Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003656

Physical Location & Seq

Genomic Coordinates Reverse (-)

61610518 .. 61619214

Gene Structure 8697 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG434600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGTTGCTTCCGGTCAGCGGATCAGTGATGAATACCATGATGGATGATATGAACTTGATCCAGCAAGCACAGAGACATCATTTAGTGGTTAGGGAGCTTGGAGAAGAAATTGATTTAGAAATTGGACCGGGGGATGATGATCCTTCATTTGCAAACACCCCCCTCATTGGTGGTCCAACACGAGAGCCTTCTGTTGAGGACAATGATGAGAGCAAAAATATGGTAATGATTTCTCAACTCCGCGGTCACGATCAAGATATGTCAAAGGCACAGCCGGCAAAAAGGAAGAAAAGGGTTGTGAAAAGATGGAGAGAGGAATGGGCTGATACCTACAAATGGGCTTATGTTGATGTCAAGGAAGGGACAGCTAGGATATTTTGCTCTATATGTAGAGAGTACGGTAGGAAGCATAGAAGAAATCCCTATGGAAATGAGGGTAGCCGAAATATGCAGATGAGTGCACTTGAGGAACACAATAATAGTTTGCTTCACAAAGAGGCACTGCGCCTTCAGTTGGCCTCCAAGGATAAGATTATTGTTGACAAACCCATTTATGTCAAAGCTCTTATGTCAAAAACGGCTGGATCAATTGTTGAAGCTGCACTGAAAAGGGATCCTAATGAGGTTGAGTTCATACAATCGGTGCAGGAAGTAGTTCATGCTTTAGAAAGAGTGATCGCAAAAAATTCTCATTATGTAAACATCATGGAGCGGTTGTTAGAGCCTGAGAGAATGATTGTATTCCGAGTTCCATGGGTGGATGATAGAGGTGAGACACATGTTAACCGAGGATTTCGGGTACAATTTAACCAGGCTTTGGGTCCGTGTAGGGGTGGTTTCAGATTTCATCCTTCTATGAGCTTGAGCGTTGCCAAGTTTCTTGCATTTGAACAGACTTTAAGGAATGCTTTGTCACCGTACAAAATTGGAGGGGCAGCAGGTGGAAGTGATTTTGATCCAAAGGGAAAAAGTGATAATGAGGTGATGCGTTTTTGTCAAAGTTTTATGAATGAGATCTATCGCTATTTGGGTATTGACAAGGACCTTCCTTCAGAGGAGATGGGTGTTGGAACTCGGGAAATGGGATATCTTTTTGGACAATATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACGGGGCCAAGGATATTTTGGTCTGGCTCTAGCCTTCGCACTGAAGCTACTGGATATGGTCTGGTTTTCTTTGCACAGCTCTTGCTTGCAGACCTGAATAAAGATTTTAAAGGAATAAGATGTGTTGTAAGCGGCTGTGGAAAGATTGCATTGCATGTCCTGGAGAAGCTTATTGCGTATGGTGCTCTTCCTGTTACAGTTTCTGATTCAAAGGGTTATTTGGTGGATGAAGAAGGGTTTGATTATGACAAAATCGCACTTCTGAGAGAAATAAAAACTCAACAGAGAAGTTTGAGGTTTGTGCTTATGGACATCTGTTTTGAATCTGTTGACCAAATTGCTTTGTATAGGTGTGTAGTTACTTTCAGTTTGATTGTTTTTACATGTGGTATGTGCAGAGACTATTCGAAAACATATGCTCGAGCTAAGTATTACGATGAAGCGAAACCTTGGAATGAAAGGTGTGATGTCGCGTTTCCTTGTGCTACCCAGAATGAAATTGATCAGTCTGATGCCATGAATCTGGTCAATTCAGGTTGTCGTATACTAGTAGAAGGTTCAAATATGCCGTGTACACCAGAGGCTGTTGATGTTCTAAGAAAATCTAATGTTCTAATTGCTCCTGCAGTGGCTGCTGGTGCTGGTGGGGTAAGATTGCTATCTTTGCAATGCATGCATTTTAGATATGCTAAAATAATGATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004353 GO:0004354 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006536 GO:0006537 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009987 GO:0016053 GO:0016491 GO:0016638 GO:0016639 GO:0019752 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00910 ko01100 map00220 map00250 map00910 map01100

