Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0011661

Physical Location & Seq

Genomic Coordinates Reverse (-)

2510605 .. 2514562

Gene Structure 3958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG037600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGAGCAATACGAAATTCTGGAGCAAATTGGGAAAGGGGCTTTTGGTTCTGCACTTCTTGTCAGGCACAAGCATGAAAAGAAGAAGTATGTGCTAAAAAAGATTCGTCTTGCTCGCCAGACTGATAGATCACGGAGATCTGCACATCAGGAGATGGAGCTCATTTCTAAATTCAAAAATCCATTTATTGTGGAGTATAAAGATTCTTGGGTCGAAAAGAGTTGCTATGTATGCATAGTTATAGGTTACTGTGCTGGAGGAGACATGGCAGAAGCTATAAAAAAGGCCAATGGAATTCTTTTTCCTGAAGAGAAAATCTGTAAGTGGCTTGTCCAACTTCTGATGGCACTCGACTATTTGCACAAGAATCATATTCTTCATCGTGATGTCAAGTGTTCTAATATCTTCTTAACAAAAGATCAAGATATACGCCTGGGTGACTTTGGACTTGCAAAAATGTTGACTTCAGATGATCTTGCCTCTTCTGTTGTGGGAACTCCTAGCTATATGTGTCCCGAACTTCTTGCTGATATACCTTATGGTTCCAAATCAGACATTTGGTCTTTGGGATGCTGCATATATGAAATGACTTCTCATAGACCAGCGTTTAAAGCATTTGATATACAAGCACTTATTACCAAAATTAATAAGTCTATAGTGGCTCCCCTTCCCACAAAGTACACTAGTGCATTTCGAGGCCTTGTTAAAACCATGCTTCGGAAAAACCCAGAACTCAGGCCAAGTGCTGCGGAGCTGCTCCGTCACCCATACCTTCAGCCTTATGTTCAAAAGGTTCATCTCAAAATCAACAGCCCCAATTACTTGAAGAAAACTAGATTTTCTGAGACAGAAGATGTTCGATACTCAACATACCAGGAGAAGCAGCGTATATTAAGCAATGATAGGACTTTGAATCCTAGTATTTCTGGAGGATCATCTGTTGGTGTCACCCATAAAAAGGCAGCCATTCGCAAGCAGCCAATTGCTTCCAAAACATCAAATAATGTCCGGACTCAGAAAATTACTCCAGCAAAAGCTTCTGCCACTCCCAAGAGATGGATGGAGCCAAAGAATCGCTCATCGCTTCCTGTTTCACGTACTCAGGACAAAGCAGTAACTACAACTCGCAGAGCATCATTGCCATTCTCAACAAGACCTGCAATTAAACAATCCCCTTTCCGGCCTAGTGTTGGTGTCCTACACTGTATTAAATCTCCTGATGTCTCTGTCAATTCCCCTCGAATTGACAGGATAGCTGAATTCCCATTAGCATCATATGAAGAACAATTGTATGAAGAACAATTTTTGCCTACCCGTAGAGGCTCACCAATCTCTGTGCAAGGCTCATCTGGCTCCCCACAATCTGGTGACCGTTCAATCATGAAAGACAAGTGCACGGTTCAGATATTTGATAAAGCCTCTCGCAGGCTTAGTTTCACAGGTGCATGGCAGGGAATTGACCGCAGCATGTTTCAAGTTGATAGAGAAAATCGAAGTGATGCATGTTCTGATCAGAATGCAACCGCCGGTGGAGCATCGAGCCGGACCTCATCAGACACACGCCGCCGATTTGACACCTCATCGTACCAGCAAAGGGCTGAAGCTTTGGAAGGGCTGCTCGAGTTTAGTGCAAGGTTGCTGCAATACGAAAGATATGAAGAGCTTGGGGTGTTGCTGAAACCTTTTGGTCCTGGGAAGGTGGATCCTAGGGAAACTGCTATTTGGTTAACTAAGAGCATCAAGGAAAATACTGTCAAACAGGATGATGAGATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

592

Amino Acids

66.94

Weight (kDa)

9.6

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 258	1.7e-65	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 254	5.4e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011661)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300
