Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0011661

Physical Location & Seq

Genomic Coordinates Reverse (-)

2482777 .. 2486741

Gene Structure 3965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G002800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGAGCAATACGAAGTTCTGGAGCAAATTGGGAAAGGGGCTTTCGGTTCTGCACTTCTTGTCAGGCACAAGCACGAAAAGAAGAAGTATGTGCTCAAAAAGATTCGTCTTGCTCGCCAGACTGATAGATCACGGAGATCTGCACATCAGGAGATGGAGCTCATTTCTAAATTCAAAAATCCATTTATTGTGGAGTATAAAGATTCTTGGGTCGAAAAGGGTTGCTATGTATGCATTGTTATAGGTTACTGTGCTGGAGGAGACATGGCAGAAGCTATAAAAAAGGCCAATGGAATTCTTTTTCCTGAAGAGAAAATCTGTAAGTGGCTTGTCCAACTTCTGATGGCACTCGACTATTTGCACAAGAATCATATTCTTCATCGTGATGTCAAGTGTTCTAATATCTTCTTAACAAAAGATCAAGATATACGCCTGGGTGACTTTGGACTTGCAAAAATGTTGACTTCAGATGATCTTGCCTCTTCTGTTGTGGGAACTCCTAGCTATATGTGTCCTGAACTTCTTGCTGATATACCTTATGGTTCCAAATCAGACATTTGGTCTTTGGGATGCTGCATATATGAAATGACTTCTCATAGACCAGCATTTAAAGCATTTGATATACAAGCACTTATTACCAAAATTAATAAGTCTATAGTGGCTCCCCTTCCCACAAAGTACACTAGTGCATTTCGAGGCCTTGTTAAAACCATGCTTCGGAAAAACCCAGGAACTCAGGCCAAGTGTATGTATACTTCTTCTAGCTTACATCTTGCAAAATGGATGTGGATAGCTGCGGAGCTGCTCCGTCACCCATACCTTCAGCCTTATGTTCAAAAGGTTCATCTCAAAATCAACAGCCCCAATTACTTGAAGAAAACTAGATTTTCTGAGACAGAAGATGTTCGATACTCAACATACCAGGAGAAGCAGCGTATATTAAGCAATGATAGGACTTTGAATCCTAGTATTTCTGGAGGTGAGCAAGATTCTATGTGCTCTACTCAAGACATGAATGACAAGTTCAATTATCTGAATCAAGAATTGACAGGATCATCTGTTGGTGTCACCCATAAAAAGGCAGCCATTCGCAAGCAGCCAATTGCTTCCAAAACATCAAATAATGTCCGGACTCAGAAAATTACTCCAGCAAAAGCTTCTGCCACTCCCAAGAGATGGATGGAGCCAAAGAATCGCTCATCGCTTCCTGTTTCACGCACTCAGGACAAAGCAGTAACTACAACTCGCAGAGCATCATTGCCATTCTCAACAAGACCTGCAATTAAACAATCCCCTTTCCGGCCTAGTGTTGGTGTCCTACACTGTATTAAATCTCCTGATGTCTCTGTCAATTCCCCTCGAATTGACAGGATAGCTGAATTCCCATTAGCATCATATGAAGAACAATTGTATGAAGAACAATTTTTGCCTACCCGTAGAGGCTCACCAATCTCTGTGCAAGGCTCATCTGGCTCCCCACAATCTGGTGACCGTTCAATCATGAAAGACAAGTGCACAGTTCAGATATTTGATAAAGCCTCTCGCAGGCTTAGTTTCACAGGTGCATGGCAGGGAATTGACCGCAGCATGTTTCAAGTTGATAGAGAAAATCGAAGTGATGCATGTTCTGATCAGAATGCAACCGCCGGTGGAGCATCGAGCCGGACCTCATCAGACATACGCCGCCGATTTGACACCTCATCGTACCAGCAAAGGGCTGAAGCTTTGGAAGGGTTGCTCGAGTTTAGTGCAAGGTTGCTGCAATATGAAAGATATGAAGAGCTTGGGGTGTTGCTAAAACCTTTTGGTCCTGGGAAGGTGGATCCTAGGGAAACTGCTATTTGGTTAACTAAGAGCATCAAGGAAAATACTGTCAAACAGGATGATGAGATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

