Rw2G034800

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
57316171 .. 57325342
9172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G034800.1

Sequence Viewer

Length: 1149 bp
ATGATTGTATTCCGAGTTCCATGGGTGGATGATAGAGGTGAGACACATGTTAACCGAGGATTTCGGGTACAATTTAACCAGGCTTTGGGTCCCTGTAGGGGTGGTTTCAGATTTCATCCTTCTATGAGCTTGAGCGTTGCCAAGTTTCTTGCATTTGAACAGACTTTAAGGAATGCTTTGTCACCGTACAAAATTGGAGGGGCAGCAGGTGGAAGTGATTTTGATCCAAAGGGAAAAAGTGATAATGAGGTGATGCGTTTTTGTCAAAGTTTTATGAATGAGATCTATCGCTATTTGGGTATTGACAAGGTAACTCGAGGAAGATTCCATTCCAGTAAATATCCACTTCATTTTATATGGATTAATGCTTTATCCTACATGTCTGGTTTAATGCTGTACACACTTTACGACCTTCCTTCAGAGGAGATGGGTGTTGGAACTCGGGAAATGGGATATCTTTTCGGACAATATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACGGGGCCAAGGATATTTTGGTCTGGCTCTAGCCTTCGCACTGAAGCTACTGGATATGGTCTGGTTTTCTTTGCACAGCTCTTGCTTGCAGACCTGAATAAAGATTTTAAAGGAATAAGATGTGTTGTAAGCGGCTGTGGAAAGATTGCATTGCATGTCCTGGAGAAGCTTATTGCGTATGGTGCTCTTCCTGTTACAGTTTCTGATTCAAAGGGTTATTTGGTGGATGAAGAAGGAGACTATTCGAAAACATATGCTCGAGCTAAGTATTACGATGAAGCGAAACCTTGGAATGAAAGGTGTGATGTCGCGTTTCCTTGTGCTACCCAGAATGAAATTGATCAGTCTGATGCCATGAATCTGGTCAATTCAGGTTGTCGTATACTAGTAGAAGGTTCAAATATGCCGTGTACACCAGAGGCTGTTGATGTTCTAAGAAAATCTAATGTTCTAATTGCTCCTGCAGTGGCTGCTGGTGCTGGTGGGGTAGTTGCTGGAGAATTTGAATTGAACCATGAGTGTAATTCAGTGAACTGGTCACCGCAGGACTTTGAGTCTAAGCTACAGGAAGCAATAAAACAAACTTACCAGAGATCCCTTAAAGCAGCGCTTGACTTTGGCTACTCCAAAGAAAGTCCTGAGTGA

Protein Analysis

382

Amino Acids

42.55

Weight (kDa)

6.67

Isoelectric Point (pI)

