Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004955

Physical Location & Seq

Genomic Coordinates Forward (+)

1707676 .. 1711503

Gene Structure 3828 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG028200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGGTTGTGAATGTTTTGCAGTAAGGATGAAGGGTTTTAGAGATTGGATTCTTTCTCAGTTAGTAGCCAAGTCTGTGGTTTTGTCTCGGCCGTTATCAGGCGGTGATAGTTTCTTTAGTGCGGAACGTTCGACTAATGAAGTGATTACTGACCAAGGTGCTTCTGATTCTACCACTTTGGTAGCACCGCCCGTCCTTGATGAAACTTCCAACTCGTTGAATAGGGATCAGGAAAATCAGTCTAGTCCTTCCCCGCAGGATGTTGAGGTTGAAAATTCTGATCAATCTCATAGTGGGTCTGATATGAGAAAGAAGGATCCTTTGGTGAAAATTGATGATCTACAAGCCAAGTTCTTGCAACTCCTCCGGCAGCTTGGTCTATCAAAAGACAACCTCATGGTGGCAAAGGTTCTTTATCGAATTCACCTTGCAACTGTGATACGAGCAGAAAAGTCGGATTTGAAAGGAGCTAATCTCGGAGGTGATGGAAACAGAGTGATGACAGCAGAACAAGCTGGCCCGCCTGATTTGGATTTTTCTCTGAGAATCCTTGTCCTTGGGAAAACAGGAGTGGGCAAGAGTGCTACAATTAATTCTATATTTGATCAAACAAAAGCGGTAACCAATGCTTTTCGACCCGGTACAAAGCACATTCGGGAGGTTGTGGGAACTGTAAATGGGATTAGAGTAACTGTCATTGATACCCCTGGTTTTTTGCCTGGGGTATGTACAGGTAACTTGCGCAGAAATAAGAAGATTATGCTCTCAGTGAAGAGATTTATTAGAAAAAGTCCACCTGACATTGTTTTGTTTTTCGAACGCCTTGATCTCATTGATACAAGCTATAGTGATCTTCCGCTTTTGAAGCTAATAACTGAAGTTTTTGGGCGTGCAATTTGGTTTAGCACCATTCTTGTTATGACTCATTCTTCCTCAGCTCTTCCGGATGGACCAGACGGGTACCCTGTCAGCTATGAAGTACATGCGAGGCGAAGCACGGATATGGTGCAGCACTATATACATCAGGCAGTGTCGGACTCCAGACTTGAAAACCCAGTGCTTTTGGTTGAGAATCATTCTCATTGCAAGACAAATATCATGGGGGAAAAGATACTTCCAAATGGTCAGGTTTGGAAATCTCAGTTTTTGTTACTATGCATTTGTACAAAAGTTCTAGGTGATGTTAATTCCCTCTTGAAATTTAACGACAGCATTGAACTGGGACCCCCAGCTGCTACCTATGTGCCGTCTCTTCCCCATCTCCTTTCATCTCTTCTACGCCATCCTATTGTTCCAAGTGGAGTGGAAAATGATGTTGATGAGAGCTTGTTTTCAGACATGGAGGAAGAAGATGAGTATGATCAATTACCTGCAATCCGAATCCTGACAAAAGCCCAGTTTGAGAGGCTGACAAAATCACAGAAAACAGACTATCTCAATGAATTGGATTATCGGGAGACCCTTTATCTGAAGAAACAGTTGAAAGAAGAGTACCGTAGGCAGATGGAAAGTAGGCTTTCCAATGAAAAAAATTCAGCAAGTGATGATAACTCTGAGAGTCAGCAGGCTGCCCCAGAGGAGGCTATTTTATTACCAGATATGGAGATCCCTCTGAGTTTTGGCTCTAATCACCCTGCACACAGATATCGTTGCCTTGTTGCGAGTGATCAGTGGATTGTGAGACCTGTTCTTGATCCCCAGGGATGGGATAATGATGTGGGCTTCGATGGAGTAAGCTTGGAATCAGCTGCACATATAAATAGGGAACTCTTTACCTCTGTTGTGGGGCAGATAAGCAAGGACAAACAAGATTTTAGCATTCAGTCAGAGTGCGCTGCAGCTTACACAAATTCCAGGGGAACTGTACATTCTGTAGGTCTTGATGTTCAATCTGCCGGTAAAGATACCATCTATACTTTTCACAGCAACAAGAAGCGAGCAAATCAGAAGAAGCTGTGGGAGGATGTTTTTGATGGTGGAGTCTCTTTGACATCTTTTGGGAACAAGTATTACTTTGGTGCCAAGCTTGAAGAAACTGTTTCAATTGGGAAGAGGTTGAAGTTTCTGATGAACGCAGGCCAAATGATGAATGCAAGCAAATTGATTGTGGATCGTGAACAAGTCGCATATGGTGGCTCTGTGGAAGCTACTTTACGGGGTAGAGACTACCCTGTGAGAAATGACTTTGTCACCCTGACAATGTCTATCCTTTCTTTCAATAAAGAGATGGTGTTGGGTGGAAACGTACGGTCTGAGTCCCGGCTGGGCAGAAATTTGAAGGTATCGGTCAATGCTAATCTAAATAGCCGCAGGATGGGGAAGTTGAGCGTAAAGACAAGCAGCAGTGATCATTTGCCGTTTGGTCTAGTTGCCGCTTTCACAATTTTCTGGACCCTCTTACGGAGAAAGGGCATCGCAAATTCAAGTAATGAATTAGGGGAGGCTGAATCAGGGGAGACTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0015031 GO:0015833 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0045036 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

821

Amino Acids

91.1

Weight (kDa)

6.33

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIG1	PF04548	181 - 314	8.4e-19	AIG1 family
MMR_HSR1	PF01926	182 - 271	5.8e-09	50S ribosome-binding GTPase
TOC159_MAD	PF11886	527 - 802	2.3e-101	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20300 AT5G20300 AT5G20300 AT5G20300 AT5G20300
fragaria_vesca	FvH4_1g02420 FvH4_1g02420 FvH4_1g02420 FvH4_1g02420 FvH4_1g02420 FvH4_1g02420 FvH4_1g02420 FvH4_1g02420
malus_domestica	MD02G1020900.v1.1 MD15G1164100.v1.1
prunus_persica	Prupe.7G250500_v2.0.a1 Prupe.7G250500_v2.0.a1
pyrus_communis	pycom02g01840 pycom15g14720
rosa_chinensis	RchiOBHm_Chr2g0087381
rosa_laevigata	RLG00000015861
rosa_multiflora	Rmu_sc0012811.1_g000001
rosa_roxburghii	Rroxscaffold_2G00153590
rosa_rugosa	Rorug01G0474600 Rorug01G0474700
rosa_samantha	Rh2AG028200 Rh2BG028100 Rh2CG028400 Rh2DG028200
rosa_wichuraiana	Rw2G002240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	743
Acc36I	ACCTGC	1 cut(s)	1378
Acc65I	GGTACC	1 cut(s)	960
AccB1I	GGYRCC	2 cut(s)	960, 2018
AccIII	TCCGGA	1 cut(s)	943
AciI	CCGC	9 cut(s)	102, 122, 188, 254, 521, 617, 857, 2308, 2373
AclI	AACGTT	1 cut(s)	127
AclWI	GGATC	6 cut(s)	234, 311, 324, 1600, 1688, 2118
AcoI	YGGCCR	1 cut(s)	89
AcsI	RAATTY	7 cut(s)	274, 420, 1199, 1531, 1849, 2272, 2419
AcuI	CTGAAG	2 cut(s)	897, 1490
AfaI	GTAC	8 cut(s)	643, 730, 962, 981, 1165, 1493, 1866, 2247
AfiI	CCNNNNNNNGG	7 cut(s)	98, 400, 1579, 1704, 1705, 2314, 2400
AjnI	CCWGG	4 cut(s)	706, 718, 1698, 1853
AjuI	GAANNNNNNNTTGG	2 cut(s)	305, 337