Pfam Domains

Protein Families

ELFV_dehydrog ELFV_dehydrog_N

Protein Analysis

614

Amino Acids

69.38

Weight (kDa)

7.83

Isoelectric Point (pI)

35.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C17orf113	PF25431	111 - 174	1.5e-25	C17orf113 probable zinc finger
ELFV_dehydrog_N	PF02812	242 - 369	3.3e-44	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog	PF00208	388 - 599	3.6e-47	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51720 AT1G51720 AT1G51720 AT1G51720
fragaria_vesca	FvH4_6g32960 FvH4_6g32960 FvH4_6g32960 FvH4_6g32960 FvH4_6g32960 FvH4_6g32960 FvH4_6g32960 FvH4_6g32960
malus_domestica	MD09G1196200.v1.1 MD17G1176900.v1.1
prunus_persica	Prupe.3G052600_v2.0.a1 Prupe.3G052600_v2.0.a1
pyrus_communis	pycom09g11330 pycom17g18590
rosa_chinensis	RchiOBHm_Chr2g0142481 RchiOBHm_Chr2g0142511
rosa_laevigata	RLG00000019961
rosa_multiflora	Rmu_sc0007525.1_g000005 Rmu_sc0007525.1_g000011 Rmu_sc0012761.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102570
rosa_rugosa	Rorug02G0373100 Rorug02G0373200
rosa_samantha	Rh2AG424700 Rh2BG434400 Rh2BG434600 Rh2CG411400 Rh2DG444400 Rh2DG444600
rosa_wichuraiana	Rw2G034800 Rw2G034840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	929
AatII	GACGTC	1 cut(s)	1111
Acc36I	ACCTGC	1 cut(s)	929
AccB7I	CCANNNNNTGG	1 cut(s)	817
AccBSI	CCGCTC	1 cut(s)	712
AccI	GTMKAC	1 cut(s)	1681
AccII	CGCG	2 cut(s)	243, 1610
AciI	CCGC	5 cut(s)	18, 241, 243, 712, 1269
AclWI	GGATC	7 cut(s)	28, 52, 134, 592, 608, 621, 950
AcsI	RAATTY	1 cut(s)	685
AcuI	CTGAAG	3 cut(s)	494, 1035, 1200
AcyI	GRCGYC	1 cut(s)	1108
AfaI	GTAC	4 cut(s)	398, 801, 920, 1711
AfiI	CCNNNNNNNGG	6 cut(s)	17, 167, 336, 514, 817, 830
AflIII	ACRYGT	2 cut(s)	778, 1520
AgsI	TTSAA	5 cut(s)	596, 890, 1347, 1460, 1698
AhlI	ACTAGT	1 cut(s)	1684
AjnI	CCWGG	2 cut(s)	810, 1296
Alw21I	GWGCWC	2 cut(s)	463, 1324
Alw26I	GTCTC	3 cut(s)	67, 767, 1530
Alw44I	GTGCAC	1 cut(s)	459
AlwI	GGATC	7 cut(s)	28, 52, 134, 592, 608, 621, 950
AlwNI	CAGNNNCTG	3 cut(s)	1340, 1721, 1769
Ama87I	CYCGRG	2 cut(s)	1074, 1557
AoxI	GGCC	2 cut(s)	516, 1142
ApaLI	GTGCAC	1 cut(s)	459
ApeKI	GCWGC	3 cut(s)	599, 935, 1769
ApoI	RAATTY	1 cut(s)	685