rosa_chinensis	RchiOBHm_Chr3g0451761
rosa_laevigata	RLG00000025651
rosa_multiflora	Rmu_sc0006510.1_g000022
rosa_roxburghii	Rroxscaffold_164G00436330 Rroxscaffold_6G00428960
rosa_rugosa	Rorug02G0635700 Rorug02G0635800 Rorug02G0635900 Rorug02G0636000
rosa_samantha	Rh3AG037600 Rh3BG038700 Rh3CG037200 Rh3DG037900
rosa_wichuraiana	Rw3G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1165
AccB7I	CCANNNNNTGG	2 cut(s)	1056, 1364
AccIII	TCCGGA	1 cut(s)	1008
AciI	CCGC	4 cut(s)	749, 1462, 1524, 1564
AclWI	GGATC	3 cut(s)	940, 1697, 1710
AcsI	RAATTY	4 cut(s)	15, 170, 294, 1259
AcuI	CTGAAG	4 cut(s)	327, 450, 758, 1620
AfaI	GTAC	3 cut(s)	680, 1099, 1586
AfiI	CCNNNNNNNGG	8 cut(s)	717, 958, 1056, 1179, 1190, 1364, 1425, 1594
AgsI	TTSAA	6 cut(s)	175, 788, 826, 913, 1377, 1475
AhdI	GACNNNNNGTC	1 cut(s)	559
AhlI	ACTAGT	1 cut(s)	683
AjnI	CCWGG	3 cut(s)	432, 873, 1690
AluBI	AGCT	8 cut(s)	160, 275, 504, 754, 1037, 1256, 1604, 1663
AluI	AGCT	8 cut(s)	160, 275, 504, 754, 1037, 1256, 1604, 1663
Alw21I	GWGCWC	2 cut(s)	162, 1397
Alw26I	GTCTC	3 cut(s)	255, 839, 1228
Alw44I	GTGCAC	1 cut(s)	1393
AlwI	GGATC	3 cut(s)	940, 1697, 1710
Ama87I	CYCGRG	1 cut(s)	1619
Aor13HI	TCCGGA	1 cut(s)	1008
AoxI	GGCC	4 cut(s)	285, 697, 737, 1181
ApaLI	GTGCAC	1 cut(s)	1393
ApeKI	GCWGC	9 cut(s)	573, 746, 754, 883, 962, 976, 1464, 1615, 1639
ApoI	RAATTY	4 cut(s)	15, 170, 294, 1259
AseI	ATTAAT	2 cut(s)	645, 1773
Asp700I	GAANNNNTTC	1 cut(s)	855
AspA2I	CCTAGG	1 cut(s)	1706
AspS9I	GGNCC	2 cut(s)	1545, 1688
AsuHPI	GGTGA	5 cut(s)	449, 755, 940, 1317, 1379
AvaI	CYCGRG	1 cut(s)	1619
AvaII	GGWCC	2 cut(s)	1545, 1688
AvrII	CCTAGG	1 cut(s)	1706
BaeGI	GKGCMC	1 cut(s)	1397
BamHI	GGATCC	1 cut(s)	1702
BanII	GRGCYC	1 cut(s)	162
Bbv12I	GWGCWC	2 cut(s)	162, 1397
BbvI	GCAGC	9 cut(s)	560, 733, 741, 895, 974, 988, 1476, 1602, 1626
BccI	CCATC	4 cut(s)	148, 337, 1050, 1054
BcgI	CGANNNNNNTGC	4 cut(s)	506, 540, 1610, 1644
BciT130I	CCWGG	3 cut(s)	434, 875, 1692
BclI	TGATCA	1 cut(s)	1510
BcoDI	GTCTC	3 cut(s)	255, 839, 1228
BcuI	ACTAGT	1 cut(s)	683
BfaI	CTAG	6 cut(s)	501, 684, 834, 918, 1185, 1707
BfmI	CTRYAG	1 cut(s)	654
BfuAI	ACCTGC	1 cut(s)	1165
BglII	AGATCT	1 cut(s)	137
BlnI	CCTAGG	1 cut(s)	1706
Bme1390I	CCNGG	3 cut(s)	434, 875, 1692
Bme18I	GGWCC	2 cut(s)	1545, 1688
BmeRI	GACNNNNNGTC	1 cut(s)	559
BmeT110I	CYCGRG	1 cut(s)	1619
BmgT120I	GGNCC	2 cut(s)	1545, 1688
BmiI	GGNNCC	5 cut(s)	544, 663, 1065, 1354, 1704
BmrFI	CCNGG	3 cut(s)	434, 875, 1692