632

Amino Acids

71.54

Weight (kDa)

9.47

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 246	2e-59	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 244	8.9e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011661)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300 FvH4_6g03300
rosa_chinensis	RchiOBHm_Chr3g0451761
rosa_laevigata	RLG00000025651
rosa_multiflora	Rmu_sc0006510.1_g000022
rosa_roxburghii	Rroxscaffold_164G00436330 Rroxscaffold_6G00428960
rosa_rugosa	Rorug02G0635700 Rorug02G0635800 Rorug02G0635900 Rorug02G0636000
rosa_samantha	Rh3AG037600 Rh3BG038700 Rh3CG037200 Rh3DG037900
rosa_wichuraiana	Rw3G002800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1285
AccB7I	CCANNNNNTGG	2 cut(s)	1176, 1484
AccI	GTMKAC	1 cut(s)	752
AccIII	TCCGGA	1 cut(s)	1128
AciI	CCGC	4 cut(s)	797, 1582, 1644, 1684
AclWI	GGATC	3 cut(s)	1060, 1817, 1830
AcsI	RAATTY	3 cut(s)	170, 294, 1379
AcuI	CTGAAG	4 cut(s)	327, 450, 806, 1740
AfaI	GTAC	2 cut(s)	680, 1706
AfiI	CCNNNNNNNGG	8 cut(s)	717, 1078, 1176, 1299, 1310, 1484, 1545, 1714
AgsI	TTSAA	7 cut(s)	175, 836, 874, 961, 1027, 1497, 1595
AhdI	GACNNNNNGTC	1 cut(s)	559
AhlI	ACTAGT	1 cut(s)	683
AjnI	CCWGG	4 cut(s)	432, 727, 921, 1810
Alw21I	GWGCWC	4 cut(s)	96, 162, 1001, 1517
Alw26I	GTCTC	3 cut(s)	255, 887, 1348
Alw44I	GTGCAC	1 cut(s)	1513
AlwI	GGATC	3 cut(s)	1060, 1817, 1830
Ama87I	CYCGRG	1 cut(s)	1739
Aor13HI	TCCGGA	1 cut(s)	1128
AoxI	GGCC	4 cut(s)	285, 697, 738, 1301
ApaLI	GTGCAC	1 cut(s)	1513
ApeKI	GCWGC	8 cut(s)	573, 794, 802, 931, 1082, 1096, 1584, 1759
ApoI	RAATTY	3 cut(s)	170, 294, 1379
AseI	ATTAAT	2 cut(s)	645, 1893
Asp700I	GAANNNNTTC	1 cut(s)	903
AspA2I	CCTAGG	1 cut(s)	1826
AspS9I	GGNCC	2 cut(s)	1665, 1808
AsuHPI	GGTGA	6 cut(s)	449, 803, 992, 1060, 1437, 1499
AvaI	CYCGRG	1 cut(s)	1739
AvaII	GGWCC	2 cut(s)	1665, 1808
AvrII	CCTAGG	1 cut(s)	1826
BaeGI	GKGCMC	1 cut(s)	1517
BamHI	GGATCC	1 cut(s)	1822
BanII	GRGCYC	1 cut(s)	162
BarI	GAAGNNNNNNTAC	2 cut(s)	739, 771
Bbv12I	GWGCWC	4 cut(s)	96, 162, 1001, 1517
BbvI	GCAGC	8 cut(s)	560, 781, 789, 943, 1094, 1108, 1596, 1746