ArsI	GACNNNNNNTTYG	2 cut(s)	1439, 1471
Asp700I	GAANNNNTTC	1 cut(s)	654
AspLEI	GCGC	1 cut(s)	507
AspS9I	GGNCC	5 cut(s)	125, 173, 821, 1042, 1142
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	3 cut(s)	782, 906, 994
AsuII	TTCGAA	1 cut(s)	1544
AvaI	CYCGRG	2 cut(s)	1074, 1557
AvaII	GGWCC	4 cut(s)	125, 173, 821, 1042
BaeGI	GKGCMC	1 cut(s)	463
BamHI	GGATCC	1 cut(s)	613
BauI	CACGAG	1 cut(s)	180
Bbv12I	GWGCWC	2 cut(s)	463, 1324
BbvI	GCAGC	3 cut(s)	586, 947, 1756
BccI	CCATC	3 cut(s)	34, 300, 1054
BceAI	ACGGC	2 cut(s)	594, 1690
BciT130I	CCWGG	2 cut(s)	812, 1298
BclI	TGATCA	1 cut(s)	1639
BcnI	CCSGG	1 cut(s)	129
BcoDI	GTCTC	3 cut(s)	67, 767, 1530
BcuI	ACTAGT	1 cut(s)	1684
BfaI	CTAG	4 cut(s)	369, 1112, 1167, 1685
BfmI	CTRYAG	1 cut(s)	1761
BfuAI	ACCTGC	1 cut(s)	929
BglII	AGATCT	1 cut(s)	1014
BisI	GCNGC	4 cut(s)	600, 936, 1270, 1770
BlsI	GCNGC	4 cut(s)	601, 937, 1271, 1771
Bme1390I	CCNGG	3 cut(s)	129, 812, 1298
Bme18I	GGWCC	4 cut(s)	125, 173, 821, 1042
BmeT110I	CYCGRG	2 cut(s)	1074, 1557
BmgT120I	GGNCC	5 cut(s)	125, 173, 821, 1042, 1142
BmiI	GGNNCC	3 cut(s)	615, 822, 1143
BmrFI	CCNGG	3 cut(s)	129, 812, 1298
BmsI	GCATC	2 cut(s)	975, 1639
BpmI	CTGGAG	1 cut(s)	1319
Bpu14I	TTCGAA	1 cut(s)	1544
BpuEI	CTTGAG	2 cut(s)	485, 883
BpuMI	CCSGG	1 cut(s)	129
BsaBI	GATNNNNATC	3 cut(s)	138, 954, 1795
BsaHI	GRCGYC	1 cut(s)	1108
BsaJI	CCNNGG	7 cut(s)	128, 241, 522, 752, 787, 1145, 1586
BsaWI	WCCGGW	1 cut(s)	10
BsaXI	ACNNNNNCTCC	2 cut(s)	701, 731
Bsc4I	CCNNNNNNNGG	6 cut(s)	17, 167, 336, 514, 817, 830
Bse118I	RCCGGY	1 cut(s)	274
Bse1I	ACTGG	1 cut(s)	1192
Bse3DI	GCAATG	2 cut(s)	1286, 1811
Bse8I	GATNNNNATC	3 cut(s)	138, 954, 1795
BseBI	CCWGG	2 cut(s)	812, 1298
BseDI	CCNNGG	7 cut(s)	128, 241, 522, 752, 787, 1145, 1586
BseGI	GGATG	5 cut(s)	49, 139, 766, 847, 1369
BseJI	GATNNNNATC	3 cut(s)	138, 954, 1795
BseLI	CCNNNNNNNGG	6 cut(s)	17, 167, 336, 514, 817, 830
BseMI	GCAATG	2 cut(s)	1286, 1811
BseMII	CTCAG	2 cut(s)	717, 1391
BseNI	ACTGG	1 cut(s)	1192
BseRI	GAGGAG	1 cut(s)	1070
BseSI	GKGCMC	1 cut(s)	463
BseXI	GCAGC	3 cut(s)	586, 947, 1756
BsgI	GTGCAG	3 cut(s)	585, 665, 1552
Bsh1236I	CGCG	2 cut(s)	243, 1610
BshFI	GGCC	2 cut(s)	518, 1144
BsiHKAI	GWGCWC	2 cut(s)	463, 1324