32.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 2 - 102 3.9e-34 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 177 - 247 1.5e-16 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ELFV_dehydrog PF00208 254 - 372 1e-33 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 197
AatII GACGTC 1 cut(s) 478
Acc36I ACCTGC 1 cut(s) 197
AccB7I CCANNNNNTGG 1 cut(s) 85
AccI GTMKAC 1 cut(s) 886
AccII CGCG 1 cut(s) 815
AciI CCGC 2 cut(s) 636, 1046
AclWI GGATC 2 cut(s) 218, 1092
AcsI RAATTY 1 cut(s) 1004
AcuI CTGAAG 2 cut(s) 402, 567
AcyI GRCGYC 1 cut(s) 475
AfaI GTAC 4 cut(s) 69, 188, 398, 916
AfeI AGCGCT 1 cut(s) 1113
AfiI CCNNNNNNNGG 2 cut(s) 85, 98
AflIII ACRYGT 2 cut(s) 46, 378
AgsI TTSAA 5 cut(s) 158, 714, 903, 1010, 1015
AhdI GACNNNNNGTC 1 cut(s) 1057
AhlI ACTAGT 1 cut(s) 889
AjnI CCWGG 2 cut(s) 78, 663
AluBI AGCT 7 cut(s) 129, 482, 551, 583, 673, 767, 1066
AluI AGCT 7 cut(s) 129, 482, 551, 583, 673, 767, 1066
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 2 cut(s) 35, 735
AlwI GGATC 2 cut(s) 218, 1092
AlwNI CAGNNNCTG 3 cut(s) 707, 926, 974
Ama87I CYCGRG 3 cut(s) 315, 441, 762
Aor51HI AGCGCT 1 cut(s) 1113
AoxI GGCC 1 cut(s) 509
ApeKI GCWGC 3 cut(s) 203, 974, 1109
ApoI RAATTY 1 cut(s) 1004
AseI ATTAAT 1 cut(s) 363
AspLEI GCGC 1 cut(s) 1114
AspS9I GGNCC 2 cut(s) 89, 509
AsuHPI GGTGA 4 cut(s) 50, 174, 262, 1035
AsuII TTCGAA 1 cut(s) 749
AvaI CYCGRG 3 cut(s) 315, 441, 762
AvaII GGWCC 1 cut(s) 89
Bbv12I GWGCWC 1 cut(s) 691
BbvI GCAGC 3 cut(s) 215, 961, 1121
BccI CCATC 1 cut(s) 421
BceAI ACGGC 1 cut(s) 895
BciT130I CCWGG 2 cut(s) 80, 665
BclI TGATCA 1 cut(s) 844
BcoDI GTCTC 2 cut(s) 35, 735
BcuI ACTAGT 1 cut(s) 889
BfaI CTAG 3 cut(s) 479, 534, 890
BfmI CTRYAG 3 cut(s) 94, 966, 1067
BfoI RGCGCY 1 cut(s) 1115
BfuAI ACCTGC 1 cut(s) 197
BglII AGATCT 1 cut(s) 282
BisI GCNGC 4 cut(s) 204, 637, 975, 1110
BlsI GCNGC 4 cut(s) 205, 638, 976, 1111
Bme1390I CCNGG 2 cut(s) 80, 665
Bme18I GGWCC 1 cut(s) 89
BmeRI GACNNNNNGTC 1 cut(s) 1057
BmeT110I CYCGRG 3 cut(s) 315, 441, 762
BmgT120I GGNCC 2 cut(s) 89, 509
BmiI GGNNCC 3 cut(s) 90, 91, 510
BmrFI CCNGG 2 cut(s) 80, 665
BmsI GCATC 2 cut(s) 243, 844
BpmI CTGGAG 2 cut(s) 686, 1020
Bpu14I TTCGAA 1 cut(s) 749
BpuEI CTTGAG 1 cut(s) 151
BsaBI GATNNNNATC 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 475
BsaJI CCNNGG 4 cut(s) 20, 55, 512, 791
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 98
Bse1I ACTGG 3 cut(s) 333, 559, 1043
Bse3DI GCAATG 1 cut(s) 653
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 2 cut(s) 80, 665
BseDI CCNNGG 4 cut(s) 20, 55, 512, 791
BseGI GGATG 3 cut(s) 34, 115, 736
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 2 cut(s) 85, 98
BseMI GCAATG 1 cut(s) 653
BseMII CTCAG 1 cut(s) 1134
BseNI ACTGG 3 cut(s) 333, 559, 1043