BccI	CCATC	4 cut(s)	148, 337, 1170, 1174
BcgI	CGANNNNNNTGC	2 cut(s)	1730, 1764
BciT130I	CCWGG	4 cut(s)	434, 729, 923, 1812
BclI	TGATCA	1 cut(s)	1630
BcoDI	GTCTC	3 cut(s)	255, 887, 1348
BcuI	ACTAGT	1 cut(s)	683
BfaI	CTAG	7 cut(s)	501, 684, 762, 882, 966, 1305, 1827
BfmI	CTRYAG	1 cut(s)	654
BfuAI	ACCTGC	1 cut(s)	1285
BglII	AGATCT	1 cut(s)	137
BisI	GCNGC	9 cut(s)	574, 795, 803, 932, 1083, 1097, 1585, 1684, 1760
BlnI	CCTAGG	1 cut(s)	1826
BlsI	GCNGC	9 cut(s)	575, 796, 804, 933, 1084, 1098, 1586, 1685, 1761
Bme1390I	CCNGG	4 cut(s)	434, 729, 923, 1812
Bme18I	GGWCC	2 cut(s)	1665, 1808
BmeRI	GACNNNNNGTC	1 cut(s)	559
BmeT110I	CYCGRG	1 cut(s)	1739
BmgT120I	GGNCC	2 cut(s)	1665, 1808
BmiI	GGNNCC	5 cut(s)	544, 663, 1185, 1474, 1824
BmrFI	CCNGG	4 cut(s)	434, 729, 923, 1812
BmsI	GCATC	6 cut(s)	560, 1262, 1400, 1609, 1664, 1866
BpmI	CTGGAG	4 cut(s)	41, 276, 996, 1131
BpuEI	CTTGAG	1 cut(s)	990
BsaJI	CCNNGG	4 cut(s)	433, 727, 1811, 1826
BsaWI	WCCGGW	1 cut(s)	1128
Bsc4I	CCNNNNNNNGG	8 cut(s)	717, 1078, 1176, 1299, 1310, 1484, 1545, 1714
Bse118I	RCCGGY	1 cut(s)	1646
Bse3DI	GCAATG	2 cut(s)	952, 1256
BseAI	TCCGGA	1 cut(s)	1128
BseBI	CCWGG	4 cut(s)	434, 729, 923, 1812
BseDI	CCNNGG	4 cut(s)	433, 727, 1811, 1826
BseGI	GGATG	4 cut(s)	575, 789, 1185, 1888
BseLI	CCNNNNNNNGG	8 cut(s)	717, 1078, 1176, 1299, 1310, 1484, 1545, 1714
BseMI	GCAATG	2 cut(s)	952, 1256
BseMII	CTCAG	4 cut(s)	749, 882, 1148, 1235
BseRI	GAGGAG	1 cut(s)	273
BseSI	GKGCMC	1 cut(s)	1517
BseXI	GCAGC	8 cut(s)	560, 781, 789, 943, 1094, 1108, 1596, 1746
BsgI	GTGCAG	2 cut(s)	36, 126
BshFI	GGCC	4 cut(s)	287, 699, 740, 1303
BsiHKAI	GWGCWC	4 cut(s)	96, 162, 1001, 1517
BsiHKCI	CYCGRG	1 cut(s)	1739
BsiSI	CCGG	4 cut(s)	1129, 1300, 1647, 1663
BslI	CCNNNNNNNGG	8 cut(s)	717, 1078, 1176, 1299, 1310, 1484, 1545, 1714
BsmAI	GTCTC	3 cut(s)	255, 887, 1348
BsmI	GAATGC	1 cut(s)	1642
BsnI	GGCC	4 cut(s)	287, 699, 740, 1303
BsoBI	CYCGRG	1 cut(s)	1739
Bsp1286I	GDGCHC	4 cut(s)	96, 162, 1001, 1517
Bsp13I	TCCGGA	1 cut(s)	1128
Bsp143I	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
BspACI	CCGC	4 cut(s)	797, 1582, 1644, 1684
BspANI	GGCC	4 cut(s)	287, 699, 740, 1303
BspCNI	CTCAG	4 cut(s)	748, 883, 1147, 1234