BsiHKCI	CYCGRG	2 cut(s)	1074, 1557
BsiSI	CCGG	3 cut(s)	11, 128, 275
BslFI	GGGAC	1 cut(s)	376
BslI	CCNNNNNNNGG	6 cut(s)	17, 167, 336, 514, 817, 830
BsmAI	GTCTC	3 cut(s)	67, 767, 1530
BsmFI	GGGAC	1 cut(s)	376
BsmI	GAATGC	1 cut(s)	910
BsnI	GGCC	2 cut(s)	518, 1144
BsoBI	CYCGRG	2 cut(s)	1074, 1557
Bsp119I	TTCGAA	1 cut(s)	1544
Bsp1286I	GDGCHC	2 cut(s)	463, 1324
Bsp1407I	TGTACA	1 cut(s)	1709
Bsp19I	CCATGG	1 cut(s)	752
BspACI	CCGC	5 cut(s)	18, 241, 243, 712, 1269
BspANI	GGCC	2 cut(s)	518, 1144
BspCNI	CTCAG	2 cut(s)	718, 1392
BspFNI	CGCG	2 cut(s)	243, 1610
BspLI	GGNNCC	3 cut(s)	615, 822, 1143
BspMAI	CTGCAG	1 cut(s)	1765
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	7 cut(s)	28, 52, 134, 592, 608, 621, 950
BspQI	GCTCTTC	1 cut(s)	1329
BspT104I	TTCGAA	1 cut(s)	1544
BsrBI	CCGCTC	1 cut(s)	712
BsrDI	GCAATG	2 cut(s)	1286, 1811
BsrFI	RCCGGY	1 cut(s)	274
BsrGI	TGTACA	1 cut(s)	1709
BsrI	ACTGG	1 cut(s)	1192
BssAI	RCCGGY	1 cut(s)	274
BssECI	CCNNGG	7 cut(s)	128, 241, 522, 752, 787, 1145, 1586
BssNAI	GTATAC	1 cut(s)	1682
BssNI	GRCGYC	1 cut(s)	1108
BssSI	CACGAG	1 cut(s)	180
BssT1I	CCWWGG	4 cut(s)	522, 752, 1145, 1586
Bst1107I	GTATAC	1 cut(s)	1682
Bst2BI	CACGAG	1 cut(s)	180
Bst2UI	CCWGG	2 cut(s)	812, 1298
Bst4CI	ACNGT	3 cut(s)	401, 918, 1336
Bst6I	CTCTTC	1 cut(s)	1329
BstACI	GRCGYC	1 cut(s)	1108
BstAPI	GCANNNNNTGC	2 cut(s)	1769, 1810
BstAUI	TGTACA	1 cut(s)	1709
BstBI	TTCGAA	1 cut(s)	1544
BstC8I	GCNNGC	4 cut(s)	66, 276, 1224, 1811
BstDEI	CTNAG	4 cut(s)	726, 1400, 1563, 1733
BstDSI	CCRYGG	2 cut(s)	241, 752
BstF5I	GGATG	5 cut(s)	49, 139, 766, 847, 1369
BstFNI	CGCG	2 cut(s)	243, 1610
BstHHI	GCGC	1 cut(s)	507
BstMAI	GTCTC	3 cut(s)	67, 767, 1530
BstMWI	GCNNNNNNNGC	6 cut(s)	275, 1319, 1769, 1775, 1801, 1810
BstNI	CCWGG	2 cut(s)	812, 1298
BstNSI	RCATGY	4 cut(s)	782, 1295, 1524, 1813
BstSCI	CCNGG	3 cut(s)	127, 810, 1296
BstSFI	CTRYAG	1 cut(s)	1761
BstSLI	GKGCMC	1 cut(s)	463
BstUI	CGCG	2 cut(s)	243, 1610
BstV1I	GCAGC	3 cut(s)	586, 947, 1756
BstX2I	RGATCY	2 cut(s)	613, 1014
BstXI	CCANNNNNNTGG	1 cut(s)	1660
BstYI	RGATCY	2 cut(s)	613, 1014
BstZ17I	GTATAC	1 cut(s)	1682
BsuRI	GGCC	2 cut(s)	518, 1144
BtgI	CCRYGG	2 cut(s)	241, 752
BtsCI	GGATG	5 cut(s)	49, 139, 766, 847, 1369
