 1 cut(s) 114
BtsIMutI CAGTG 1 cut(s) 108
CviAII CATG 1 cut(s) 45
CviJI RGCY 2 cut(s) 25, 187
CviKI_1 RGCY 2 cut(s) 25, 187
DpnI GATC 2 cut(s) 8, 116
DpnII GATC 2 cut(s) 6, 114
Eco24I GRGCYC 1 cut(s) 27
EcoT38I GRGCYC 1 cut(s) 27
FaeI CATG 1 cut(s) 48
FaiI YATR 1 cut(s) 46
FatI CATG 1 cut(s) 44
FriOI GRGCYC 1 cut(s) 27
Hin1II CATG 1 cut(s) 48
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 1 cut(s) 49
HphI GGTGA 1 cut(s) 148
HpyAV CCTTC 2 cut(s) 63, 179
HpyCH4III ACNGT 1 cut(s) 166
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
Hsp92II CATG 1 cut(s) 48
Kzo9I GATC 2 cut(s) 6, 114
LmnI GCTCC 1 cut(s) 30
LpnPI CCDG 1 cut(s) 96
MalI GATC 2 cut(s) 8, 116
MboI GATC 2 cut(s) 6, 114
MboII GAAGA 1 cut(s) 48
MflI RGATCY 1 cut(s) 114
MhlI GDGCHC 1 cut(s) 27
MlyI GAGTC 1 cut(s) 58
MnlI CCTC 3 cut(s) 63, 130, 191
MseI TTAA 2 cut(s) 83, 193
MwoI GCNNNNNNNGC 1 cut(s) 22
NdeII GATC 2 cut(s) 6, 114
NlaIII CATG 1 cut(s) 48
NlaIV GGNNCC 2 cut(s) 26, 74
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 57
PspN4I GGNNCC 2 cut(s) 26, 74
PsuI RGATCY 1 cut(s) 114
PvuI CGATCG 1 cut(s) 9
SaqAI TTAA 2 cut(s) 83, 193
Sau3AI GATC 2 cut(s) 6, 114
SchI GAGTC 1 cut(s) 58
SduI GDGCHC 1 cut(s) 27
SetI ASST 2 cut(s) 183, 189
SgeI CNNG 5 cut(s) 41, 57, 101, 123, 148
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
TaaI ACNGT 1 cut(s) 166
TaqI TCGA 2 cut(s) 5, 9
Tru1I TTAA 2 cut(s) 83, 193
Tru9I TTAA 2 cut(s) 83, 193
TscAI CASTG 1 cut(s) 115
TspRI CASTG 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.