protein At5g03900, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g48680 |
| rosa_laevigata | RLG00000021789 |
| rosa_multiflora | Rmu_sc0002416.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00082860 |
| rosa_rugosa | Rorug02G0534200 |
| rosa_samantha | Rh2AG604600 Rh2BG617600 Rh2CG585800 Rh2DG628200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 561 |
| AciI | CCGC | 1 cut(s) | 453 |
| AclI | AACGTT | 1 cut(s) | 264 |
| AcsI | RAATTY | 3 cut(s) | 5, 323, 675 |
| AcuI | CTGAAG | 2 cut(s) | 150, 630 |
| AfaI | GTAC | 3 cut(s) | 460, 480, 686 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 56, 660 |
| AgeI | ACCGGT | 1 cut(s) | 273 |
| AgsI | TTSAA | 2 cut(s) | 578, 620 |
| AluBI | AGCT | 2 cut(s) | 136, 363 |
| AluI | AGCT | 2 cut(s) | 136, 363 |
| Alw21I | GWGCWC | 1 cut(s) | 661 |
| AoxI | GGCC | 1 cut(s) | 235 |
| ApeKI | GCWGC | 3 cut(s) | 125, 473, 605 |
| ApoI | RAATTY | 3 cut(s) | 5, 323, 675 |
| AsiGI | ACCGGT | 1 cut(s) | 273 |
| AspS9I | GGNCC | 1 cut(s) | 235 |
| AsuC2I | CCSGG | 1 cut(s) | 407 |
| Bbv12I | GWGCWC | 1 cut(s) | 661 |
| BbvI | GCAGC | 3 cut(s) | 137, 485, 592 |
| BccI | CCATC | 4 cut(s) | 72, 146, 246, 251 |
| BceAI | ACGGC | 1 cut(s) | 461 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 119, 153, 603, 637 |
| BcnI | CCSGG | 1 cut(s) | 407 |
| BfaI | CTAG | 1 cut(s) | 360 |
| BisI | GCNGC | 3 cut(s) | 126, 474, 606 |
| BlsI | GCNGC | 3 cut(s) | 127, 475, 607 |
| BmcAI | AGTACT | 2 cut(s) | 460, 686 |
| Bme1390I | CCNGG | 1 cut(s) | 407 |
| BmgT120I | GGNCC | 1 cut(s) | 235 |
| BmrFI | CCNGG | 1 cut(s) | 407 |
| BpmI | CTGGAG | 1 cut(s) | 470 |
| Bpu10I | CCTNAGC | 1 cut(s) | 527 |
| BpuEI | CTTGAG | 1 cut(s) | 389 |
| BpuMI | CCSGG | 1 cut(s) | 407 |
| BsaWI | WCCGGW | 1 cut(s) | 273 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 56, 660 |
| Bse118I | RCCGGY | 1 cut(s) | 273 |
| Bse1I | ACTGG | 1 cut(s) | 654 |
| BseGI | GGATG | 2 cut(s) | 238, 415 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 56, 660 |
| BseMII | CTCAG | 1 cut(s) | 541 |
| BseNI | ACTGG | 1 cut(s) | 654 |
| BseXI | GCAGC | 3 cut(s) | 137, 485, 592 |
| BshFI | GGCC | 1 cut(s) | 237 |
| BshTI | ACCGGT | 1 cut(s) | 273 |
| BsiHKAI | GWGCWC | 1 cut(s) | 661 |
| BsiSI | CCGG | 2 cut(s) | 274, 406 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 56, 660 |
| BsnI | GGCC | 1 cut(s) | 237 |
| Bsp1286I | GDGCHC | 1 cut(s) | 661 |
| Bsp143I | GATC | 1 cut(s) | 648 |
| BspACI | CCGC | 1 cut(s) | 453 |