BmsI	GCATC	6 cut(s)	560, 1142, 1280, 1489, 1544, 1746
BpmI	CTGGAG	4 cut(s)	41, 276, 948, 1011
BsaAI	YACGTR	1 cut(s)	1097
BsaJI	CCNNGG	3 cut(s)	433, 1691, 1706
BsaWI	WCCGGW	1 cut(s)	1008
Bsc4I	CCNNNNNNNGG	8 cut(s)	717, 958, 1056, 1179, 1190, 1364, 1425, 1594
Bse118I	RCCGGY	1 cut(s)	1526
Bse3DI	GCAATG	2 cut(s)	904, 1136
BseAI	TCCGGA	1 cut(s)	1008
BseBI	CCWGG	3 cut(s)	434, 875, 1692
BseDI	CCNNGG	3 cut(s)	433, 1691, 1706
BseGI	GGATG	3 cut(s)	575, 1065, 1768
BseLI	CCNNNNNNNGG	8 cut(s)	717, 958, 1056, 1179, 1190, 1364, 1425, 1594
BseMI	GCAATG	2 cut(s)	904, 1136
BseMII	CTCAG	4 cut(s)	748, 834, 1028, 1115
BseRI	GAGGAG	1 cut(s)	273
BseSI	GKGCMC	1 cut(s)	1397
BseXI	GCAGC	9 cut(s)	560, 733, 741, 895, 974, 988, 1476, 1602, 1626
BsgI	GTGCAG	2 cut(s)	36, 126
BshFI	GGCC	4 cut(s)	287, 699, 739, 1183
BsiHKAI	GWGCWC	2 cut(s)	162, 1397
BsiHKCI	CYCGRG	1 cut(s)	1619
BsiSI	CCGG	4 cut(s)	1009, 1180, 1527, 1543
BslFI	GGGAC	1 cut(s)	498
BslI	CCNNNNNNNGG	8 cut(s)	717, 958, 1056, 1179, 1190, 1364, 1425, 1594
BsmAI	GTCTC	3 cut(s)	255, 839, 1228
BsmFI	GGGAC	1 cut(s)	498
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	4 cut(s)	287, 699, 739, 1183
BsoBI	CYCGRG	1 cut(s)	1619
Bsp1286I	GDGCHC	2 cut(s)	162, 1397
Bsp13I	TCCGGA	1 cut(s)	1008
Bsp143I	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
BspACI	CCGC	4 cut(s)	749, 1462, 1524, 1564
BspANI	GGCC	4 cut(s)	287, 699, 739, 1183
BspCNI	CTCAG	4 cut(s)	747, 835, 1027, 1114
BspEI	TCCGGA	1 cut(s)	1008
BspHI	TCATGA	1 cut(s)	1380
BspLI	GGNNCC	5 cut(s)	544, 663, 1065, 1354, 1704
BspMI	ACCTGC	1 cut(s)	1165
BspPI	GGATC	3 cut(s)	940, 1697, 1710
BspQI	GCTCTTC	1 cut(s)	1653
BsrDI	GCAATG	2 cut(s)	904, 1136
BsrFI	RCCGGY	1 cut(s)	1526
BssAI	RCCGGY	1 cut(s)	1526
BssECI	CCNNGG	3 cut(s)	433, 1691, 1706
BssMI	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
BssT1I	CCWWGG	1 cut(s)	1706
Bst2UI	CCWGG	3 cut(s)	434, 875, 1692
Bst4CI	ACNGT	5 cut(s)	251, 1205, 1373, 1399, 1753
Bst6I	CTCTTC	3 cut(s)	303, 487, 1653
BstBAI	YACGTR	1 cut(s)	1097
BstC8I	GCNNGC	3 cut(s)	115, 974, 1427
BstDEI	CTNAG	6 cut(s)	734, 843, 1014, 1101, 1430, 1731
BstEII	GGTNACC	1 cut(s)	1367
BstENI	CCTNNNNNAGG	1 cut(s)	1423
BstF5I	GGATG	3 cut(s)	575, 1065, 1768
BstKTI	GATC	7 cut(s)	131, 140, 421, 475, 935, 1513, 1705
BstMAI	GTCTC	3 cut(s)	255, 839, 1228
BstMBI	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
BstMWI	GCNNNNNNNGC	4 cut(s)	231, 611, 1350, 1532
