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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45100 |
| malus_domestica | MD09G1089500.v1.1 |
| prunus_persica | Prupe.3G235900_v2.0.a1 |
| rosa_laevigata | RLG00000021349 |
| rosa_multiflora | Rmu_sc0004206.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00087880 |
| rosa_rugosa | Rorug02G0498200 |
| rosa_samantha | Rh2AG564100 Rh2BG576700 Rh2CG546700 Rh2DG586500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 7 cut(s) | 46, 104, 107, 143, 224, 238, 391 |
| AcoI | YGGCCR | 1 cut(s) | 354 |
| AgsI | TTSAA | 3 cut(s) | 52, 218, 362 |
| AluBI | AGCT | 3 cut(s) | 301, 323, 365 |
| AluI | AGCT | 3 cut(s) | 301, 323, 365 |
| AoxI | GGCC | 1 cut(s) | 354 |
| ApeKI | GCWGC | 2 cut(s) | 235, 293 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 290, 322 |
| AspLEI | GCGC | 1 cut(s) | 132 |
| BalI | TGGCCA | 1 cut(s) | 356 |
| BbvI | GCAGC | 2 cut(s) | 247, 305 |
| BccI | CCATC | 1 cut(s) | 73 |
| BceAI | ACGGC | 2 cut(s) | 203, 237 |
| BfaI | CTAG | 3 cut(s) | 11, 162, 375 |
| BglII | AGATCT | 1 cut(s) | 335 |
| BisI | GCNGC | 4 cut(s) | 107, 144, 236, 294 |
| BlsI | GCNGC | 4 cut(s) | 108, 145, 237, 295 |
| Bsa29I | ATCGAT | 1 cut(s) | 116 |
| BseCI | ATCGAT | 1 cut(s) | 116 |
| BseGI | GGATG | 2 cut(s) | 76, 175 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BseXI | GCAGC | 2 cut(s) | 247, 305 |
| Bsh1285I | CGRYCG | 1 cut(s) | 242 |
| BshFI | GGCC | 1 cut(s) | 356 |
| BshVI | ATCGAT | 1 cut(s) | 116 |
| BsiEI | CGRYCG | 1 cut(s) | 242 |
| BsnI | GGCC | 1 cut(s) | 356 |
| Bsp143I | GATC | 2 cut(s) | 113, 335 |
| BspACI | CCGC | 7 cut(s) | 46, 104, 107, 143, 224, 238, 391 |
| BspANI | GGCC | 1 cut(s) | 356 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspDI | ATCGAT | 1 cut(s) | 116 |
| BssMI | GATC | 2 cut(s) | 113, 335 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 2 cut(s) | 44, 389 |
| BstDEI | CTNAG | 1 cut(s) | 38 |
| BstF5I | GGATG | 2 cut(s) | 76, 175 |
| BstHHI | GCGC | 1 cut(s) | 132 |
| BstKTI | GATC | 2 cut(s) | 116, 338 |
| BstMBI | GATC | 2 cut(s) | 113, 335 |
| BstMCI | CGRYCG | 1 cut(s) | 242 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 103, 187, 362 |
| BstV1I | GCAGC | 2 cut(s) | 247, 305 |
| BstX2I | RGATCY | 1 cut(s) | 335 |
| BstYI | RGATCY | 1 cut(s) | 335 |
| Bsu15I | ATCGAT | 1 cut(s) | 116 |
| BsuRI | GGCC | 1 cut(s) | 356 |
| BsuTUI | ATCGAT | 1 cut(s) | 116 |
| BtgZI | GCGATG | 1 cut(s) | 92 |
| BtsCI | GGATG | 2 cut(s) | 76, 175 |
| Cac8I | GCNNGC | 2 cut(s) | 44, 389 |
| CfoI | GCGC | 1 cut(s) | 132 |
| ClaI | ATCGAT | 1 cut(s) | 116 |
| CseI | GACGC | 1 cut(s) | 23 |
| CviJI | RGCY | 9 cut(s) | 14, 57, 64, 146, 176, 301, 323, 356, 365 |
| CviKI_1 | RGCY | 9 cut(s) | 14, 57, 64, 146, 176, 301, 323, 356, 365 |
