Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0011661

Physical Location & Seq

Genomic Coordinates Reverse (-)

2510268 .. 2516336

Gene Structure 6069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG037200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGAGCAATACGAAATTCTGGAGCAAATTGGGAAAGGGGCTTTTGGTTCTGCACTTCTTGTCAGGCACAAGCATGAAAAGAAGAAGTATGTGCTAAAAAAGATTCGTCTTGCTCGCCAGACTGATAGATCACGGAGATCTGCACATCAGGAGATGGAGCTCATTTCTAAATTCAAAAATCCATTTATTGTGGAGTATAAAGATTCTTGGGTCGAAAAGAGTTGCTATGTATGCATAGTTATAGGTTACTGTGCTGGAGGAGACATGGCAGAAGCTATAAAAAAGGCCAATGGAATTCTTTTTCCTGAAGAGAAAATCTGTAAGTGGCTTGTCCAACTTCTGATGGCACTCGACTATTTGCACAAGAATCATATTCTTCATCGTGATGTCAAGTGTTCTAATATCTTCTTAACAAAAGATCAAGATATACGCCTGGGTGACTTTGGACTTGCAAAAATGTTGACTTCAGATGATCTTGCCTCTTCTGTTGTGGGAACTCCTAGCTATATGTGTCCCGAACTTCTTGCTGATATACCTTATGGTTCCAAATCAGACATTTGGTCTTTGGGATGCTGCATATATGAAATGACTTCTCATAGACCAGCGTTTAAAGCATTTGATATACAAGCACTTATTACCAAAATTAATAAGTCTATAGTGGCTCCCCTTCCCACAAAGTACACTAGTGCATTTCGAGGCCTTGTTAAAACCATGCTTCGGAAAAACCCAGAACTCAGGCCAAGTGCTGCGGAGCTGCTCCGTCACCCATACCTTCAGCCTTATGTTCAAAAGGTTCATCTCAAAATCAACAGCCCCAATTACTTGAAGAAAACTAGATTTTCTGAGACAGAAGATGTTCGATACTCAACATACCAGGAGAAGCAGCGTATATTAAGCAATGATAGGACTTTGAATCCTAGTATTTCTGGAGGTGAGCAAGATTCTATGTGCTCTACTCAAGACATGAATGACAAGTTCAATTATCTGAATCAAGAATTCACAGGATCATCTGTTGGTGTCACCCATAAAAAGGCAGCCATTCGCAAGCAGCCAATTGCTTCCAAAACATCAAATAATGTCCGGACTCAGAAAATTACTCCAGCAAAAGCTTCTGCCACTCCCAAGAGATGGATGGAGCCAAAGAATCGCTCATCGCTTCCTGTTTCACGTACTCAGGACAAAGCAGTAACTACAACTCGCAGAGCATCATTGCCATTCTCAACAAGACCTGCAATTAAACAATCCCCTTTCCGGCCTAGTGTTGGTGTCCTACACTGTATTAAATCTCCTGATGTCTCTGTCAATTCCCCTCGAATTGACAGGATAGCTGAATTCCCATTAGCATCATATGAAGAACAATTGTATGAAGAACAATTTTTGCCTACCCGTAGAGGCTCACCAATCTCTGTGCAAGGCTCATCTGGCTCCCCACAATCTGGTGACCGTTCAATCATGAAAGACAAGTGCACGGTTCAGATATTTGATAAAGCCTCTCGCAGGCTTAGTTTCACAGGTGCATGGCAGGGAATTGACCGCAGCATGTTTCAAGTTGATAGAGAAAATCGAAGTGATGCATGTTCTGATCAGAATGCAACCGCCGGTGGAGCATCGAGCCGGACCTCATCAGACACACGCCGCCGATTTGACACCTCATCGTACCAGCAAAGGGCTGAAGCTTTGGAAGGGCTGCTCGAGTTTAGTGCAAGGTTGCTGCAATACGAAAGATATGAAGAGCTTGGGGTGTTGCTGAAACCTTTTGGTCCTGGGAAGGTGGATCCTAGGGAAACTGCTATTTGGTTAACTAAGAGCATCAAGGAAAATACTGTCAAACAGGATGATGAGATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

616

Amino Acids

69.76

Weight (kDa)

9.46

Isoelectric Point (pI)

