Rh2AG453000

Acyl carrier protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0013707
Physical Location & Seq
Forward (+)
66740155 .. 66741981
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG453000.1

Sequence Viewer

Length: 459 bp
ATGGCTTCTTTTGTTTCAACTTCCCCAATCCCTGTGGCCACTCTGCCTTACACTGCTAAGGCCAGCAGAAGCACAGTTTGCCAAATTAATGGCTTCTCTAGCATTGGAGGTCCAGTGGTTAGAGGGCTAAGAATTATGCCAAAGATCAAGATCACCAAGGCAGCAGAAAGATCATTTCCAGTCCCTAGTTGCTTGAAGACCACAATCTCATGTTCCATCGCTCAACCGGAAACTCTCCAAACTGTTCAAAGCACTATTGCCAAGCAACTATCCGTTGATGAAAGCACCGTCACTCCTCAGACCAAGTTCGCCGATTTGGGGGCAGATTCTCTAGACACTGTTGAAATTATGATGGCTTTGGAGGAGAAGTTTGGTGTGTCCATCGGAGAAGGGGGAGCTGAGAATATCGCTACCGTTCAAGATGCTGCTGATCTGATTGAGAAAGTGAAATCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP-binding

Protein Analysis

152

Amino Acids

15.94

Weight (kDa)

5.46

Isoelectric Point (pI)