BseRI GAGGAG 1 cut(s) 437
BseXI GCAGC 3 cut(s) 215, 961, 1121
Bsh1236I CGCG 1 cut(s) 815
BshFI GGCC 1 cut(s) 511
BsiHKAI GWGCWC 1 cut(s) 691
BsiHKCI CYCGRG 3 cut(s) 315, 441, 762
BslFI GGGAC 1 cut(s) 75
BslI CCNNNNNNNGG 2 cut(s) 85, 98
BsmAI GTCTC 2 cut(s) 35, 735
BsmFI GGGAC 1 cut(s) 75
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 1 cut(s) 511
BsoBI CYCGRG 3 cut(s) 315, 441, 762
Bsp119I TTCGAA 1 cut(s) 749
Bsp1286I GDGCHC 1 cut(s) 691
Bsp1407I TGTACA 2 cut(s) 396, 914
Bsp143I GATC 4 cut(s) 223, 282, 844, 1097
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 2 cut(s) 636, 1046
BspANI GGCC 1 cut(s) 511
BspCNI CTCAG 1 cut(s) 1135
BspFNI CGCG 1 cut(s) 815
BspLI GGNNCC 3 cut(s) 90, 91, 510
BspMAI CTGCAG 1 cut(s) 970
BspMI ACCTGC 1 cut(s) 197
BspPI GGATC 2 cut(s) 218, 1092
BspQI GCTCTTC 1 cut(s) 696
BspT104I TTCGAA 1 cut(s) 749
BsrDI GCAATG 1 cut(s) 653
BsrGI TGTACA 2 cut(s) 396, 914
BsrI ACTGG 3 cut(s) 333, 559, 1043
BssECI CCNNGG 4 cut(s) 20, 55, 512, 791
BssMI GATC 4 cut(s) 223, 282, 844, 1097
BssNAI GTATAC 1 cut(s) 887
BssNI GRCGYC 1 cut(s) 475
BssT1I CCWWGG 3 cut(s) 20, 512, 791
Bst1107I GTATAC 1 cut(s) 887
Bst2UI CCWGG 2 cut(s) 80, 665
Bst4CI ACNGT 2 cut(s) 186, 703
Bst6I CTCTTC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 475
BstAPI GCANNNNNTGC 1 cut(s) 974
BstAUI TGTACA 2 cut(s) 396, 914
BstBI TTCGAA 1 cut(s) 749
BstC8I GCNNGC 1 cut(s) 591
BstDEI CTNAG 4 cut(s) 768, 938, 1062, 1143
BstDSI CCRYGG 1 cut(s) 20
BstEII GGTNACC 1 cut(s) 1041
BstF5I GGATG 3 cut(s) 34, 115, 736
BstFNI CGCG 1 cut(s) 815
BstH2I RGCGCY 1 cut(s) 1115
BstHHI GCGC 1 cut(s) 1114
BstKTI GATC 4 cut(s) 226, 285, 847, 1100
BstMAI GTCTC 2 cut(s) 35, 735
BstMBI GATC 4 cut(s) 223, 282, 844, 1097
BstMWI GCNNNNNNNGC 3 cut(s) 686, 974, 980
BstNI CCWGG 2 cut(s) 80, 665
BstNSI RCATGY 3 cut(s) 50, 382, 662
BstPI GGTNACC 1 cut(s) 1041
BstSCI CCNGG 2 cut(s) 78, 663
BstSFI CTRYAG 3 cut(s) 94, 966, 1067
BstUI CGCG 1 cut(s) 815
BstV1I GCAGC 3 cut(s) 215, 961, 1121
BstX2I RGATCY 2 cut(s) 282, 1097
BstXI CCANNNNNNTGG 1 cut(s) 865
BstYI RGATCY 2 cut(s) 282, 1097
BstZ17I GTATAC 1 cut(s) 887
BsuRI GGCC 1 cut(s) 511
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 34, 115, 736
BtsI GCAGTG 1 cut(s) 975
BtsIMutI CAGTG 3 cut(s) 543, 975, 1038
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 1 cut(s) 591
CaiI CAGNNNCTG 3 cut(s) 707, 926, 974
CfoI GCGC 1 cut(s) 1114
Cfr13I GGNCC 2 cut(s) 89, 509
Csp6I GTAC 4 cut(s) 68, 187, 397, 915
CviAII CATG 6 cut(s) 21, 47, 379, 659, 859, 1019
CviQI GTAC 4 cut(s) 68, 187, 397, 915
DdeI CTNAG 4 cut(s) 768, 938, 1062, 1143
DpnI GATC 4 cut(s) 225, 284, 846, 1099
DpnII GATC 4 cut(s) 223, 282, 844, 1097
DraI TTTAAA 1 cut(s) 613
DriI GACNNNNNGTC 1 cut(s) 1057
Eam1104I CTCTTC 1 cut(s) 696
Eam1105I GACNNNNNGTC 1 cut(s) 1057