50.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 258	1.8e-65	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 254	5.9e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011661)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300
rosa_chinensis	RchiOBHm_Chr3g0451761
rosa_laevigata	RLG00000025651
rosa_multiflora	Rmu_sc0006510.1_g000022
rosa_roxburghii	Rroxscaffold_164G00436330 Rroxscaffold_6G00428960
rosa_rugosa	Rorug02G0635700 Rorug02G0635800 Rorug02G0635900 Rorug02G0636000
rosa_samantha	Rh3AG037600 Rh3BG038700 Rh3CG037200 Rh3DG037900
rosa_wichuraiana	Rw3G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	2 cut(s)	1128, 1436
AccIII	TCCGGA	1 cut(s)	1080
AciI	CCGC	4 cut(s)	749, 1534, 1596, 1636
AclWI	GGATC	3 cut(s)	1012, 1769, 1782
AcsI	RAATTY	5 cut(s)	15, 170, 294, 995, 1331
AcuI	CTGAAG	4 cut(s)	327, 450, 758, 1692
AfaI	GTAC	3 cut(s)	680, 1171, 1658
AfiI	CCNNNNNNNGG	8 cut(s)	717, 1030, 1128, 1251, 1262, 1436, 1497, 1666
AgsI	TTSAA	7 cut(s)	175, 788, 826, 913, 979, 1449, 1547
AhdI	GACNNNNNGTC	1 cut(s)	559
AhlI	ACTAGT	1 cut(s)	683
AjnI	CCWGG	3 cut(s)	432, 873, 1762
AluBI	AGCT	8 cut(s)	160, 275, 504, 754, 1109, 1328, 1676, 1735
AluI	AGCT	8 cut(s)	160, 275, 504, 754, 1109, 1328, 1676, 1735
Alw21I	GWGCWC	3 cut(s)	162, 953, 1469
Alw26I	GTCTC	3 cut(s)	255, 839, 1300
Alw44I	GTGCAC	1 cut(s)	1465
AlwI	GGATC	3 cut(s)	1012, 1769, 1782
Ama87I	CYCGRG	1 cut(s)	1691
Aor13HI	TCCGGA	1 cut(s)	1080
AoxI	GGCC	4 cut(s)	285, 697, 737, 1253
ApaLI	GTGCAC	1 cut(s)	1465
ApeKI	GCWGC	9 cut(s)	573, 746, 754, 883, 1034, 1048, 1536, 1687, 1711
ApoI	RAATTY	5 cut(s)	15, 170, 294, 995, 1331
AseI	ATTAAT	2 cut(s)	645, 1845
Asp700I	GAANNNNTTC	1 cut(s)	855
AspA2I	CCTAGG	1 cut(s)	1778
AspS9I	GGNCC	2 cut(s)	1617, 1760
AsuHPI	GGTGA	6 cut(s)	449, 755, 944, 1012, 1389, 1451
AvaI	CYCGRG	1 cut(s)	1691
AvaII	GGWCC	2 cut(s)	1617, 1760
AvrII	CCTAGG	1 cut(s)	1778
BaeGI	GKGCMC	1 cut(s)	1469
BamHI	GGATCC	1 cut(s)	1774
BanII	GRGCYC	1 cut(s)	162
Bbv12I	GWGCWC	3 cut(s)	162, 953, 1469
BbvI	GCAGC	9 cut(s)	560, 733, 741, 895, 1046, 1060, 1548, 1674, 1698
BccI	CCATC	4 cut(s)	148, 337, 1122, 1126
BcgI	CGANNNNNNTGC	4 cut(s)	506, 540, 1682, 1716
BciT130I	CCWGG	3 cut(s)	434, 875, 1764
BclI	TGATCA	1 cut(s)	1582
BcoDI	GTCTC	3 cut(s)	255, 839, 1300
BcuI	ACTAGT	1 cut(s)	683
BfaI	CTAG	6 cut(s)	501, 684, 834, 918, 1257, 1779
BfmI	CTRYAG	1 cut(s)	654
BfuAI	ACCTGC	1 cut(s)	1237
BglII	AGATCT	1 cut(s)	137
BlnI	CCTAGG	1 cut(s)	1778
Bme1390I	CCNGG	3 cut(s)	434, 875, 1764