BtsI	GCAGTG	2 cut(s)	500, 1770
BtsIMutI	CAGTG	5 cut(s)	30, 500, 602, 1176, 1770
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	4 cut(s)	66, 276, 1224, 1811
CaiI	CAGNNNCTG	3 cut(s)	1340, 1721, 1769
CfoI	GCGC	1 cut(s)	507
Cfr10I	RCCGGY	1 cut(s)	274
Cfr13I	GGNCC	5 cut(s)	125, 173, 821, 1042, 1142
Cfr42I	CCGCGG	1 cut(s)	244
Csp6I	GTAC	4 cut(s)	397, 800, 919, 1710
CviAII	CATG	9 cut(s)	37, 659, 706, 753, 779, 1292, 1521, 1654, 1810
CviQI	GTAC	4 cut(s)	397, 800, 919, 1710
DdeI	CTNAG	4 cut(s)	726, 1400, 1563, 1733
DraI	TTTAAA	1 cut(s)	1246
Eam1104I	CTCTTC	1 cut(s)	1329
EarI	CTCTTC	1 cut(s)	1329
Eco130I	CCWWGG	4 cut(s)	522, 752, 1145, 1586
Eco32I	GATATC	1 cut(s)	1088
Eco47I	GGWCC	4 cut(s)	125, 173, 821, 1042
Eco57I	CTGAAG	3 cut(s)	494, 1035, 1200
Eco88I	CYCGRG	2 cut(s)	1074, 1557
EcoO109I	RGGNCCY	1 cut(s)	1042
EcoRII	CCWGG	2 cut(s)	810, 1296
EcoRV	GATATC	1 cut(s)	1088
EcoT14I	CCWWGG	4 cut(s)	522, 752, 1145, 1586
EcoT22I	ATGCAT	2 cut(s)	1811, 1815
ErhI	CCWWGG	4 cut(s)	522, 752, 1145, 1586
FaeI	CATG	9 cut(s)	40, 662, 709, 756, 782, 1295, 1524, 1657, 1813
FalI	AAGNNNNNCTT	2 cut(s)	892, 924
FaqI	GGGAC	1 cut(s)	376
FatI	CATG	9 cut(s)	36, 658, 705, 752, 778, 1291, 1520, 1653, 1809
FauNDI	CATATG	1 cut(s)	1552
FbaI	TGATCA	1 cut(s)	1639
FblI	GTMKAC	1 cut(s)	1681
Fnu4HI	GCNGC	4 cut(s)	600, 936, 1270, 1770
FokI	GGATG	5 cut(s)	56, 146, 773, 834, 1376
Fsp4HI	GCNGC	4 cut(s)	600, 936, 1270, 1770
FspBI	CTAG	4 cut(s)	369, 1112, 1167, 1685
GlaI	GCGC	1 cut(s)	506
GluI	GCNGC	4 cut(s)	600, 936, 1270, 1770
GsuI	CTGGAG	1 cut(s)	1319
HaeIII	GGCC	2 cut(s)	518, 1144
HapII	CCGG	3 cut(s)	11, 128, 275
HhaI	GCGC	1 cut(s)	507
Hin1I	GRCGYC	1 cut(s)	1108
Hin1II	CATG	9 cut(s)	40, 662, 709, 756, 782, 1295, 1524, 1657, 1813
Hin6I	GCGC	1 cut(s)	505
HinP1I	GCGC	1 cut(s)	505
HincII	GTYRAC	3 cut(s)	541, 784, 1468
HindII	GTYRAC	3 cut(s)	541, 784, 1468
HindIII	AAGCTT	1 cut(s)	1304
HinfI	GANTC	3 cut(s)	1343, 1460, 1657
HpaI	GTTAAC	1 cut(s)	784
HpaII	CCGG	3 cut(s)	11, 128, 275
HphI	GGTGA	3 cut(s)	782, 906, 994
Hpy166II	GTNNAC	8 cut(s)	461, 541, 700, 784, 1468, 1682, 1710, 1712
Hpy188I	TCNGA	6 cut(s)	746, 842, 1054, 1342, 1401, 1648