BspEI	TCCGGA	1 cut(s)	1128
BspHI	TCATGA	1 cut(s)	1500
BspLI	GGNNCC	5 cut(s)	544, 663, 1185, 1474, 1824
BspMI	ACCTGC	1 cut(s)	1285
BspPI	GGATC	3 cut(s)	1060, 1817, 1830
BspQI	GCTCTTC	1 cut(s)	1773
BsrDI	GCAATG	2 cut(s)	952, 1256
BsrFI	RCCGGY	1 cut(s)	1646
BssAI	RCCGGY	1 cut(s)	1646
BssECI	CCNNGG	4 cut(s)	433, 727, 1811, 1826
BssMI	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
BssNAI	GTATAC	1 cut(s)	753
BssT1I	CCWWGG	1 cut(s)	1826
Bst1107I	GTATAC	1 cut(s)	753
Bst2UI	CCWGG	4 cut(s)	434, 729, 923, 1812
Bst4CI	ACNGT	5 cut(s)	251, 1325, 1493, 1519, 1873
Bst6I	CTCTTC	3 cut(s)	303, 487, 1773
BstC8I	GCNNGC	3 cut(s)	115, 1094, 1547
BstDEI	CTNAG	6 cut(s)	735, 891, 1134, 1221, 1550, 1851
BstEII	GGTNACC	1 cut(s)	1487
BstENI	CCTNNNNNAGG	1 cut(s)	1543
BstF5I	GGATG	4 cut(s)	575, 789, 1185, 1888
BstKTI	GATC	7 cut(s)	131, 140, 421, 475, 1055, 1633, 1825
BstMAI	GTCTC	3 cut(s)	255, 887, 1348
BstMBI	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
BstMWI	GCNNNNNNNGC	4 cut(s)	231, 611, 1470, 1652
BstNI	CCWGG	4 cut(s)	434, 729, 923, 1812
BstNSI	RCATGY	2 cut(s)	1591, 1626
BstPI	GGTNACC	1 cut(s)	1487
BstSCI	CCNGG	4 cut(s)	432, 727, 921, 1810
BstSFI	CTRYAG	1 cut(s)	654
BstSLI	GKGCMC	1 cut(s)	1517
BstV1I	GCAGC	8 cut(s)	560, 781, 789, 943, 1094, 1108, 1596, 1746
BstX2I	RGATCY	2 cut(s)	137, 1822
BstYI	RGATCY	2 cut(s)	137, 1822
BstZ17I	GTATAC	1 cut(s)	753
BsuRI	GGCC	4 cut(s)	287, 699, 740, 1303
BtgZI	GCGATG	1 cut(s)	1185
BtsCI	GGATG	4 cut(s)	575, 789, 1185, 1888
BtsIMutI	CAGTG	1 cut(s)	1321
BveI	ACCTGC	1 cut(s)	1285
Cac8I	GCNNGC	3 cut(s)	115, 1094, 1547
CciI	TCATGA	1 cut(s)	1500
Cfr10I	RCCGGY	1 cut(s)	1646
Cfr13I	GGNCC	2 cut(s)	1665, 1808
Csp6I	GTAC	2 cut(s)	679, 1705
CviAII	CATG	7 cut(s)	265, 712, 1012, 1501, 1566, 1588, 1623
CviQI	GTAC	2 cut(s)	679, 1705
DdeI	CTNAG	6 cut(s)	735, 891, 1134, 1221, 1550, 1851
DpnI	GATC	7 cut(s)	130, 139, 420, 474, 1054, 1632, 1824
DpnII	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
DraI	TTTAAA	1 cut(s)	610
DriI	GACNNNNNGTC	1 cut(s)	559
Eam1104I	CTCTTC	3 cut(s)	303, 487, 1773
Eam1105I	GACNNNNNGTC	1 cut(s)	559
EarI	CTCTTC	3 cut(s)	303, 487, 1773