Bme18I	GGWCC	2 cut(s)	1617, 1760
BmeRI	GACNNNNNGTC	1 cut(s)	559
BmeT110I	CYCGRG	1 cut(s)	1691
BmgT120I	GGNCC	2 cut(s)	1617, 1760
BmiI	GGNNCC	5 cut(s)	544, 663, 1137, 1426, 1776
BmrFI	CCNGG	3 cut(s)	434, 875, 1764
BmsI	GCATC	6 cut(s)	560, 1214, 1352, 1561, 1616, 1818
BpmI	CTGGAG	4 cut(s)	41, 276, 948, 1083
BpuEI	CTTGAG	1 cut(s)	942
BsaAI	YACGTR	1 cut(s)	1169
BsaJI	CCNNGG	3 cut(s)	433, 1763, 1778
BsaWI	WCCGGW	1 cut(s)	1080
Bsc4I	CCNNNNNNNGG	8 cut(s)	717, 1030, 1128, 1251, 1262, 1436, 1497, 1666
Bse118I	RCCGGY	1 cut(s)	1598
Bse3DI	GCAATG	2 cut(s)	904, 1208
BseAI	TCCGGA	1 cut(s)	1080
BseBI	CCWGG	3 cut(s)	434, 875, 1764
BseDI	CCNNGG	3 cut(s)	433, 1763, 1778
BseGI	GGATG	3 cut(s)	575, 1137, 1840
BseLI	CCNNNNNNNGG	8 cut(s)	717, 1030, 1128, 1251, 1262, 1436, 1497, 1666
BseMI	GCAATG	2 cut(s)	904, 1208
BseMII	CTCAG	4 cut(s)	748, 834, 1100, 1187
BseRI	GAGGAG	1 cut(s)	273
BseSI	GKGCMC	1 cut(s)	1469
BseXI	GCAGC	9 cut(s)	560, 733, 741, 895, 1046, 1060, 1548, 1674, 1698
BsgI	GTGCAG	2 cut(s)	36, 126
BshFI	GGCC	4 cut(s)	287, 699, 739, 1255
BsiHKAI	GWGCWC	3 cut(s)	162, 953, 1469
BsiHKCI	CYCGRG	1 cut(s)	1691
BsiSI	CCGG	4 cut(s)	1081, 1252, 1599, 1615
BslFI	GGGAC	1 cut(s)	498
BslI	CCNNNNNNNGG	8 cut(s)	717, 1030, 1128, 1251, 1262, 1436, 1497, 1666
BsmAI	GTCTC	3 cut(s)	255, 839, 1300
BsmFI	GGGAC	1 cut(s)	498
BsmI	GAATGC	1 cut(s)	1594
BsnI	GGCC	4 cut(s)	287, 699, 739, 1255
BsoBI	CYCGRG	1 cut(s)	1691
Bsp1286I	GDGCHC	3 cut(s)	162, 953, 1469
Bsp13I	TCCGGA	1 cut(s)	1080
Bsp143I	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
BspACI	CCGC	4 cut(s)	749, 1534, 1596, 1636
BspANI	GGCC	4 cut(s)	287, 699, 739, 1255
BspCNI	CTCAG	4 cut(s)	747, 835, 1099, 1186
BspEI	TCCGGA	1 cut(s)	1080
BspHI	TCATGA	1 cut(s)	1452
BspLI	GGNNCC	5 cut(s)	544, 663, 1137, 1426, 1776
BspMI	ACCTGC	1 cut(s)	1237
BspPI	GGATC	3 cut(s)	1012, 1769, 1782
BspQI	GCTCTTC	1 cut(s)	1725
BsrDI	GCAATG	2 cut(s)	904, 1208
BsrFI	RCCGGY	1 cut(s)	1598
BssAI	RCCGGY	1 cut(s)	1598
BssECI	CCNNGG	3 cut(s)	433, 1763, 1778
BssMI	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
BssT1I	CCWWGG	1 cut(s)	1778
Bst2UI	CCWGG	3 cut(s)	434, 875, 1764
Bst4CI	ACNGT	5 cut(s)	251, 1277, 1445, 1471, 1825
Bst6I	CTCTTC	3 cut(s)	303, 487, 1725
BstBAI	YACGTR	1 cut(s)	1169
BstC8I	GCNNGC	3 cut(s)	115, 1046, 1499
BstDEI	CTNAG	6 cut(s)	734, 843, 1086, 1173, 1502, 1803
BstEII	GGTNACC	1 cut(s)	1439
BstENI	CCTNNNNNAGG	1 cut(s)	1495
BstF5I	GGATG	3 cut(s)	575, 1137, 1840
BstKTI	GATC	7 cut(s)	131, 140, 421, 475, 1007, 1585, 1777