Hpy188III	TCNNGA	3 cut(s)	248, 254, 1076
Hpy8I	GTNNAC	8 cut(s)	461, 541, 700, 784, 1468, 1682, 1710, 1712
HpyCH4III	ACNGT	3 cut(s)	401, 918, 1336
HpyCH4IV	ACGT	1 cut(s)	1108
HpyF10VI	GCNNNNNNNGC	6 cut(s)	275, 1319, 1769, 1775, 1801, 1810
HpyF3I	CTNAG	4 cut(s)	726, 1400, 1563, 1733
HpySE526I	ACGT	1 cut(s)	1108
Hsp92I	GRCGYC	1 cut(s)	1108
Hsp92II	CATG	9 cut(s)	40, 662, 709, 756, 782, 1295, 1524, 1657, 1813
HspAI	GCGC	1 cut(s)	505
KroI	GCCGGC	1 cut(s)	274
KroNI	GCCGGC	1 cut(s)	276
Ksp22I	TGATCA	1 cut(s)	1639
KspAI	GTTAAC	1 cut(s)	784
KspI	CCGCGG	1 cut(s)	244
LguI	GCTCTTC	1 cut(s)	1329
LmnI	GCTCC	3 cut(s)	94, 709, 1762
Lsp1109I	GCAGC	3 cut(s)	586, 947, 1756
LweI	GCATC	2 cut(s)	975, 1639
MaeI	CTAG	4 cut(s)	369, 1112, 1167, 1685
MaeII	ACGT	1 cut(s)	1108
MaeIII	GTNAC	4 cut(s)	245, 912, 1330, 1495
MbiI	CCGCTC	1 cut(s)	712
MboII	GAAGA	5 cut(s)	116, 298, 426, 1316, 1379
MfeI	CAATTG	1 cut(s)	588
MflI	RGATCY	2 cut(s)	613, 1014
MhlI	GDGCHC	2 cut(s)	463, 1324
MmeI	TCCRAC	2 cut(s)	200, 1048
Mph1103I	ATGCAT	2 cut(s)	1811, 1815
MroNI	GCCGGC	1 cut(s)	274
MroXI	GAANNNNTTC	1 cut(s)	654
MseI	TTAA	4 cut(s)	783, 807, 899, 1245
MspA1I	CMGCKG	2 cut(s)	18, 243
MspI	CCGG	3 cut(s)	11, 128, 275
MspR9I	CCNGG	3 cut(s)	129, 812, 1298
MunI	CAATTG	1 cut(s)	588
Mva1269I	GAATGC	1 cut(s)	910
MvaI	CCWGG	2 cut(s)	812, 1298
MvnI	CGCG	2 cut(s)	243, 1610
MwoI	GCNNNNNNNGC	6 cut(s)	275, 1319, 1769, 1775, 1801, 1810
NaeI	GCCGGC	1 cut(s)	276
NciI	CCSGG	1 cut(s)	129
NcoI	CCATGG	1 cut(s)	752
NdeI	CATATG	1 cut(s)	1552
NgoMIV	GCCGGC	1 cut(s)	274
NlaIII	CATG	9 cut(s)	40, 662, 709, 756, 782, 1295, 1524, 1657, 1813
NlaIV	GGNNCC	3 cut(s)	615, 822, 1143
NmuCI	GTSAC	2 cut(s)	245, 912
NsiI	ATGCAT	2 cut(s)	1811, 1815
NspI	RCATGY	4 cut(s)	782, 1295, 1524, 1813
NspV	TTCGAA	1 cut(s)	1544
PaeI	GCATGC	1 cut(s)	1813
PaeR7I	CTCGAG	1 cut(s)	1557
PaqCI	CACCTGC	1 cut(s)	929
PciI	ACATGT	2 cut(s)	778, 1520
PciSI	GCTCTTC	1 cut(s)	1329
PctI	GAATGC	1 cut(s)	910
PdiI	GCCGGC	1 cut(s)	276
PdmI	GAANNNNTTC	1 cut(s)	654
PfeI	GAWTC	3 cut(s)	1343, 1460, 1657
PflMI	CCANNNNNTGG	1 cut(s)	817
PfoI	TCCNGGA	1 cut(s)	1296
PkrI	GCNGC	4 cut(s)	601, 937, 1271, 1771
PpuMI	RGGWCCY	1 cut(s)	1042
PscI	ACATGT	2 cut(s)	778, 1520