Alw26I	GTCTC	7 cut(s)	90, 1254, 1451, 1675, 1987, 2157, 2450
AlwI	GGATC	6 cut(s)	234, 311, 324, 1600, 1688, 2118
Aor13HI	TCCGGA	1 cut(s)	943
AoxI	GGCC	3 cut(s)	89, 517, 2077
ApeKI	GCWGC	8 cut(s)	370, 1009, 1232, 1568, 1748, 1835, 1838, 2340
ApoI	RAATTY	7 cut(s)	274, 420, 1199, 1531, 1849, 2272, 2419
AseI	ATTAAT	1 cut(s)	591
Asp718I	GGTACC	1 cut(s)	960
AspLEI	GCGC	2 cut(s)	744, 1835
AspS9I	GGNCC	4 cut(s)	518, 950, 1223, 2391
AsuC2I	CCSGG	2 cut(s)	639, 2260
AsuHPI	GGTGA	7 cut(s)	116, 337, 416, 494, 1190, 1622, 2182
AsuII	TTCGAA	1 cut(s)	816
AvaII	GGWCC	3 cut(s)	950, 1223, 2391
BamHI	GGATCC	1 cut(s)	316
BanI	GGYRCC	2 cut(s)	960, 2018
BarI	GAAGNNNNNNTAC	2 cut(s)	2136, 2168
BbvCI	CCTCAGC	1 cut(s)	934
BbvI	GCAGC	8 cut(s)	382, 1021, 1219, 1555, 1735, 1822, 1850, 2352
BceAI	ACGGC	3 cut(s)	76, 1231, 2341
BcgI	CGANNNNNNTGC	2 cut(s)	435, 469
BciT130I	CCWGG	4 cut(s)	708, 720, 1700, 1855
BclI	TGATCA	5 cut(s)	280, 604, 1360, 1666, 2347
BcnI	CCSGG	2 cut(s)	639, 2260
BcoDI	GTCTC	7 cut(s)	90, 1254, 1451, 1675, 1987, 2157, 2450
BfaI	CTAG	3 cut(s)	243, 1175, 2366
BfmI	CTRYAG	3 cut(s)	844, 1836, 1872
BfuAI	ACCTGC	1 cut(s)	1378
Bme1390I	CCNGG	6 cut(s)	639, 708, 720, 1700, 1855, 2260
Bme18I	GGWCC	3 cut(s)	950, 1223, 2391
BmgT120I	GGNCC	4 cut(s)	518, 950, 1223, 2391
BmiI	GGNNCC	6 cut(s)	318, 962, 1224, 1225, 2020, 2393
BmrFI	CCNGG	6 cut(s)	639, 708, 720, 1700, 1855, 2260
BmrI	ACTGGG	3 cut(s)	1049, 1229, 1390
BmsI	GCATC	1 cut(s)	2421
BmuI	ACTGGG	3 cut(s)	1049, 1229, 1390
BplI	GAGNNNNNCTC	2 cut(s)	459, 491
BpmI	CTGGAG	1 cut(s)	1024
Bpu10I	CCTNAGC	1 cut(s)	934
Bpu14I	TTCGAA	1 cut(s)	816
BpuMI	CCSGG	2 cut(s)	639, 2260
BsaI	GGTCTC	2 cut(s)	1451, 1675
BsaJI	CCNNGG	7 cut(s)	154, 556, 706, 719, 1698, 1699, 1854
BsaWI	WCCGGW	1 cut(s)	943
Bsc4I	CCNNNNNNNGG	7 cut(s)	98, 400, 1579, 1704, 1705, 2314, 2400
Bse118I	RCCGGY	1 cut(s)	1895
Bse1I	ACTGG	4 cut(s)	1055, 1224, 1396, 2464
Bse3DI	GCAATG	1 cut(s)	1081
BseAI	TCCGGA	1 cut(s)	943
BseBI	CCWGG	4 cut(s)	708, 720, 1700, 1855
BseDI	CCNNGG	7 cut(s)	154, 556, 706, 719, 1698, 1699, 1854
BseGI	GGATG	7 cut(s)	33, 265, 952, 1282, 1709, 1969, 2319
BseLI	CCNNNNNNNGG	7 cut(s)	98, 400, 1579, 1704, 1705, 2314, 2400
BseMI	GCAATG	1 cut(s)	1081