BstMAI	GTCTC	3 cut(s)	255, 839, 1300
BstMBI	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
BstMWI	GCNNNNNNNGC	4 cut(s)	231, 611, 1422, 1604
BstNI	CCWGG	3 cut(s)	434, 875, 1764
BstNSI	RCATGY	2 cut(s)	1543, 1578
BstPI	GGTNACC	1 cut(s)	1439
BstSCI	CCNGG	3 cut(s)	432, 873, 1762
BstSFI	CTRYAG	1 cut(s)	654
BstSLI	GKGCMC	1 cut(s)	1469
BstV1I	GCAGC	9 cut(s)	560, 733, 741, 895, 1046, 1060, 1548, 1674, 1698
BstX2I	RGATCY	2 cut(s)	137, 1774
BstYI	RGATCY	2 cut(s)	137, 1774
BsuRI	GGCC	4 cut(s)	287, 699, 739, 1255
BtgZI	GCGATG	1 cut(s)	1137
BtsCI	GGATG	3 cut(s)	575, 1137, 1840
BtsIMutI	CAGTG	1 cut(s)	1273
BveI	ACCTGC	1 cut(s)	1237
Cac8I	GCNNGC	3 cut(s)	115, 1046, 1499
CciI	TCATGA	1 cut(s)	1452
Cfr10I	RCCGGY	1 cut(s)	1598
Cfr13I	GGNCC	2 cut(s)	1617, 1760
Csp6I	GTAC	3 cut(s)	679, 1170, 1657
CviAII	CATG	8 cut(s)	74, 265, 712, 964, 1453, 1518, 1540, 1575
CviQI	GTAC	3 cut(s)	679, 1170, 1657
DdeI	CTNAG	6 cut(s)	734, 843, 1086, 1173, 1502, 1803
DpnI	GATC	7 cut(s)	130, 139, 420, 474, 1006, 1584, 1776
DpnII	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
DraI	TTTAAA	1 cut(s)	610
DriI	GACNNNNNGTC	1 cut(s)	559
Eam1104I	CTCTTC	3 cut(s)	303, 487, 1725
Eam1105I	GACNNNNNGTC	1 cut(s)	559
EarI	CTCTTC	3 cut(s)	303, 487, 1725
Ecl136II	GAGCTC	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1778
Eco147I	AGGCCT	1 cut(s)	699
Eco24I	GRGCYC	1 cut(s)	162
Eco47I	GGWCC	2 cut(s)	1617, 1760
Eco53kI	GAGCTC	1 cut(s)	160
Eco57I	CTGAAG	4 cut(s)	327, 450, 758, 1692
Eco88I	CYCGRG	1 cut(s)	1691
Eco91I	GGTNACC	1 cut(s)	1439
EcoICRI	GAGCTC	1 cut(s)	160
EcoNI	CCTNNNNNAGG	1 cut(s)	1495
EcoO65I	GGTNACC	1 cut(s)	1439
EcoRI	GAATTC	3 cut(s)	294, 995, 1331
EcoRII	CCWGG	3 cut(s)	432, 873, 1762
EcoT14I	CCWWGG	1 cut(s)	1778
EcoT22I	ATGCAT	2 cut(s)	236, 1576
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	1 cut(s)	1778
FaeI	CATG	8 cut(s)	77, 268, 715, 967, 1456, 1521, 1543, 1578
FaqI	GGGAC	1 cut(s)	498
FatI	CATG	8 cut(s)	73, 264, 711, 963, 1452, 1517, 1539, 1574
FauNDI	CATATG	1 cut(s)	1348
FbaI	TGATCA	1 cut(s)	1582
FokI	GGATG	3 cut(s)	582, 1144, 1847
FriOI	GRGCYC	1 cut(s)	162
FspBI	CTAG	6 cut(s)	501, 684, 834, 918, 1257, 1779
GsuI	CTGGAG	4 cut(s)	41, 276, 948, 1083
HaeIII	GGCC	4 cut(s)	287, 699, 739, 1255
HapII	CCGG	4 cut(s)	1081, 1252, 1599, 1615
Hin1II	CATG	8 cut(s)	77, 268, 715, 967, 1456, 1521, 1543, 1578
HincII	GTYRAC	2 cut(s)	462, 1800
HindII	GTYRAC	2 cut(s)	462, 1800
HindIII	AAGCTT	2 cut(s)	1107, 1674
HinfI	GANTC	8 cut(s)	103, 203, 367, 913, 941, 988, 1084, 1144