| BspANI | GGCC | 1 cut(s) | 237 |
| BspCNI | CTCAG | 1 cut(s) | 540 |
| BspHI | TCATGA | 1 cut(s) | 64 |
| BspQI | GCTCTTC | 1 cut(s) | 126 |
| BsrFI | RCCGGY | 1 cut(s) | 273 |
| BsrI | ACTGG | 1 cut(s) | 654 |
| BssAI | RCCGGY | 1 cut(s) | 273 |
| BssMI | GATC | 1 cut(s) | 648 |
| Bst4CI | ACNGT | 2 cut(s) | 44, 288 |
| Bst6I | CTCTTC | 3 cut(s) | 63, 68, 126 |
| BstC8I | GCNNGC | 1 cut(s) | 138 |
| BstDEI | CTNAG | 3 cut(s) | 462, 527, 638 |
| BstF5I | GGATG | 2 cut(s) | 238, 415 |
| BstKTI | GATC | 1 cut(s) | 651 |
| BstMBI | GATC | 1 cut(s) | 648 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 611 |
| BstSCI | CCNGG | 1 cut(s) | 405 |
| BstV1I | GCAGC | 3 cut(s) | 137, 485, 592 |
| BsuRI | GGCC | 1 cut(s) | 237 |
| BtsCI | GGATG | 2 cut(s) | 238, 415 |
| BtsIMutI | CAGTG | 2 cut(s) | 284, 661 |
| Cac8I | GCNNGC | 1 cut(s) | 138 |
| CciI | TCATGA | 1 cut(s) | 64 |
| Cfr10I | RCCGGY | 1 cut(s) | 273 |
| Cfr13I | GGNCC | 1 cut(s) | 235 |
| Csp6I | GTAC | 3 cut(s) | 459, 479, 685 |
| CspAI | ACCGGT | 1 cut(s) | 273 |
| CviAII | CATG | 2 cut(s) | 65, 208 |
| CviJI | RGCY | 7 cut(s) | 128, 136, 237, 363, 476, 605, 671 |
| CviKI_1 | RGCY | 7 cut(s) | 128, 136, 237, 363, 476, 605, 671 |
| CviQI | GTAC | 3 cut(s) | 459, 479, 685 |
| DdeI | CTNAG | 3 cut(s) | 462, 527, 638 |
| DpnI | GATC | 1 cut(s) | 650 |
| DpnII | GATC | 1 cut(s) | 648 |
| Eam1104I | CTCTTC | 3 cut(s) | 63, 68, 126 |
| EarI | CTCTTC | 3 cut(s) | 63, 68, 126 |
| Eco57I | CTGAAG | 2 cut(s) | 150, 630 |
| EcoRI | GAATTC | 1 cut(s) | 675 |
| FaeI | CATG | 2 cut(s) | 68, 211 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 347, 379, 371, 403 |
| FatI | CATG | 2 cut(s) | 64, 207 |
| Fnu4HI | GCNGC | 3 cut(s) | 126, 474, 606 |
| FokI | GGATG | 2 cut(s) | 225, 422 |
| Fsp4HI | GCNGC | 3 cut(s) | 126, 474, 606 |
| FspBI | CTAG | 1 cut(s) | 360 |
| GluI | GCNGC | 3 cut(s) | 126, 474, 606 |
| GsuI | CTGGAG | 1 cut(s) | 470 |
| HaeIII | GGCC | 1 cut(s) | 237 |
| HapII | CCGG | 2 cut(s) | 274, 406 |
| Hin1II | CATG | 2 cut(s) | 68, 211 |
| HinfI | GANTC | 3 cut(s) | 14, 517, 620 |
| HpaII | CCGG | 2 cut(s) | 274, 406 |
| Hpy166II | GTNNAC | 1 cut(s) | 279 |
| Hpy188I | TCNGA | 2 cut(s) | 663, 681 |
| Hpy188III | TCNNGA | 5 cut(s) | 65, 149, 334, 368, 487 |
| Hpy8I | GTNNAC | 1 cut(s) | 279 |
| Hpy99I | CGWCG | 1 cut(s) | 44 |
| HpyCH4III | ACNGT | 2 cut(s) | 44, 288 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 611 |