BseMII	CTCAG	8 cut(s)	71, 533, 780, 948, 1154, 1545, 1604, 2244
BseNI	ACTGG	4 cut(s)	1055, 1224, 1396, 2464
BseRI	GAGGAG	2 cut(s)	353, 1592
BseX3I	CGGCCG	1 cut(s)	89
BseXI	GCAGC	8 cut(s)	382, 1021, 1219, 1555, 1735, 1822, 1850, 2352
BseYI	CCCAGC	2 cut(s)	1228, 2263
BsgI	GTGCAG	3 cut(s)	1028, 1620, 1734
Bsh1285I	CGRYCG	1 cut(s)	92
BshFI	GGCC	3 cut(s)	91, 519, 2079
BshNI	GGYRCC	2 cut(s)	960, 2018
BsiEI	CGRYCG	1 cut(s)	92
BsiSI	CCGG	5 cut(s)	367, 639, 944, 1896, 2260
BsiWI	CGTACG	1 cut(s)	2245
BslFI	GGGAC	2 cut(s)	1236, 2242
BslI	CCNNNNNNNGG	7 cut(s)	98, 400, 1579, 1704, 1705, 2314, 2400
BsmAI	GTCTC	7 cut(s)	90, 1254, 1451, 1675, 1987, 2157, 2450
BsmBI	CGTCTC	1 cut(s)	1254
BsmFI	GGGAC	2 cut(s)	1236, 2242
BsmI	GAATGC	2 cut(s)	1818, 2095
BsnI	GGCC	3 cut(s)	91, 519, 2079
Bso31I	GGTCTC	2 cut(s)	1451, 1675
Bsp119I	TTCGAA	1 cut(s)	816
Bsp13I	TCCGGA	1 cut(s)	943
Bsp1407I	TGTACA	3 cut(s)	728, 1163, 1864
BspACI	CCGC	9 cut(s)	102, 122, 188, 254, 521, 617, 857, 2308, 2373
BspANI	GGCC	3 cut(s)	91, 519, 2079
BspCNI	CTCAG	8 cut(s)	70, 534, 779, 947, 1153, 1546, 1605, 2245
BspEI	TCCGGA	1 cut(s)	943
BspLI	GGNNCC	6 cut(s)	318, 962, 1224, 1225, 2020, 2393
BspMAI	CTGCAG	1 cut(s)	1840
BspMI	ACCTGC	1 cut(s)	1378
BspPI	GGATC	6 cut(s)	234, 311, 324, 1600, 1688, 2118
BspQI	GCTCTTC	1 cut(s)	945
BspT104I	TTCGAA	1 cut(s)	816
BspT107I	GGYRCC	2 cut(s)	960, 2018
BspTNI	GGTCTC	2 cut(s)	1451, 1675
BsrDI	GCAATG	1 cut(s)	1081
BsrFI	RCCGGY	1 cut(s)	1895
BsrGI	TGTACA	3 cut(s)	728, 1163, 1864
BsrI	ACTGG	4 cut(s)	1055, 1224, 1396, 2464
BssAI	RCCGGY	1 cut(s)	1895
BssECI	CCNNGG	7 cut(s)	154, 556, 706, 719, 1698, 1699, 1854
BssT1I	CCWWGG	2 cut(s)	154, 556
Bst2UI	CCWGG	4 cut(s)	708, 720, 1700, 1855
Bst4CI	ACNGT	8 cut(s)	436, 673, 694, 1479, 1496, 1864, 2038, 2250
Bst6I	CTCTTC	6 cut(s)	767, 945, 1257, 1278, 1482, 2045
BstAUI	TGTACA	3 cut(s)	728, 1163, 1864
BstBI	TTCGAA	1 cut(s)	816
BstC8I	GCNNGC	7 cut(s)	517, 521, 891, 1566, 1938, 2077, 2095
BstDEI	CTNAG	8 cut(s)	57, 542, 766, 934, 1140, 1554, 1613, 2253
BstEII	GGTNACC	1 cut(s)	619
BstF5I	GGATG	7 cut(s)	33, 265, 952, 1282, 1709, 1969, 2319
BstHHI	GCGC	2 cut(s)	744, 1835
BstMAI	GTCTC	7 cut(s)	90, 1254, 1451, 1675, 1987, 2157, 2450
BstMCI	CGRYCG	1 cut(s)	92
BstMWI	GCNNNNNNNGC	2 cut(s)	512, 865