EarI CTCTTC 1 cut(s) 696
Eco130I CCWWGG 3 cut(s) 20, 512, 791
Eco32I GATATC 1 cut(s) 455
Eco47I GGWCC 1 cut(s) 89
Eco47III AGCGCT 1 cut(s) 1113
Eco57I CTGAAG 2 cut(s) 402, 567
Eco88I CYCGRG 3 cut(s) 315, 441, 762
Eco91I GGTNACC 1 cut(s) 1041
EcoO109I RGGNCCY 1 cut(s) 89
EcoO65I GGTNACC 1 cut(s) 1041
EcoRII CCWGG 2 cut(s) 78, 663
EcoRV GATATC 1 cut(s) 455
EcoT14I CCWWGG 3 cut(s) 20, 512, 791
ErhI CCWWGG 3 cut(s) 20, 512, 791
FaeI CATG 6 cut(s) 24, 50, 382, 662, 862, 1022
FalI AAGNNNNNCTT 4 cut(s) 160, 192, 1098, 1130
FaqI GGGAC 1 cut(s) 75
FatI CATG 6 cut(s) 20, 46, 378, 658, 858, 1018
FauNDI CATATG 1 cut(s) 757
FbaI TGATCA 1 cut(s) 844
FblI GTMKAC 1 cut(s) 886
Fnu4HI GCNGC 4 cut(s) 204, 637, 975, 1110
FokI GGATG 3 cut(s) 41, 102, 743
Fsp4HI GCNGC 4 cut(s) 204, 637, 975, 1110
FspBI CTAG 3 cut(s) 479, 534, 890
GlaI GCGC 1 cut(s) 1113
GluI GCNGC 4 cut(s) 204, 637, 975, 1110
GsuI CTGGAG 2 cut(s) 686, 1020
HaeII RGCGCY 1 cut(s) 1115
HaeIII GGCC 1 cut(s) 511
HhaI GCGC 1 cut(s) 1114
Hin1I GRCGYC 1 cut(s) 475
Hin1II CATG 6 cut(s) 24, 50, 382, 662, 862, 1022
Hin6I GCGC 1 cut(s) 1112
HinP1I GCGC 1 cut(s) 1112
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 4 cut(s) 324, 710, 862, 1058
HpaI GTTAAC 1 cut(s) 52
HphI GGTGA 4 cut(s) 50, 174, 262, 1035
Hpy166II GTNNAC 6 cut(s) 52, 399, 887, 915, 917, 1036
Hpy188I TCNGA 6 cut(s) 14, 110, 421, 464, 709, 853
Hpy188III TCNNGA 2 cut(s) 443, 1142
Hpy8I GTNNAC 6 cut(s) 52, 399, 887, 915, 917, 1036
HpyAV CCTTC 6 cut(s) 129, 422, 426, 548, 731, 890
HpyCH4III ACNGT 2 cut(s) 186, 703
HpyCH4IV ACGT 1 cut(s) 475
HpyCH4V TGCA 6 cut(s) 152, 578, 593, 653, 658, 968
HpyF10VI GCNNNNNNNGC 3 cut(s) 686, 974, 980
HpyF3I CTNAG 4 cut(s) 768, 938, 1062, 1143
HpySE526I ACGT 1 cut(s) 475
Hsp92I GRCGYC 1 cut(s) 475
Hsp92II CATG 6 cut(s) 24, 50, 382, 662, 862, 1022
HspAI GCGC 1 cut(s) 1112
KflI GGGWCCC 1 cut(s) 89
Ksp22I TGATCA 1 cut(s) 844
KspAI GTTAAC 1 cut(s) 52
Kzo9I GATC 4 cut(s) 223, 282, 844, 1097
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 1 cut(s) 967
Lsp1109I GCAGC 3 cut(s) 215, 961, 1121
LweI GCATC 2 cut(s) 243, 844
MaeI CTAG 3 cut(s) 479, 534, 890
MaeII ACGT 1 cut(s) 475
MaeIII GTNAC 4 cut(s) 180, 310, 697, 1041
MalI GATC 4 cut(s) 225, 284, 846, 1099
MboI GATC 4 cut(s) 223, 282, 844, 1097
MboII GAAGA 3 cut(s) 333, 683, 746
MflI RGATCY 2 cut(s) 282, 1097
MhlI GDGCHC 1 cut(s) 691
MluCI AATT 8 cut(s) 71, 192, 840, 871, 957, 1004, 1010, 1027
MlyI GAGTC 1 cut(s) 1067
MmeI TCCRAC 1 cut(s) 415
MnlI CCTC 7 cut(s) 29, 50, 191, 241, 311, 415, 916
MseI TTAA 7 cut(s) 51, 75, 167, 363, 389, 612, 1104
MspR9I CCNGG 2 cut(s) 80, 665
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 2 cut(s) 80, 665
MvnI CGCG 1 cut(s) 815
MwoI GCNNNNNNNGC 3 cut(s) 686, 974, 980
NcoI CCATGG 1 cut(s) 20