| DdeI | CTNAG | 1 cut(s) | 38 |
| DpnI | GATC | 2 cut(s) | 115, 337 |
| DpnII | GATC | 2 cut(s) | 113, 335 |
| EaeI | YGGCCR | 1 cut(s) | 354 |
| EciI | GGCGGA | 1 cut(s) | 239 |
| FaiI | YATR | 1 cut(s) | 60 |
| FauI | CCCGC | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 4 cut(s) | 107, 144, 236, 294 |
| FokI | GGATG | 2 cut(s) | 83, 182 |
| Fsp4HI | GCNGC | 4 cut(s) | 107, 144, 236, 294 |
| FspBI | CTAG | 3 cut(s) | 11, 162, 375 |
| GlaI | GCGC | 1 cut(s) | 131 |
| GluI | GCNGC | 4 cut(s) | 107, 144, 236, 294 |
| HaeIII | GGCC | 1 cut(s) | 356 |
| HgaI | GACGC | 1 cut(s) | 23 |
| HhaI | GCGC | 1 cut(s) | 132 |
| Hin6I | GCGC | 1 cut(s) | 130 |
| HinP1I | GCGC | 1 cut(s) | 130 |
| HindIII | AAGCTT | 1 cut(s) | 363 |
| Hpy188I | TCNGA | 3 cut(s) | 39, 255, 335 |
| Hpy188III | TCNNGA | 1 cut(s) | 283 |
| Hpy99I | CGWCG | 1 cut(s) | 189 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpyCH4V | TGCA | 1 cut(s) | 97 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 103, 187, 362 |
| HpyF3I | CTNAG | 1 cut(s) | 38 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| HspAI | GCGC | 1 cut(s) | 130 |
| Kzo9I | GATC | 2 cut(s) | 113, 335 |
| LmnI | GCTCC | 2 cut(s) | 306, 320 |
| LpnPI | CCDG | 3 cut(s) | 28, 309, 317 |
| Lsp1109I | GCAGC | 2 cut(s) | 247, 305 |
| MaeI | CTAG | 3 cut(s) | 11, 162, 375 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MalI | GATC | 2 cut(s) | 115, 337 |
| MboI | GATC | 2 cut(s) | 113, 335 |
| MboII | GAAGA | 1 cut(s) | 268 |
| MflI | RGATCY | 1 cut(s) | 335 |
| MlsI | TGGCCA | 1 cut(s) | 356 |
| MluCI | AATT | 1 cut(s) | 343 |
| MluNI | TGGCCA | 1 cut(s) | 356 |
| MmeI | TCCRAC | 1 cut(s) | 233 |
| MnlI | CCTC | 3 cut(s) | 150, 160, 209 |
| Mox20I | TGGCCA | 1 cut(s) | 356 |
| MscI | TGGCCA | 1 cut(s) | 356 |
| MseI | TTAA | 2 cut(s) | 30, 126 |
| Msp20I | TGGCCA | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 1 cut(s) | 238 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 103, 187, 362 |
| NdeII | GATC | 2 cut(s) | 113, 335 |
| PkrI | GCNGC | 4 cut(s) | 108, 145, 237, 295 |
| PsuI | RGATCY | 1 cut(s) | 335 |
| SaqAI | TTAA | 2 cut(s) | 30, 126 |
| SatI | GCNGC | 4 cut(s) | 107, 144, 236, 294 |
| Sau3AI | GATC | 2 cut(s) | 113, 335 |
| SetI | ASST | 6 cut(s) | 96, 270, 282, 303, 325, 367 |
| Sse9I | AATT | 1 cut(s) | 343 |
| SsiI | CCGC | 7 cut(s) | 46, 104, 107, 143, 224, 238, 391 |
| SspMI | CTAG | 3 cut(s) | 11, 162, 375 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqI | TCGA | 1 cut(s) | 116 |
| TasI | AATT | 1 cut(s) | 343 |
| TauI | GCSGC | 2 cut(s) | 109, 146 |
| Tru1I | TTAA | 2 cut(s) | 30, 126 |
| Tru9I | TTAA | 2 cut(s) | 30, 126 |
| TseI | GCWGC | 2 cut(s) | 235, 293 |
| TspDTI | ATGAA | 4 cut(s) | 17, 87, 186, 275 |
| XspI | CTAG | 3 cut(s) | 11, 162, 375 |