54.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP-binding PF00550 80 - 146 2.8e-12 Phosphopantetheine attachment site
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 36
AfiI CCNNNNNNNGG 1 cut(s) 318
AgsI TTSAA 5 cut(s) 18, 196, 248, 344, 419
AluBI AGCT 1 cut(s) 398
AluI AGCT 1 cut(s) 398
AoxI GGCC 2 cut(s) 36, 60
ApeKI GCWGC 2 cut(s) 161, 425
AseI ATTAAT 1 cut(s) 87
AspS9I GGNCC 1 cut(s) 110
AsuHPI GGTGA 1 cut(s) 145
AvaII GGWCC 1 cut(s) 110
BalI TGGCCA 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 203
BbvI GCAGC 2 cut(s) 173, 412
BccI CCATC 3 cut(s) 224, 346, 389
BfaI CTAG 3 cut(s) 99, 186, 332
BisI GCNGC 2 cut(s) 162, 426
BlsI GCNGC 2 cut(s) 163, 427
Bme18I GGWCC 1 cut(s) 110
BmgT120I GGNCC 1 cut(s) 110
BmsI GCATC 1 cut(s) 412
BpiI GAAGAC 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 57
BsaBI GATNNNNATC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 156
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 6 cut(s) 99, 129, 277, 307, 353, 383
Bsc4I CCNNNNNNNGG 1 cut(s) 318
Bse1I ACTGG 2 cut(s) 113, 179
Bse8I GATNNNNATC 1 cut(s) 149
BseDI CCNNGG 1 cut(s) 156
BseJI GATNNNNATC 1 cut(s) 149
BseLI CCNNNNNNNGG 1 cut(s) 318
BseMII CTCAG 2 cut(s) 311, 390
BseNI ACTGG 2 cut(s) 113, 179
BseRI GAGGAG 2 cut(s) 285, 377
BseXI GCAGC 2 cut(s) 173, 412
BshFI GGCC 2 cut(s) 38, 62
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 1 cut(s) 167
BslI CCNNNNNNNGG 1 cut(s) 318
BsmFI GGGAC 1 cut(s) 167
BsnI GGCC 2 cut(s) 38, 62
Bsp143I GATC 4 cut(s) 144, 150, 170, 430
BspANI GGCC 2 cut(s) 38, 62
BspCNI CTCAG 2 cut(s) 310, 391
BsrI ACTGG 2 cut(s) 113, 179
BssECI CCNNGG 1 cut(s) 156
BssMI GATC 4 cut(s) 144, 150, 170, 430
BssT1I CCWWGG 1 cut(s) 156
Bst4CI ACNGT 5 cut(s) 76, 244, 289, 340, 415
BstAPI GCANNNNNTGC 1 cut(s) 78
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 4 cut(s) 57, 128, 297, 399
BstKTI GATC 4 cut(s) 147, 153, 173, 433
BstMBI GATC 4 cut(s) 144, 150, 170, 430
BstMWI GCNNNNNNNGC 2 cut(s) 78, 99
BstV1I GCAGC 2 cut(s) 173, 412
BstV2I GAAGAC 1 cut(s) 203
BstXI CCANNNNNNTGG 1 cut(s) 89
BsuRI GGCC 2 cut(s) 38, 62
BtgZI GCGATG 1 cut(s) 202
BtsI GCAGTG 1 cut(s) 51
BtsIMutI CAGTG 3 cut(s) 51, 120, 336
Cac8I GCNNGC 1 cut(s) 64
Cfr13I GGNCC 1 cut(s) 110
CspCI CAANNNNNGTGG 2 cut(s) 15, 50
CviAII CATG 2 cut(s) 210, 456
CviJI RGCY 7 cut(s) 5, 38, 62, 93, 127, 356, 398
CviKI_1 RGCY 7 cut(s) 5, 38, 62, 93, 127, 356, 398
DdeI CTNAG 4 cut(s) 57, 128, 297, 399
DpnI GATC 4 cut(s) 146, 152, 172, 432
DpnII GATC 4 cut(s) 144, 150, 170, 430
EaeI YGGCCR 1 cut(s) 36
Eco130I CCWWGG 1 cut(s) 156
Eco47I GGWCC 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 156
FaeI CATG 2 cut(s) 213, 459
FaiI YATR 4 cut(s) 137, 211, 350, 457
FaqI GGGAC 1 cut(s) 167
FatI CATG 2 cut(s) 209, 455
Fnu4HI GCNGC 2 cut(s) 162, 426
Fsp4HI GCNGC 2 cut(s) 162, 426
FspBI CTAG 3 cut(s) 99, 186, 332
GluI GCNGC 2 cut(s) 162, 426
HaeIII GGCC 2 cut(s) 38, 62
HapII CCGG 1 cut(s) 227
Hin1II CATG 2 cut(s) 213, 459
HinfI GANTC 1 cut(s) 326
HpaII CCGG 1 cut(s) 227
HphI GGTGA 1 cut(s) 145
Hpy188I TCNGA 3 cut(s) 300, 386, 435
Hpy188III TCNNGA 3 cut(s) 148, 332, 419
HpyAV CCTTC 1 cut(s) 383
HpyCH4III ACNGT 5 cut(s) 76, 244, 289, 340, 415
HpyF10VI GCNNNNNNNGC 2 cut(s) 78, 99
HpyF3I CTNAG 4 cut(s) 57, 128, 297, 399
Hsp92II CATG 2 cut(s) 213, 459
Kzo9I GATC 4 cut(s) 144, 150, 170, 430
LmnI GCTCC 1 cut(s) 395
LpnPI CCDG 5 cut(s) 45, 76, 126, 192, 240
Lsp1109I GCAGC 2 cut(s) 173, 412
LweI GCATC 1 cut(s) 412
MaeI CTAG 3 cut(s) 99, 186, 332
MaeIII GTNAC 1 cut(s) 289
MalI GATC 4 cut(s) 146, 152, 172, 432
MboI GATC 4 cut(s) 144, 150, 170, 430
MboII GAAGA 1 cut(s) 208
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 3 cut(s) 84, 132, 345
MluNI TGGCCA 1 cut(s) 38
MnlI CCTC 4 cut(s) 101, 116, 306, 355
Mox20I TGGCCA 1 cut(s) 38
MscI TGGCCA 1 cut(s) 38
MseI TTAA 1 cut(s) 87
Msp20I TGGCCA 1 cut(s) 38
MspI CCGG 1 cut(s) 227
MwoI GCNNNNNNNGC 2 cut(s) 78, 99
NdeII GATC 4 cut(s) 144, 150, 170, 430
NlaIII CATG 2 cut(s) 213, 459
NmuCI GTSAC 1 cut(s) 289
PfeI GAWTC 1 cut(s) 326
PkrI GCNGC 2 cut(s) 163, 427
PshBI ATTAAT 1 cut(s) 87
PspPI GGNCC 1 cut(s) 110
SaqAI TTAA 1 cut(s) 87
SatI GCNGC 2 cut(s) 162, 426
Sau3AI GATC 4 cut(s) 144, 150, 170, 430
Sau96I GGNCC 1 cut(s) 110
SetI ASST 2 cut(s) 112, 400
SfaNI GCATC 1 cut(s) 412
SinI GGWCC 1 cut(s) 110
Sse9I AATT 3 cut(s) 84, 132, 345
SspMI CTAG 3 cut(s) 99, 186, 332
StyI CCWWGG 1 cut(s) 156
TaaI ACNGT 5 cut(s) 76, 244, 289, 340, 415
TasI AATT 3 cut(s) 84, 132, 345
TfiI GAWTC 1 cut(s) 326
Tru1I TTAA 1 cut(s) 87
Tru9I TTAA 1 cut(s) 87
TscAI CASTG 3 cut(s) 58, 120, 343
TseFI GTSAC 1 cut(s) 289
TseI GCWGC 2 cut(s) 161, 425
Tsp45I GTSAC 1 cut(s) 289
TspDTI ATGAA 1 cut(s) 294
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 3 cut(s) 58, 120, 343
VpaK11BI GGWCC 1 cut(s) 110
VspI ATTAAT 1 cut(s) 87
XbaI TCTAGA 1 cut(s) 331
XspI CTAG 3 cut(s) 99, 186, 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.