Ecl136II	GAGCTC	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1826
Eco147I	AGGCCT	1 cut(s)	699
Eco24I	GRGCYC	1 cut(s)	162
Eco47I	GGWCC	2 cut(s)	1665, 1808
Eco53kI	GAGCTC	1 cut(s)	160
Eco57I	CTGAAG	4 cut(s)	327, 450, 806, 1740
Eco88I	CYCGRG	1 cut(s)	1739
Eco91I	GGTNACC	1 cut(s)	1487
EcoICRI	GAGCTC	1 cut(s)	160
EcoNI	CCTNNNNNAGG	1 cut(s)	1543
EcoO65I	GGTNACC	1 cut(s)	1487
EcoRI	GAATTC	2 cut(s)	294, 1379
EcoRII	CCWGG	4 cut(s)	432, 727, 921, 1810
EcoT14I	CCWWGG	1 cut(s)	1826
EcoT22I	ATGCAT	2 cut(s)	236, 1624
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	1 cut(s)	1826
FaeI	CATG	7 cut(s)	268, 715, 1015, 1504, 1569, 1591, 1626
FatI	CATG	7 cut(s)	264, 711, 1011, 1500, 1565, 1587, 1622
FauNDI	CATATG	1 cut(s)	1396
FbaI	TGATCA	1 cut(s)	1630
FblI	GTMKAC	1 cut(s)	752
Fnu4HI	GCNGC	9 cut(s)	574, 795, 803, 932, 1083, 1097, 1585, 1684, 1760
FokI	GGATG	4 cut(s)	582, 796, 1192, 1895
FriOI	GRGCYC	1 cut(s)	162
Fsp4HI	GCNGC	9 cut(s)	574, 795, 803, 932, 1083, 1097, 1585, 1684, 1760
FspBI	CTAG	7 cut(s)	501, 684, 762, 882, 966, 1305, 1827
GluI	GCNGC	9 cut(s)	574, 795, 803, 932, 1083, 1097, 1585, 1684, 1760
GsuI	CTGGAG	4 cut(s)	41, 276, 996, 1131
HaeIII	GGCC	4 cut(s)	287, 699, 740, 1303
HapII	CCGG	4 cut(s)	1129, 1300, 1647, 1663
Hin1II	CATG	7 cut(s)	268, 715, 1015, 1504, 1569, 1591, 1626
HincII	GTYRAC	2 cut(s)	462, 1848
HindII	GTYRAC	2 cut(s)	462, 1848
HindIII	AAGCTT	2 cut(s)	1155, 1722
HinfI	GANTC	8 cut(s)	103, 203, 367, 961, 989, 1036, 1132, 1192
HpaI	GTTAAC	1 cut(s)	1848
HpaII	CCGG	4 cut(s)	1129, 1300, 1647, 1663
HphI	GGTGA	6 cut(s)	449, 803, 992, 1060, 1437, 1499
Hpy166II	GTNNAC	5 cut(s)	462, 681, 753, 1515, 1848
Hpy8I	GTNNAC	5 cut(s)	462, 681, 753, 1515, 1848
HpyAV	CCTTC	4 cut(s)	677, 830, 1724, 1810
HpyCH4III	ACNGT	5 cut(s)	251, 1325, 1493, 1519, 1873
HpyF10VI	GCNNNNNNNGC	4 cut(s)	231, 611, 1470, 1652
HpyF3I	CTNAG	6 cut(s)	735, 891, 1134, 1221, 1550, 1851
Hsp92II	CATG	7 cut(s)	268, 715, 1015, 1504, 1569, 1591, 1626
Kpn2I	TCCGGA	1 cut(s)	1128
Ksp22I	TGATCA	1 cut(s)	1630
KspAI	GTTAAC	1 cut(s)	1848
Kzo9I	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
LguI	GCTCTTC	1 cut(s)	1773
LmnI	GCTCC	9 cut(s)	4, 22, 157, 667, 799, 810, 1183, 1478, 1652