| HpyF3I | CTNAG | 3 cut(s) | 462, 527, 638 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| Hsp92II | CATG | 2 cut(s) | 68, 211 |
| Kzo9I | GATC | 1 cut(s) | 648 |
| LguI | GCTCTTC | 1 cut(s) | 126 |
| LmnI | GCTCC | 1 cut(s) | 145 |
| Lsp1109I | GCAGC | 3 cut(s) | 137, 485, 592 |
| MaeI | CTAG | 1 cut(s) | 360 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MaeIII | GTNAC | 4 cut(s) | 210, 244, 438, 584 |
| MalI | GATC | 1 cut(s) | 650 |
| MboI | GATC | 1 cut(s) | 648 |
| MboII | GAAGA | 5 cut(s) | 80, 85, 143, 266, 319 |
| MhlI | GDGCHC | 1 cut(s) | 661 |
| MluCI | AATT | 7 cut(s) | 5, 95, 174, 302, 323, 347, 675 |
| MnlI | CCTC | 4 cut(s) | 115, 172, 226, 557 |
| MspI | CCGG | 2 cut(s) | 274, 406 |
| MspR9I | CCNGG | 1 cut(s) | 407 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 611 |
| NciI | CCSGG | 1 cut(s) | 407 |
| NdeII | GATC | 1 cut(s) | 648 |
| NlaIII | CATG | 2 cut(s) | 68, 211 |
| PagI | TCATGA | 1 cut(s) | 64 |
| PciSI | GCTCTTC | 1 cut(s) | 126 |
| PfeI | GAWTC | 3 cut(s) | 14, 517, 620 |
| PfoI | TCCNGGA | 1 cut(s) | 405 |
| PinAI | ACCGGT | 1 cut(s) | 273 |
| PkrI | GCNGC | 3 cut(s) | 127, 475, 607 |
| PsiI | TTATAA | 1 cut(s) | 561 |
| Psp1406I | AACGTT | 1 cut(s) | 264 |
| PspPI | GGNCC | 1 cut(s) | 235 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 254, 286 |
| RsaI | GTAC | 3 cut(s) | 460, 480, 686 |
| RsaNI | GTAC | 3 cut(s) | 459, 479, 685 |
| SapI | GCTCTTC | 1 cut(s) | 126 |
| SatI | GCNGC | 3 cut(s) | 126, 474, 606 |
| Sau3AI | GATC | 1 cut(s) | 648 |
| Sau96I | GGNCC | 1 cut(s) | 235 |
| ScaI | AGTACT | 2 cut(s) | 460, 686 |
| ScrFI | CCNGG | 1 cut(s) | 407 |
| SduI | GDGCHC | 1 cut(s) | 661 |
| SetI | ASST | 8 cut(s) | 61, 107, 138, 217, 267, 365, 384, 533 |
| SmlI | CTYRAG | 1 cut(s) | 368 |
| SmoI | CTYRAG | 1 cut(s) | 368 |
| Sse9I | AATT | 7 cut(s) | 5, 95, 174, 302, 323, 347, 675 |
| SsiI | CCGC | 1 cut(s) | 453 |
| SspMI | CTAG | 1 cut(s) | 360 |
| StyD4I | CCNGG | 1 cut(s) | 405 |
| TaaI | ACNGT | 2 cut(s) | 44, 288 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TaqI | TCGA | 1 cut(s) | 333 |
| TasI | AATT | 7 cut(s) | 5, 95, 174, 302, 323, 347, 675 |
| TatI | WGTACW | 2 cut(s) | 458, 684 |
| TfiI | GAWTC | 3 cut(s) | 14, 517, 620 |
| TscAI | CASTG | 2 cut(s) | 291, 661 |
| TseI | GCWGC | 3 cut(s) | 125, 473, 605 |
| TspDTI | ATGAA | 8 cut(s) | 17, 53, 81, 88, 196, 267, 319, 461 |
| TspRI | CASTG | 2 cut(s) | 291, 661 |
| XapI | RAATTY | 3 cut(s) | 5, 323, 675 |
| XspI | CTAG | 1 cut(s) | 360 |
| ZrmI | AGTACT | 2 cut(s) | 460, 686 |