BstNI	CCWGG	4 cut(s)	708, 720, 1700, 1855
BstNSI	RCATGY	1 cut(s)	986
BstPI	GGTNACC	1 cut(s)	619
BstSCI	CCNGG	6 cut(s)	637, 706, 718, 1698, 1853, 2258
BstSFI	CTRYAG	3 cut(s)	844, 1836, 1872
BstV1I	GCAGC	8 cut(s)	382, 1021, 1219, 1555, 1735, 1822, 1850, 2352
BstX2I	RGATCY	2 cut(s)	316, 1605
BstXI	CCANNNNNNTGG	1 cut(s)	76
BstYI	RGATCY	2 cut(s)	316, 1605
BstZI	CGGCCG	1 cut(s)	89
BsuRI	GGCC	3 cut(s)	91, 519, 2079
BtgZI	GCGATG	1 cut(s)	2398
BtsCI	GGATG	7 cut(s)	33, 265, 952, 1282, 1709, 1969, 2319
BtsI	GCAGTG	2 cut(s)	1035, 2350
BtsIMutI	CAGTG	5 cut(s)	774, 1035, 1062, 1676, 2350
BveI	ACCTGC	1 cut(s)	1378
Cac8I	GCNNGC	7 cut(s)	517, 521, 891, 1566, 1938, 2077, 2095
CfoI	GCGC	2 cut(s)	744, 1835
Cfr10I	RCCGGY	1 cut(s)	1895
Cfr13I	GGNCC	4 cut(s)	518, 950, 1223, 2391
Csp6I	GTAC	8 cut(s)	642, 729, 961, 980, 1164, 1492, 1865, 2246
CspCI	CAANNNNNGTGG	2 cut(s)	1284, 1319
CviAII	CATG	4 cut(s)	397, 983, 1099, 1339
CviQI	GTAC	8 cut(s)	642, 729, 961, 980, 1164, 1492, 1865, 2246
DdeI	CTNAG	8 cut(s)	57, 542, 766, 934, 1140, 1554, 1613, 2253
EaeI	YGGCCR	1 cut(s)	89
EagI	CGGCCG	1 cut(s)	89
Eam1104I	CTCTTC	6 cut(s)	767, 945, 1257, 1278, 1482, 2045
EarI	CTCTTC	6 cut(s)	767, 945, 1257, 1278, 1482, 2045
EclXI	CGGCCG	1 cut(s)	89
Eco130I	CCWWGG	2 cut(s)	154, 556
Eco31I	GGTCTC	2 cut(s)	1451, 1675
Eco32I	GATATC	1 cut(s)	1646
Eco47I	GGWCC	3 cut(s)	950, 1223, 2391
Eco52I	CGGCCG	1 cut(s)	89
Eco57I	CTGAAG	2 cut(s)	897, 1490
Eco91I	GGTNACC	1 cut(s)	619
EcoO109I	RGGNCCY	1 cut(s)	1223
EcoO65I	GGTNACC	1 cut(s)	619
EcoRI	GAATTC	1 cut(s)	420
EcoRII	CCWGG	4 cut(s)	706, 718, 1698, 1853
EcoRV	GATATC	1 cut(s)	1646
EcoT14I	CCWWGG	2 cut(s)	154, 556
EcoT22I	ATGCAT	1 cut(s)	1160
ErhI	CCWWGG	2 cut(s)	154, 556
Esp3I	CGTCTC	1 cut(s)	1254
FaeI	CATG	4 cut(s)	400, 986, 1102, 1342
FalI	AAGNNNNNCTT	2 cut(s)	1997, 2029
FaqI	GGGAC	2 cut(s)	1236, 2242
FatI	CATG	4 cut(s)	396, 982, 1098, 1338
FauI	CCCGC	2 cut(s)	261, 528
FauNDI	CATATG	1 cut(s)	2128
FbaI	TGATCA	5 cut(s)	280, 604, 1360, 1666, 2347
FokI	GGATG	7 cut(s)	40, 272, 959, 1269, 1716, 1976, 2326
FspBI	CTAG	3 cut(s)	243, 1175, 2366
FspI	TGCGCA	1 cut(s)	743
GlaI	GCGC	2 cut(s)	743, 1834
GsaI	CCCAGC	2 cut(s)	1232, 2267
GsuI	CTGGAG	1 cut(s)	1024
HaeIII	GGCC	3 cut(s)	91, 519, 2079