Lsp1109I	GCAGC	8 cut(s)	560, 781, 789, 943, 1094, 1108, 1596, 1746
LweI	GCATC	6 cut(s)	560, 1262, 1400, 1609, 1664, 1866
MaeI	CTAG	7 cut(s)	501, 684, 762, 882, 966, 1305, 1827
MaeIII	GTNAC	6 cut(s)	245, 437, 809, 1066, 1234, 1487
MalI	GATC	7 cut(s)	130, 139, 420, 474, 1054, 1632, 1824
MboI	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
MfeI	CAATTG	2 cut(s)	1101, 1406
MflI	RGATCY	2 cut(s)	137, 1822
MhlI	GDGCHC	4 cut(s)	96, 162, 1001, 1517
MlyI	GAGTC	1 cut(s)	1126
MmeI	TCCRAC	1 cut(s)	358
MnlI	CCTC	9 cut(s)	251, 490, 689, 971, 1368, 1433, 1549, 1678, 1708
Mph1103I	ATGCAT	2 cut(s)	236, 1624
MroI	TCCGGA	1 cut(s)	1128
MroXI	GAANNNNTTC	1 cut(s)	903
MseI	TTAA	9 cut(s)	410, 609, 645, 705, 941, 1284, 1329, 1847, 1893
MslI	CAYNNNNRTG	1 cut(s)	384
MspI	CCGG	4 cut(s)	1129, 1300, 1647, 1663
MspR9I	CCNGG	4 cut(s)	434, 729, 923, 1812
MunI	CAATTG	2 cut(s)	1101, 1406
Mva1269I	GAATGC	1 cut(s)	1642
MvaI	CCWGG	4 cut(s)	434, 729, 923, 1812
MwoI	GCNNNNNNNGC	4 cut(s)	231, 611, 1470, 1652
NdeI	CATATG	1 cut(s)	1396
NdeII	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
NlaIII	CATG	7 cut(s)	268, 715, 1015, 1504, 1569, 1591, 1626
NlaIV	GGNNCC	5 cut(s)	544, 663, 1185, 1474, 1824
NmuCI	GTSAC	4 cut(s)	437, 809, 1066, 1487
NsiI	ATGCAT	2 cut(s)	236, 1624
NspI	RCATGY	2 cut(s)	1591, 1626
PaeR7I	CTCGAG	1 cut(s)	1739
PagI	TCATGA	1 cut(s)	1500
PceI	AGGCCT	1 cut(s)	699
PciSI	GCTCTTC	1 cut(s)	1773
PctI	GAATGC	1 cut(s)	1642
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	7 cut(s)	103, 203, 367, 961, 989, 1036, 1192
PflMI	CCANNNNNTGG	2 cut(s)	1176, 1484
PkrI	GCNGC	9 cut(s)	575, 796, 804, 933, 1084, 1098, 1586, 1685, 1761
PleI	GAGTC	1 cut(s)	1126
PpsI	GAGTC	1 cut(s)	1126
PshBI	ATTAAT	2 cut(s)	645, 1893
Psp124BI	GAGCTC	1 cut(s)	162
Psp6I	CCWGG	4 cut(s)	432, 727, 921, 1810
PspEI	GGTNACC	1 cut(s)	1487
PspGI	CCWGG	4 cut(s)	432, 727, 921, 1810
PspN4I	GGNNCC	5 cut(s)	544, 663, 1185, 1474, 1824
PspPI	GGNCC	2 cut(s)	1665, 1808
PspXI	VCTCGAGB	1 cut(s)	1739
PsuI	RGATCY	2 cut(s)	137, 1822
RsaI	GTAC	2 cut(s)	680, 1706
RsaNI	GTAC	2 cut(s)	679, 1705
RseI	CAYNNNNRTG	1 cut(s)	384
SacI	GAGCTC	1 cut(s)	162