BstNI	CCWGG	3 cut(s)	434, 875, 1692
BstNSI	RCATGY	2 cut(s)	1471, 1506
BstPI	GGTNACC	1 cut(s)	1367
BstSCI	CCNGG	3 cut(s)	432, 873, 1690
BstSFI	CTRYAG	1 cut(s)	654
BstSLI	GKGCMC	1 cut(s)	1397
BstV1I	GCAGC	9 cut(s)	560, 733, 741, 895, 974, 988, 1476, 1602, 1626
BstX2I	RGATCY	2 cut(s)	137, 1702
BstYI	RGATCY	2 cut(s)	137, 1702
BsuRI	GGCC	4 cut(s)	287, 699, 739, 1183
BtgZI	GCGATG	1 cut(s)	1065
BtsCI	GGATG	3 cut(s)	575, 1065, 1768
BtsIMutI	CAGTG	1 cut(s)	1201
BveI	ACCTGC	1 cut(s)	1165
Cac8I	GCNNGC	3 cut(s)	115, 974, 1427
CciI	TCATGA	1 cut(s)	1380
Cfr10I	RCCGGY	1 cut(s)	1526
Cfr13I	GGNCC	2 cut(s)	1545, 1688
Csp6I	GTAC	3 cut(s)	679, 1098, 1585
CviAII	CATG	7 cut(s)	74, 265, 712, 1381, 1446, 1468, 1503
CviQI	GTAC	3 cut(s)	679, 1098, 1585
DdeI	CTNAG	6 cut(s)	734, 843, 1014, 1101, 1430, 1731
DpnI	GATC	7 cut(s)	130, 139, 420, 474, 934, 1512, 1704
DpnII	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
DraI	TTTAAA	1 cut(s)	610
DriI	GACNNNNNGTC	1 cut(s)	559
Eam1104I	CTCTTC	3 cut(s)	303, 487, 1653
Eam1105I	GACNNNNNGTC	1 cut(s)	559
EarI	CTCTTC	3 cut(s)	303, 487, 1653
Ecl136II	GAGCTC	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1706
Eco147I	AGGCCT	1 cut(s)	699
Eco24I	GRGCYC	1 cut(s)	162
Eco47I	GGWCC	2 cut(s)	1545, 1688
Eco53kI	GAGCTC	1 cut(s)	160
Eco57I	CTGAAG	4 cut(s)	327, 450, 758, 1620
Eco88I	CYCGRG	1 cut(s)	1619
Eco91I	GGTNACC	1 cut(s)	1367
EcoICRI	GAGCTC	1 cut(s)	160
EcoNI	CCTNNNNNAGG	1 cut(s)	1423
EcoO65I	GGTNACC	1 cut(s)	1367
EcoRI	GAATTC	2 cut(s)	294, 1259
EcoRII	CCWGG	3 cut(s)	432, 873, 1690
EcoT14I	CCWWGG	1 cut(s)	1706
EcoT22I	ATGCAT	2 cut(s)	236, 1504
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	1 cut(s)	1706
FaeI	CATG	7 cut(s)	77, 268, 715, 1384, 1449, 1471, 1506
FaqI	GGGAC	1 cut(s)	498
FatI	CATG	7 cut(s)	73, 264, 711, 1380, 1445, 1467, 1502
FauNDI	CATATG	1 cut(s)	1276
FbaI	TGATCA	1 cut(s)	1510
FokI	GGATG	3 cut(s)	582, 1072, 1775
FriOI	GRGCYC	1 cut(s)	162
FspBI	CTAG	6 cut(s)	501, 684, 834, 918, 1185, 1707
GsuI	CTGGAG	4 cut(s)	41, 276, 948, 1011
HaeIII	GGCC	4 cut(s)	287, 699, 739, 1183
HapII	CCGG	4 cut(s)	1009, 1180, 1527, 1543
Hin1II	CATG	7 cut(s)	77, 268, 715, 1384, 1449, 1471, 1506
HincII	GTYRAC	2 cut(s)	462, 1728
HindII	GTYRAC	2 cut(s)	462, 1728
HindIII	AAGCTT	2 cut(s)	1035, 1602
HinfI	GANTC	6 cut(s)	103, 203, 367, 913, 1012, 1072
HpaI	GTTAAC	1 cut(s)	1728
HpaII	CCGG	4 cut(s)	1009, 1180, 1527, 1543
HphI	GGTGA	5 cut(s)	449, 755, 940, 1317, 1379