NdeI CATATG 1 cut(s) 757
NdeII GATC 4 cut(s) 223, 282, 844, 1097
NlaIII CATG 6 cut(s) 24, 50, 382, 662, 862, 1022
NlaIV GGNNCC 3 cut(s) 90, 91, 510
NmuCI GTSAC 2 cut(s) 180, 1041
NspI RCATGY 3 cut(s) 50, 382, 662
NspV TTCGAA 1 cut(s) 749
PaeR7I CTCGAG 2 cut(s) 315, 762
PaqCI CACCTGC 1 cut(s) 197
PciI ACATGT 2 cut(s) 46, 378
PciSI GCTCTTC 1 cut(s) 696
PctI GAATGC 1 cut(s) 178
PfeI GAWTC 3 cut(s) 324, 710, 862
PflMI CCANNNNNTGG 1 cut(s) 85
PfoI TCCNGGA 1 cut(s) 663
PkrI GCNGC 4 cut(s) 205, 638, 976, 1111
PleI GAGTC 1 cut(s) 1066
PpsI GAGTC 1 cut(s) 1066
PpuMI RGGWCCY 1 cut(s) 89
PscI ACATGT 2 cut(s) 46, 378
PshBI ATTAAT 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 89
Psp6I CCWGG 2 cut(s) 78, 663
PspEI GGTNACC 1 cut(s) 1041
PspGI CCWGG 2 cut(s) 78, 663
PspN4I GGNNCC 3 cut(s) 90, 91, 510
PspPI GGNCC 2 cut(s) 89, 509
PspPPI RGGWCCY 1 cut(s) 89
PspXI VCTCGAGB 2 cut(s) 315, 762
PsrI GAACNNNNNNTAC 1 cut(s) 32
PstI CTGCAG 1 cut(s) 970
PstNI CAGNNNCTG 3 cut(s) 707, 926, 974
PsuI RGATCY 2 cut(s) 282, 1097
RsaI GTAC 4 cut(s) 69, 188, 398, 916
RsaNI GTAC 4 cut(s) 68, 187, 397, 915
SapI GCTCTTC 1 cut(s) 696
SaqAI TTAA 7 cut(s) 51, 75, 167, 363, 389, 612, 1104
SatI GCNGC 4 cut(s) 204, 637, 975, 1110
Sau3AI GATC 4 cut(s) 223, 282, 844, 1097
Sau96I GGNCC 2 cut(s) 89, 509
SchI GAGTC 1 cut(s) 1067
ScrFI CCNGG 2 cut(s) 80, 665
SduI GDGCHC 1 cut(s) 691
SfaNI GCATC 2 cut(s) 243, 844
SfcI CTRYAG 3 cut(s) 94, 966, 1067
Sfr274I CTCGAG 2 cut(s) 315, 762
SfuI TTCGAA 1 cut(s) 749
SinI GGWCC 1 cut(s) 89
SlaI CTCGAG 2 cut(s) 315, 762
SmlI CTYRAG 3 cut(s) 130, 315, 762
SmoI CTYRAG 3 cut(s) 130, 315, 762
SpeI ACTAGT 1 cut(s) 889
Sse9I AATT 8 cut(s) 71, 192, 840, 871, 957, 1004, 1010, 1027
SsiI CCGC 2 cut(s) 636, 1046
SspMI CTAG 3 cut(s) 479, 534, 890
StyD4I CCNGG 2 cut(s) 78, 663
StyI CCWWGG 3 cut(s) 20, 512, 791
TaaI ACNGT 2 cut(s) 186, 703
TaiI ACGT 1 cut(s) 478
TaqI TCGA 3 cut(s) 316, 749, 763
TasI AATT 8 cut(s) 71, 192, 840, 871, 957, 1004, 1010, 1027
TatI WGTACW 2 cut(s) 396, 914
TauI GCSGC 1 cut(s) 639
TfiI GAWTC 3 cut(s) 324, 710, 862
Tru1I TTAA 7 cut(s) 51, 75, 167, 363, 389, 612, 1104
Tru9I TTAA 7 cut(s) 51, 75, 167, 363, 389, 612, 1104
TscAI CASTG 3 cut(s) 550, 975, 1038
TseFI GTSAC 2 cut(s) 180, 1041
TseI GCWGC 3 cut(s) 203, 974, 1109
Tsp45I GTSAC 2 cut(s) 180, 1041
TspDTI ATGAA 8 cut(s) 104, 290, 338, 747, 795, 813, 852, 875
TspRI CASTG 3 cut(s) 550, 975, 1038
Van91I CCANNNNNTGG 1 cut(s) 85
VpaK11BI GGWCC 1 cut(s) 89
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 1 cut(s) 1004
XceI RCATGY 3 cut(s) 50, 382, 662
XcmI CCANNNNNNNNNTGG 1 cut(s) 519
XhoI CTCGAG 2 cut(s) 315, 762
XmiI GTMKAC 1 cut(s) 886
XspI CTAG 3 cut(s) 479, 534, 890
ZraI GACGTC 1 cut(s) 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.