SapI	GCTCTTC	1 cut(s)	1773
SaqAI	TTAA	9 cut(s)	410, 609, 645, 705, 941, 1284, 1329, 1847, 1893
SatI	GCNGC	9 cut(s)	574, 795, 803, 932, 1083, 1097, 1585, 1684, 1760
Sau3AI	GATC	7 cut(s)	128, 137, 418, 472, 1052, 1630, 1822
Sau96I	GGNCC	2 cut(s)	1665, 1808
SchI	GAGTC	1 cut(s)	1126
ScrFI	CCNGG	4 cut(s)	434, 729, 923, 1812
SduI	GDGCHC	4 cut(s)	96, 162, 1001, 1517
SfaNI	GCATC	6 cut(s)	560, 1262, 1400, 1609, 1664, 1866
SfcI	CTRYAG	1 cut(s)	654
Sfr274I	CTCGAG	1 cut(s)	1739
SgrAI	CRCCGGYG	1 cut(s)	1646
SinI	GGWCC	2 cut(s)	1665, 1808
SlaI	CTCGAG	1 cut(s)	1739
SmiMI	CAYNNNNRTG	1 cut(s)	384
SmlI	CTYRAG	2 cut(s)	1005, 1739
SmoI	CTYRAG	2 cut(s)	1005, 1739
SpeI	ACTAGT	1 cut(s)	683
SseBI	AGGCCT	1 cut(s)	699
SsiI	CCGC	4 cut(s)	797, 1582, 1644, 1684
SspMI	CTAG	7 cut(s)	501, 684, 762, 882, 966, 1305, 1827
SstI	GAGCTC	1 cut(s)	162
StuI	AGGCCT	1 cut(s)	699
StyD4I	CCNGG	4 cut(s)	432, 727, 921, 1810
StyI	CCWWGG	1 cut(s)	1826
TaaI	ACNGT	5 cut(s)	251, 1325, 1493, 1519, 1873
TaqI	TCGA	8 cut(s)	213, 351, 694, 907, 1360, 1612, 1658, 1740
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	1 cut(s)	1686
TfiI	GAWTC	7 cut(s)	103, 203, 367, 961, 989, 1036, 1192
Tru1I	TTAA	9 cut(s)	410, 609, 645, 705, 941, 1284, 1329, 1847, 1893
Tru9I	TTAA	9 cut(s)	410, 609, 645, 705, 941, 1284, 1329, 1847, 1893
TscAI	CASTG	1 cut(s)	1328
TseFI	GTSAC	4 cut(s)	437, 809, 1066, 1487
TseI	GCWGC	8 cut(s)	573, 794, 802, 931, 1082, 1096, 1584, 1759
Tsp45I	GTSAC	4 cut(s)	437, 809, 1066, 1487
TspDTI	ATGAA	9 cut(s)	368, 597, 833, 1028, 1413, 1428, 1517, 1782, 1791
TspGWI	ACGGA	2 cut(s)	148, 797
TspRI	CASTG	1 cut(s)	1328
Van91I	CCANNNNNTGG	2 cut(s)	1176, 1484
VneI	GTGCAC	1 cut(s)	1513
VpaK11BI	GGWCC	2 cut(s)	1665, 1808
VspI	ATTAAT	2 cut(s)	645, 1893
XagI	CCTNNNNNAGG	1 cut(s)	1543
XapI	RAATTY	3 cut(s)	170, 294, 1379
XceI	RCATGY	2 cut(s)	1591, 1626
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1177
XhoI	CTCGAG	1 cut(s)	1739
XmaJI	CCTAGG	1 cut(s)	1826
XmiI	GTMKAC	1 cut(s)	752
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	7 cut(s)	501, 684, 762, 882, 966, 1305, 1827
Zsp2I	ATGCAT	2 cut(s)	236, 1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.