HpaI	GTTAAC	1 cut(s)	1800
HpaII	CCGG	4 cut(s)	1081, 1252, 1599, 1615
HphI	GGTGA	6 cut(s)	449, 755, 944, 1012, 1389, 1451
Hpy166II	GTNNAC	4 cut(s)	462, 681, 1467, 1800
Hpy8I	GTNNAC	4 cut(s)	462, 681, 1467, 1800
HpyAV	CCTTC	4 cut(s)	677, 782, 1676, 1762
HpyCH4III	ACNGT	5 cut(s)	251, 1277, 1445, 1471, 1825
HpyCH4IV	ACGT	1 cut(s)	1168
HpyF10VI	GCNNNNNNNGC	4 cut(s)	231, 611, 1422, 1604
HpyF3I	CTNAG	6 cut(s)	734, 843, 1086, 1173, 1502, 1803
HpySE526I	ACGT	1 cut(s)	1168
Hsp92II	CATG	8 cut(s)	77, 268, 715, 967, 1456, 1521, 1543, 1578
Kpn2I	TCCGGA	1 cut(s)	1080
Ksp22I	TGATCA	1 cut(s)	1582
KspAI	GTTAAC	1 cut(s)	1800
Kzo9I	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
LguI	GCTCTTC	1 cut(s)	1725
LmnI	GCTCC	9 cut(s)	4, 22, 157, 667, 751, 762, 1135, 1430, 1604
Lsp1109I	GCAGC	9 cut(s)	560, 733, 741, 895, 1046, 1060, 1548, 1674, 1698
LweI	GCATC	6 cut(s)	560, 1214, 1352, 1561, 1616, 1818
MaeI	CTAG	6 cut(s)	501, 684, 834, 918, 1257, 1779
MaeII	ACGT	1 cut(s)	1168
MaeIII	GTNAC	6 cut(s)	245, 437, 761, 1018, 1186, 1439
MalI	GATC	7 cut(s)	130, 139, 420, 474, 1006, 1584, 1776
MboI	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
MfeI	CAATTG	2 cut(s)	1053, 1358
MflI	RGATCY	2 cut(s)	137, 1774
MhlI	GDGCHC	3 cut(s)	162, 953, 1469
MlyI	GAGTC	1 cut(s)	1078
MmeI	TCCRAC	1 cut(s)	358
MnlI	CCTC	9 cut(s)	251, 490, 689, 923, 1320, 1385, 1501, 1630, 1660
Mph1103I	ATGCAT	2 cut(s)	236, 1576
MroI	TCCGGA	1 cut(s)	1080
MroXI	GAANNNNTTC	1 cut(s)	855
MseI	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1236, 1281, 1799, 1845
MslI	CAYNNNNRTG	2 cut(s)	72, 384
MspI	CCGG	4 cut(s)	1081, 1252, 1599, 1615
MspR9I	CCNGG	3 cut(s)	434, 875, 1764
MunI	CAATTG	2 cut(s)	1053, 1358
Mva1269I	GAATGC	1 cut(s)	1594
MvaI	CCWGG	3 cut(s)	434, 875, 1764
MwoI	GCNNNNNNNGC	4 cut(s)	231, 611, 1422, 1604
NdeI	CATATG	1 cut(s)	1348
NdeII	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
NlaIII	CATG	8 cut(s)	77, 268, 715, 967, 1456, 1521, 1543, 1578
NlaIV	GGNNCC	5 cut(s)	544, 663, 1137, 1426, 1776
NmuCI	GTSAC	4 cut(s)	437, 761, 1018, 1439
NsiI	ATGCAT	2 cut(s)	236, 1576
NspI	RCATGY	2 cut(s)	1543, 1578
PaeR7I	CTCGAG	1 cut(s)	1691
PagI	TCATGA	1 cut(s)	1452
PceI	AGGCCT	1 cut(s)	699
PciSI	GCTCTTC	1 cut(s)	1725
PctI	GAATGC	1 cut(s)	1594
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	7 cut(s)	103, 203, 367, 913, 941, 988, 1144
PflMI	CCANNNNNTGG	2 cut(s)	1128, 1436
PleI	GAGTC	1 cut(s)	1078
PpsI	GAGTC	1 cut(s)	1078
Ppu21I	YACGTR	1 cut(s)	1169
PshBI	ATTAAT	2 cut(s)	645, 1845