HapII	CCGG	5 cut(s)	367, 639, 944, 1896, 2260
HhaI	GCGC	2 cut(s)	744, 1835
Hin1II	CATG	4 cut(s)	400, 986, 1102, 1342
Hin6I	GCGC	2 cut(s)	742, 1833
HinP1I	GCGC	2 cut(s)	742, 1833
HindIII	AAGCTT	2 cut(s)	1735, 2024
HpaII	CCGG	5 cut(s)	367, 639, 944, 1896, 2260
HphI	GGTGA	7 cut(s)	116, 337, 416, 494, 1190, 1622, 2182
Hpy166II	GTNNAC	2 cut(s)	794, 2117
Hpy8I	GTNNAC	2 cut(s)	794, 2117
HpyAV	CCTTC	4 cut(s)	25, 258, 307, 2272
HpyCH4III	ACNGT	8 cut(s)	436, 673, 694, 1479, 1496, 1864, 2038, 2250
HpyCH4IV	ACGT	2 cut(s)	127, 2244
HpyF10VI	GCNNNNNNNGC	2 cut(s)	512, 865
HpyF3I	CTNAG	8 cut(s)	57, 542, 766, 934, 1140, 1554, 1613, 2253
HpySE526I	ACGT	2 cut(s)	127, 2244
Hsp92II	CATG	4 cut(s)	400, 986, 1102, 1342
HspAI	GCGC	2 cut(s)	742, 1833
KflI	GGGWCCC	1 cut(s)	1223
Kpn2I	TCCGGA	1 cut(s)	943
KpnI	GGTACC	1 cut(s)	964
Ksp22I	TGATCA	5 cut(s)	280, 604, 1360, 1666, 2347
LguI	GCTCTTC	1 cut(s)	945
LmnI	GCTCC	1 cut(s)	467
Lsp1109I	GCAGC	8 cut(s)	382, 1021, 1219, 1555, 1735, 1822, 1850, 2352
LweI	GCATC	1 cut(s)	2421
MaeI	CTAG	3 cut(s)	243, 1175, 2366
MaeII	ACGT	2 cut(s)	127, 2244
MaeIII	GTNAC	5 cut(s)	619, 688, 734, 1149, 2188
MfeI	CAATTG	1 cut(s)	2043
MflI	RGATCY	2 cut(s)	316, 1605
MlyI	GAGTC	5 cut(s)	916, 1031, 1567, 1989, 2264
MmeI	TCCRAC	3 cut(s)	234, 435, 1014
Mph1103I	ATGCAT	1 cut(s)	1160
MroI	TCCGGA	1 cut(s)	943
MseI	TTAA	3 cut(s)	591, 1185, 1203
MslI	CAYNNNNRTG	1 cut(s)	1001
MspA1I	CMGCKG	2 cut(s)	1232, 1748
MspI	CCGG	5 cut(s)	367, 639, 944, 1896, 2260
MspR9I	CCNGG	6 cut(s)	639, 708, 720, 1700, 1855, 2260
MunI	CAATTG	1 cut(s)	2043
Mva1269I	GAATGC	2 cut(s)	1818, 2095
MvaI	CCWGG	4 cut(s)	708, 720, 1700, 1855
MwoI	GCNNNNNNNGC	2 cut(s)	512, 865
NciI	CCSGG	2 cut(s)	639, 2260
NdeI	CATATG	1 cut(s)	2128
NlaIII	CATG	4 cut(s)	400, 986, 1102, 1342
NlaIV	GGNNCC	6 cut(s)	318, 962, 1224, 1225, 2020, 2393
NmeAIII	GCCGAG	1 cut(s)	67
NmuCI	GTSAC	1 cut(s)	2188
NsbI	TGCGCA	1 cut(s)	743
NsiI	ATGCAT	1 cut(s)	1160
NspI	RCATGY	1 cut(s)	986
NspV	TTCGAA	1 cut(s)	816
PasI	CCCWGGG	1 cut(s)	1699
PciSI	GCTCTTC	1 cut(s)	945
PctI	GAATGC	2 cut(s)	1818, 2095
PfeI	GAWTC	7 cut(s)	49, 167, 546, 1072, 1380, 1742, 2447
Pfl23II	CGTACG	1 cut(s)	2245
PflFI	GACNNNGTC	2 cut(s)	2186, 2200
PleI	GAGTC	5 cut(s)	916, 1031, 1566, 1988, 2263