Hpy166II	GTNNAC	4 cut(s)	462, 681, 1395, 1728
Hpy8I	GTNNAC	4 cut(s)	462, 681, 1395, 1728
HpyAV	CCTTC	4 cut(s)	677, 782, 1604, 1690
HpyCH4III	ACNGT	5 cut(s)	251, 1205, 1373, 1399, 1753
HpyCH4IV	ACGT	1 cut(s)	1096
HpyF10VI	GCNNNNNNNGC	4 cut(s)	231, 611, 1350, 1532
HpyF3I	CTNAG	6 cut(s)	734, 843, 1014, 1101, 1430, 1731
HpySE526I	ACGT	1 cut(s)	1096
Hsp92II	CATG	7 cut(s)	77, 268, 715, 1384, 1449, 1471, 1506
Kpn2I	TCCGGA	1 cut(s)	1008
Ksp22I	TGATCA	1 cut(s)	1510
KspAI	GTTAAC	1 cut(s)	1728
Kzo9I	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
LguI	GCTCTTC	1 cut(s)	1653
LmnI	GCTCC	9 cut(s)	4, 22, 157, 667, 751, 762, 1063, 1358, 1532
Lsp1109I	GCAGC	9 cut(s)	560, 733, 741, 895, 974, 988, 1476, 1602, 1626
LweI	GCATC	6 cut(s)	560, 1142, 1280, 1489, 1544, 1746
MaeI	CTAG	6 cut(s)	501, 684, 834, 918, 1185, 1707
MaeII	ACGT	1 cut(s)	1096
MaeIII	GTNAC	6 cut(s)	245, 437, 761, 946, 1114, 1367
MalI	GATC	7 cut(s)	130, 139, 420, 474, 934, 1512, 1704
MboI	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
MfeI	CAATTG	2 cut(s)	981, 1286
MflI	RGATCY	2 cut(s)	137, 1702
MhlI	GDGCHC	2 cut(s)	162, 1397
MlyI	GAGTC	1 cut(s)	1006
MmeI	TCCRAC	1 cut(s)	358
MnlI	CCTC	9 cut(s)	251, 490, 689, 923, 1248, 1313, 1429, 1558, 1588
Mph1103I	ATGCAT	2 cut(s)	236, 1504
MroI	TCCGGA	1 cut(s)	1008
MroXI	GAANNNNTTC	1 cut(s)	855
MseI	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1164, 1209, 1727, 1773
MslI	CAYNNNNRTG	2 cut(s)	72, 384
MspI	CCGG	4 cut(s)	1009, 1180, 1527, 1543
MspR9I	CCNGG	3 cut(s)	434, 875, 1692
MunI	CAATTG	2 cut(s)	981, 1286
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	3 cut(s)	434, 875, 1692
MwoI	GCNNNNNNNGC	4 cut(s)	231, 611, 1350, 1532
NdeI	CATATG	1 cut(s)	1276
NdeII	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
NlaIII	CATG	7 cut(s)	77, 268, 715, 1384, 1449, 1471, 1506
NlaIV	GGNNCC	5 cut(s)	544, 663, 1065, 1354, 1704
NmuCI	GTSAC	4 cut(s)	437, 761, 946, 1367
NsiI	ATGCAT	2 cut(s)	236, 1504
NspI	RCATGY	2 cut(s)	1471, 1506
PaeR7I	CTCGAG	1 cut(s)	1619
PagI	TCATGA	1 cut(s)	1380
PceI	AGGCCT	1 cut(s)	699
PciSI	GCTCTTC	1 cut(s)	1653
PctI	GAATGC	1 cut(s)	1522
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	5 cut(s)	103, 203, 367, 913, 1072
PflMI	CCANNNNNTGG	2 cut(s)	1056, 1364
PleI	GAGTC	1 cut(s)	1006
PpsI	GAGTC	1 cut(s)	1006
Ppu21I	YACGTR	1 cut(s)	1097
PshBI	ATTAAT	2 cut(s)	645, 1773
Psp124BI	GAGCTC	1 cut(s)	162
Psp6I	CCWGG	3 cut(s)	432, 873, 1690