Psp124BI	GAGCTC	1 cut(s)	162
Psp6I	CCWGG	3 cut(s)	432, 873, 1762
PspEI	GGTNACC	1 cut(s)	1439
PspGI	CCWGG	3 cut(s)	432, 873, 1762
PspN4I	GGNNCC	5 cut(s)	544, 663, 1137, 1426, 1776
PspPI	GGNCC	2 cut(s)	1617, 1760
PspXI	VCTCGAGB	1 cut(s)	1691
PsuI	RGATCY	2 cut(s)	137, 1774
RsaI	GTAC	3 cut(s)	680, 1171, 1658
RsaNI	GTAC	3 cut(s)	679, 1170, 1657
RseI	CAYNNNNRTG	2 cut(s)	72, 384
SacI	GAGCTC	1 cut(s)	162
SapI	GCTCTTC	1 cut(s)	1725
SaqAI	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1236, 1281, 1799, 1845
Sau3AI	GATC	7 cut(s)	128, 137, 418, 472, 1004, 1582, 1774
Sau96I	GGNCC	2 cut(s)	1617, 1760
SchI	GAGTC	1 cut(s)	1078
ScrFI	CCNGG	3 cut(s)	434, 875, 1764
SduI	GDGCHC	3 cut(s)	162, 953, 1469
SfaNI	GCATC	6 cut(s)	560, 1214, 1352, 1561, 1616, 1818
SfcI	CTRYAG	1 cut(s)	654
Sfr274I	CTCGAG	1 cut(s)	1691
SgrAI	CRCCGGYG	1 cut(s)	1598
SinI	GGWCC	2 cut(s)	1617, 1760
SlaI	CTCGAG	1 cut(s)	1691
SmiMI	CAYNNNNRTG	2 cut(s)	72, 384
SmlI	CTYRAG	2 cut(s)	957, 1691
SmoI	CTYRAG	2 cut(s)	957, 1691
SpeI	ACTAGT	1 cut(s)	683
SseBI	AGGCCT	1 cut(s)	699
SsiI	CCGC	4 cut(s)	749, 1534, 1596, 1636
SspMI	CTAG	6 cut(s)	501, 684, 834, 918, 1257, 1779
SstI	GAGCTC	1 cut(s)	162
StuI	AGGCCT	1 cut(s)	699
StyD4I	CCNGG	3 cut(s)	432, 873, 1762
StyI	CCWWGG	1 cut(s)	1778
TaaI	ACNGT	5 cut(s)	251, 1277, 1445, 1471, 1825
TaiI	ACGT	1 cut(s)	1171
TaqI	TCGA	8 cut(s)	213, 351, 694, 859, 1312, 1564, 1610, 1692
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	1 cut(s)	1638
TfiI	GAWTC	7 cut(s)	103, 203, 367, 913, 941, 988, 1144
Tru1I	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1236, 1281, 1799, 1845
Tru9I	TTAA	9 cut(s)	410, 609, 645, 705, 893, 1236, 1281, 1799, 1845
TscAI	CASTG	1 cut(s)	1280
TseFI	GTSAC	4 cut(s)	437, 761, 1018, 1439
TseI	GCWGC	9 cut(s)	573, 746, 754, 883, 1034, 1048, 1536, 1687, 1711
Tsp45I	GTSAC	4 cut(s)	437, 761, 1018, 1439
TspDTI	ATGAA	9 cut(s)	90, 368, 597, 785, 980, 1365, 1380, 1469, 1743
TspGWI	ACGGA	2 cut(s)	148, 749
TspRI	CASTG	1 cut(s)	1280
Van91I	CCANNNNNTGG	2 cut(s)	1128, 1436
VneI	GTGCAC	1 cut(s)	1465
VpaK11BI	GGWCC	2 cut(s)	1617, 1760
VspI	ATTAAT	2 cut(s)	645, 1845
XagI	CCTNNNNNAGG	1 cut(s)	1495
XapI	RAATTY	5 cut(s)	15, 170, 294, 995, 1331
XceI	RCATGY	2 cut(s)	1543, 1578
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1129
XhoI	CTCGAG	1 cut(s)	1691
XmaJI	CCTAGG	1 cut(s)	1778
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	6 cut(s)	501, 684, 834, 918, 1257, 1779
Zsp2I	ATGCAT	2 cut(s)	236, 1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.