PpsI	GAGTC	5 cut(s)	916, 1031, 1566, 1988, 2263
PpuMI	RGGWCCY	1 cut(s)	1223
PshBI	ATTAAT	1 cut(s)	591
Psp1406I	AACGTT	1 cut(s)	127
Psp5II	RGGWCCY	1 cut(s)	1223
Psp6I	CCWGG	4 cut(s)	706, 718, 1698, 1853
PspEI	GGTNACC	1 cut(s)	619
PspFI	CCCAGC	2 cut(s)	1228, 2263
PspGI	CCWGG	4 cut(s)	706, 718, 1698, 1853
PspLI	CGTACG	1 cut(s)	2245
PspN4I	GGNNCC	6 cut(s)	318, 962, 1224, 1225, 2020, 2393
PspPI	GGNCC	4 cut(s)	518, 950, 1223, 2391
PspPPI	RGGWCCY	1 cut(s)	1223
PsrI	GAACNNNNNNTAC	2 cut(s)	1994, 2026
PstI	CTGCAG	1 cut(s)	1840
PsuI	RGATCY	2 cut(s)	316, 1605
PsyI	GACNNNGTC	2 cut(s)	2186, 2200
PvuII	CAGCTG	2 cut(s)	1232, 1748
RsaI	GTAC	8 cut(s)	643, 730, 962, 981, 1165, 1493, 1866, 2247
RsaNI	GTAC	8 cut(s)	642, 729, 961, 980, 1164, 1492, 1865, 2246
RseI	CAYNNNNRTG	1 cut(s)	1001
SapI	GCTCTTC	1 cut(s)	945
SaqAI	TTAA	3 cut(s)	591, 1185, 1203
Sau96I	GGNCC	4 cut(s)	518, 950, 1223, 2391
SchI	GAGTC	5 cut(s)	916, 1031, 1567, 1989, 2264
ScrFI	CCNGG	6 cut(s)	639, 708, 720, 1700, 1855, 2260
SfaNI	GCATC	1 cut(s)	2421
SfcI	CTRYAG	3 cut(s)	844, 1836, 1872
SfuI	TTCGAA	1 cut(s)	816
SinI	GGWCC	3 cut(s)	950, 1223, 2391
SmiMI	CAYNNNNRTG	1 cut(s)	1001
SsiI	CCGC	9 cut(s)	102, 122, 188, 254, 521, 617, 857, 2308, 2373
SspMI	CTAG	3 cut(s)	243, 1175, 2366
StyD4I	CCNGG	6 cut(s)	637, 706, 718, 1698, 1853, 2258
StyI	CCWWGG	2 cut(s)	154, 556
TaaI	ACNGT	8 cut(s)	436, 673, 694, 1479, 1496, 1864, 2038, 2250
TaiI	ACGT	2 cut(s)	130, 2247
TaqI	TCGA	5 cut(s)	131, 418, 634, 816, 1725
TaqII	GACCGA	1 cut(s)	2275
TatI	WGTACW	4 cut(s)	728, 979, 1163, 1864
TauI	GCSGC	2 cut(s)	2310, 2375
TfiI	GAWTC	7 cut(s)	49, 167, 546, 1072, 1380, 1742, 2447
Tru1I	TTAA	3 cut(s)	591, 1185, 1203
Tru9I	TTAA	3 cut(s)	591, 1185, 1203
TscAI	CASTG	5 cut(s)	774, 1035, 1062, 1676, 2350
TseFI	GTSAC	1 cut(s)	2188
TseI	GCWGC	8 cut(s)	370, 1009, 1232, 1568, 1748, 1835, 1838, 2340
Tsp45I	GTSAC	1 cut(s)	2188
TspGWI	ACGGA	2 cut(s)	1013, 2416
TspRI	CASTG	5 cut(s)	774, 1035, 1062, 1676, 2350
Tth111I	GACNNNGTC	2 cut(s)	2186, 2200
VpaK11BI	GGWCC	3 cut(s)	950, 1223, 2391
VspI	ATTAAT	1 cut(s)	591
XapI	RAATTY	7 cut(s)	274, 420, 1199, 1531, 1849, 2272, 2419
XceI	RCATGY	1 cut(s)	986
XspI	CTAG	3 cut(s)	243, 1175, 2366
Zsp2I	ATGCAT	1 cut(s)	1160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.