PspEI	GGTNACC	1 cut(s)	1367
PspGI	CCWGG	3 cut(s)	432, 873, 1690
PspN4I	GGNNCC	5 cut(s)	544, 663, 1065, 1354, 1704
PspPI	GGNCC	2 cut(s)	1545, 1688
PspXI	VCTCGAGB	1 cut(s)	1619
PsuI	RGATCY	2 cut(s)	137, 1702
RsaI	GTAC	3 cut(s)	680, 1099, 1586
RsaNI	GTAC	3 cut(s)	679, 1098, 1585
RseI	CAYNNNNRTG	2 cut(s)	72, 384
SacI	GAGCTC	1 cut(s)	162
SapI	GCTCTTC	1 cut(s)	1653
SaqAI	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1164, 1209, 1727, 1773
Sau3AI	GATC	7 cut(s)	128, 137, 418, 472, 932, 1510, 1702
Sau96I	GGNCC	2 cut(s)	1545, 1688
SchI	GAGTC	1 cut(s)	1006
ScrFI	CCNGG	3 cut(s)	434, 875, 1692
SduI	GDGCHC	2 cut(s)	162, 1397
SfaNI	GCATC	6 cut(s)	560, 1142, 1280, 1489, 1544, 1746
SfcI	CTRYAG	1 cut(s)	654
Sfr274I	CTCGAG	1 cut(s)	1619
SgrAI	CRCCGGYG	1 cut(s)	1526
SinI	GGWCC	2 cut(s)	1545, 1688
SlaI	CTCGAG	1 cut(s)	1619
SmiMI	CAYNNNNRTG	2 cut(s)	72, 384
SmlI	CTYRAG	1 cut(s)	1619
SmoI	CTYRAG	1 cut(s)	1619
SpeI	ACTAGT	1 cut(s)	683
SseBI	AGGCCT	1 cut(s)	699
SsiI	CCGC	4 cut(s)	749, 1462, 1524, 1564
SspMI	CTAG	6 cut(s)	501, 684, 834, 918, 1185, 1707
SstI	GAGCTC	1 cut(s)	162
StuI	AGGCCT	1 cut(s)	699
StyD4I	CCNGG	3 cut(s)	432, 873, 1690
StyI	CCWWGG	1 cut(s)	1706
TaaI	ACNGT	5 cut(s)	251, 1205, 1373, 1399, 1753
TaiI	ACGT	1 cut(s)	1099
TaqI	TCGA	8 cut(s)	213, 351, 694, 859, 1240, 1492, 1538, 1620
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	1 cut(s)	1566
TfiI	GAWTC	5 cut(s)	103, 203, 367, 913, 1072
Tru1I	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1164, 1209, 1727, 1773
Tru9I	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1164, 1209, 1727, 1773
TscAI	CASTG	1 cut(s)	1208
TseFI	GTSAC	4 cut(s)	437, 761, 946, 1367
TseI	GCWGC	9 cut(s)	573, 746, 754, 883, 962, 976, 1464, 1615, 1639
Tsp45I	GTSAC	4 cut(s)	437, 761, 946, 1367
TspDTI	ATGAA	8 cut(s)	90, 368, 597, 785, 1293, 1308, 1397, 1671
TspGWI	ACGGA	2 cut(s)	148, 749
TspRI	CASTG	1 cut(s)	1208
Van91I	CCANNNNNTGG	2 cut(s)	1056, 1364
VneI	GTGCAC	1 cut(s)	1393
VpaK11BI	GGWCC	2 cut(s)	1545, 1688
VspI	ATTAAT	2 cut(s)	645, 1773
XagI	CCTNNNNNAGG	1 cut(s)	1423
XapI	RAATTY	4 cut(s)	15, 170, 294, 1259
XceI	RCATGY	2 cut(s)	1471, 1506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1057
XhoI	CTCGAG	1 cut(s)	1619
XmaJI	CCTAGG	1 cut(s)	1706
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	6 cut(s)	501, 684, 834, 918, 1185, 1707
Zsp2I	ATGCAT	2 cut(s)	236, 1504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.