Psp5II	RGGWCCY	1 cut(s)	1042
Psp6I	CCWGG	2 cut(s)	810, 1296
PspGI	CCWGG	2 cut(s)	810, 1296
PspN4I	GGNNCC	3 cut(s)	615, 822, 1143
PspPI	GGNCC	5 cut(s)	125, 173, 821, 1042, 1142
PspPPI	RGGWCCY	1 cut(s)	1042
PspXI	VCTCGAGB	1 cut(s)	1557
PsrI	GAACNNNNNNTAC	2 cut(s)	732, 764
PstI	CTGCAG	1 cut(s)	1765
PstNI	CAGNNNCTG	3 cut(s)	1340, 1721, 1769
PsuI	RGATCY	2 cut(s)	613, 1014
RsaI	GTAC	4 cut(s)	398, 801, 920, 1711
RsaNI	GTAC	4 cut(s)	397, 800, 919, 1710
SacII	CCGCGG	1 cut(s)	244
SapI	GCTCTTC	1 cut(s)	1329
SaqAI	TTAA	4 cut(s)	783, 807, 899, 1245
SatI	GCNGC	4 cut(s)	600, 936, 1270, 1770
Sau96I	GGNCC	5 cut(s)	125, 173, 821, 1042, 1142
ScrFI	CCNGG	3 cut(s)	129, 812, 1298
SduI	GDGCHC	2 cut(s)	463, 1324
SfaNI	GCATC	2 cut(s)	975, 1639
SfcI	CTRYAG	1 cut(s)	1761
Sfr274I	CTCGAG	1 cut(s)	1557
Sfr303I	CCGCGG	1 cut(s)	244
SfuI	TTCGAA	1 cut(s)	1544
SgrBI	CCGCGG	1 cut(s)	244
SinI	GGWCC	4 cut(s)	125, 173, 821, 1042
SlaI	CTCGAG	1 cut(s)	1557
SmlI	CTYRAG	3 cut(s)	464, 862, 1557
SmoI	CTYRAG	3 cut(s)	464, 862, 1557
SpeI	ACTAGT	1 cut(s)	1684
SphI	GCATGC	1 cut(s)	1813
SsiI	CCGC	5 cut(s)	18, 241, 243, 712, 1269
SspMI	CTAG	4 cut(s)	369, 1112, 1167, 1685
StyD4I	CCNGG	3 cut(s)	127, 810, 1296
StyI	CCWWGG	4 cut(s)	522, 752, 1145, 1586
TaaI	ACNGT	3 cut(s)	401, 918, 1336
TaiI	ACGT	1 cut(s)	1111
TaqI	TCGA	2 cut(s)	1544, 1558
TatI	WGTACW	1 cut(s)	1709
TauI	GCSGC	1 cut(s)	1272
TfiI	GAWTC	3 cut(s)	1343, 1460, 1657
Tru1I	TTAA	4 cut(s)	783, 807, 899, 1245
Tru9I	TTAA	4 cut(s)	783, 807, 899, 1245
TscAI	CASTG	5 cut(s)	30, 507, 609, 1183, 1770
TseFI	GTSAC	2 cut(s)	245, 912
TseI	GCWGC	3 cut(s)	599, 935, 1769
Tsp45I	GTSAC	2 cut(s)	245, 912
TspGWI	ACGGA	1 cut(s)	813
TspRI	CASTG	5 cut(s)	30, 507, 609, 1183, 1770
Van91I	CCANNNNNTGG	1 cut(s)	817
VneI	GTGCAC	1 cut(s)	459
VpaK11BI	GGWCC	4 cut(s)	125, 173, 821, 1042
XapI	RAATTY	1 cut(s)	685
XceI	RCATGY	4 cut(s)	782, 1295, 1524, 1813
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1152
XhoI	CTCGAG	1 cut(s)	1557
XmiI	GTMKAC	1 cut(s)	1681
XmnI	GAANNNNTTC	1 cut(s)	654
XspI	CTAG	4 cut(s)	369, 1112, 1167, 1685
ZraI	GACGTC	1 cut(s)	1109
Zsp2I	ATGCAT	2 cut(s)	1811, 1815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.