Rh2CG186600

VAMP-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
17365895 .. 17367102
1208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG186600.1

Sequence Viewer

Length: 357 bp
ATGGCTGCCTTGAACAGTAATCTCCACAATATTGTCGCTGGACGGCGGAGAACCATCCCGGTCGCAGTCATGGGTCTTCGGGTCGACGATCTGGATAGATTGAGATGTGATTTCGAGAGGGATAATGGAACTGGGTCGGTCTGGGATGGTGGAGATTTCGCCTTCCATTGCTTTCAAGCTGAGTTTGATTCAATTATGAAGGAAGTAATGGTGTTGGATTTGGATTATTTGCCCACTTCGCCGCCTGCAAGTCGGGATAAAGGGAAGAGATTGGTTCTGGATTTGAAAATTTTGTTCTTCAGTGCAGGTGAGACCGTGAGAGAGAGAGCTTTGCCAAAAAACAAAAAATGCAGGTGA

Protein Analysis

118

Amino Acids

13.33

Weight (kDa)

8.53

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019512)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 296, 342
Acc36I ACCTGC 2 cut(s) 296, 342
AccI GTMKAC 1 cut(s) 84
AciI CCGC 2 cut(s) 46, 242
AcsI RAATTY 1 cut(s) 288
AcuI CTGAAG 1 cut(s) 283
AgsI TTSAA 4 cut(s) 13, 176, 192, 286
AluBI AGCT 2 cut(s) 179, 329
AluI AGCT 2 cut(s) 179, 329
Alw26I GTCTC 1 cut(s) 305
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 288
AsuC2I CCSGG 1 cut(s) 59
AsuHPI GGTGA 1 cut(s) 320
BbsI GAAGAC 1 cut(s) 68
BccI CCATC 2 cut(s) 62, 140
BceAI ACGGC 1 cut(s) 59
BcnI CCSGG 1 cut(s) 59
BcoDI GTCTC 1 cut(s) 305
BfuAI ACCTGC 2 cut(s) 296, 342
BisI GCNGC 2 cut(s) 6, 242
BlsI GCNGC 2 cut(s) 7, 243
Bme1390I CCNGG 1 cut(s) 59
BmrFI CCNGG 1 cut(s) 59
BmrI ACTGGG 1 cut(s) 141
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 1 cut(s) 68
BpuMI CCSGG 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 305
Bse1I ACTGG 1 cut(s) 136
Bse3DI GCAATG 1 cut(s) 166
BseGI GGATG 2 cut(s) 54, 151
BseMI GCAATG 1 cut(s) 166
BseMII CTCAG 1 cut(s) 171
BseNI ACTGG 1 cut(s) 136
BsgI GTGCAG 1 cut(s) 324
Bsh1285I CGRYCG 1 cut(s) 63
BsiEI CGRYCG 1 cut(s) 63
BsiSI CCGG 1 cut(s) 59
BsmAI GTCTC 1 cut(s) 305
Bso31I GGTCTC 1 cut(s) 305
Bsp143I GATC 1 cut(s) 88
BspACI CCGC 2 cut(s) 46, 242
BspCNI CTCAG 1 cut(s) 172
BspMI ACCTGC 2 cut(s) 296, 342
BspTNI GGTCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 166
BsrI ACTGG 1 cut(s) 136
BssMI GATC 1 cut(s) 88
Bst4CI ACNGT 2 cut(s) 17, 316
Bst6I CTCTTC 1 cut(s) 260
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 1 cut(s) 180
BstF5I GGATG 2 cut(s) 54, 151
BstKTI GATC 1 cut(s) 91
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 1 cut(s) 88
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 1 cut(s) 238
BstSCI CCNGG 1 cut(s) 57
BstV2I GAAGAC 1 cut(s) 68
BtsCI GGATG 2 cut(s) 54, 151
BtsIMutI CAGTG 1 cut(s) 307
BveI ACCTGC 2 cut(s) 296, 342
Cac8I GCNNGC 1 cut(s) 246
CviAII CATG 1 cut(s) 70
CviJI RGCY 3 cut(s) 5, 179, 329
CviKI_1 RGCY 3 cut(s) 5, 179, 329
DdeI CTNAG 1 cut(s) 180
DpnI GATC 1 cut(s) 90
DpnII GATC 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 260
EarI CTCTTC 1 cut(s) 260
EciI GGCGGA 1 cut(s) 61
Eco31I GGTCTC 1 cut(s) 305
Eco57I CTGAAG 1 cut(s) 283
FaeI CATG 1 cut(s) 73
FaiI YATR 2 cut(s) 71, 197
FatI CATG 1 cut(s) 69
FblI GTMKAC 1 cut(s) 84
Fnu4HI GCNGC 2 cut(s) 6, 242
FokI GGATG 2 cut(s) 41, 158
Fsp4HI GCNGC 2 cut(s) 6, 242
GluI GCNGC 2 cut(s) 6, 242
HapII CCGG 1 cut(s) 59
Hin1II CATG 1 cut(s) 73
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HinfI GANTC 1 cut(s) 188
HpaII CCGG 1 cut(s) 59
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 1 cut(s) 85
Hpy188III TCNNGA 4 cut(s) 92, 115, 254, 278
Hpy8I GTNNAC 1 cut(s) 85
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 2 cut(s) 172, 193
HpyCH4III ACNGT 2 cut(s) 17, 316
HpyCH4V TGCA 3 cut(s) 248, 305, 351
HpyF10VI GCNNNNNNNGC 1 cut(s) 238
HpyF3I CTNAG 1 cut(s) 180
Hsp92II CATG 1 cut(s) 73
Kzo9I GATC 1 cut(s) 88
LpnPI CCDG 9 cut(s) 24, 72, 77, 117, 127, 258, 263, 291, 337
MalI GATC 1 cut(s) 90
MboI GATC 1 cut(s) 88
MboII GAAGA 3 cut(s) 68, 277, 289
MluCI AATT 2 cut(s) 192, 288
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 1 cut(s) 111
MspI CCGG 1 cut(s) 59
MspR9I CCNGG 1 cut(s) 59
MwoI GCNNNNNNNGC 1 cut(s) 238
NciI CCSGG 1 cut(s) 59
NdeII GATC 1 cut(s) 88
NlaIII CATG 1 cut(s) 73
PaqCI CACCTGC 2 cut(s) 296, 342
PfeI GAWTC 1 cut(s) 188
PkrI GCNGC 2 cut(s) 7, 243
SalI GTCGAC 1 cut(s) 83
SatI GCNGC 2 cut(s) 6, 242
Sau3AI GATC 1 cut(s) 88
ScrFI CCNGG 1 cut(s) 59
SetI ASST 4 cut(s) 181, 310, 331, 356
Sse9I AATT 2 cut(s) 192, 288
SsiI CCGC 2 cut(s) 46, 242
SspI AATATT 1 cut(s) 31
StyD4I CCNGG 1 cut(s) 57
TaaI ACNGT 2 cut(s) 17, 316
TaqI TCGA 2 cut(s) 84, 114
TaqII GACCGA 1 cut(s) 127
TasI AATT 2 cut(s) 192, 288
TauI GCSGC 1 cut(s) 244
TfiI GAWTC 1 cut(s) 188
TscAI CASTG 1 cut(s) 307
TseI GCWGC 1 cut(s) 5
TspDTI ATGAA 1 cut(s) 212
TspRI CASTG 1 cut(s) 307
XapI RAATTY 1 cut(s) 288
XmiI GTMKAC 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.