Rh3AG066600

Removes the phosphate from trehalose 6-phosphate to produce free trehalose

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
4648687 .. 4653697
5011 bp
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UTR
Exon/CDS
Intron
Rh3AG066600.1

Sequence Viewer

Length: 372 bp
ATGGATTTATCTACCATGGGAGACACCACTCTAAGCTTTTCAGGTTTATTTGAAGATTTTAATGAAATCGGTAAAATGAGAAAGCCACTCAAGGAGGAGTGTTTTTCACCAATGGTTTTATCAGCTCCAACAGTGGCAAGCAGTGAAGTGGTGCTTTCCCCCACTGTAAGGTGGTATGGAACTTTGGATGTATCACACTTGATGTGCGGCACCAAAGAAAGCAAGAAACTGCAGCATCCATCTGCCTTGGACATGTTTGAGCAAATCATTGGAGCTTCCCAAGGCAAGCAAATAGTCATGTTTCTTGACTACGATGGCACTCTTTCGCCCATAGTCGAAGCCCAGATCGAGCTTTCATGTCTGATTCTATGA

Protein Analysis

123

Amino Acids

13.55

Weight (kDa)

4.63

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018173)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 209
AciI CCGC 1 cut(s) 207
AfiI CCNNNNNNNGG 1 cut(s) 168
AflIII ACRYGT 1 cut(s) 252
AgsI TTSAA 1 cut(s) 53
AluBI AGCT 4 cut(s) 36, 125, 275, 352
AluI AGCT 4 cut(s) 36, 125, 275, 352
Alw26I GTCTC 1 cut(s) 15
ApeKI GCWGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 99
BanI GGYRCC 1 cut(s) 209
BbvI GCAGC 1 cut(s) 244
BccI CCATC 2 cut(s) 247, 308
BcoDI GTCTC 1 cut(s) 15
BfmI CTRYAG 1 cut(s) 230
BisI GCNGC 2 cut(s) 208, 233
BlsI GCNGC 2 cut(s) 209, 234
BmiI GGNNCC 1 cut(s) 211
BmsI GCATC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 74
BsaJI CCNNGG 3 cut(s) 15, 246, 280
Bsc4I CCNNNNNNNGG 1 cut(s) 168
BseDI CCNNGG 3 cut(s) 15, 246, 280
BseGI GGATG 2 cut(s) 193, 235
BseLI CCNNNNNNNGG 1 cut(s) 168
BseRI GAGGAG 1 cut(s) 110
BseXI GCAGC 1 cut(s) 244
BshNI GGYRCC 1 cut(s) 209
BslI CCNNNNNNNGG 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 15
Bsp143I GATC 1 cut(s) 345
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 1 cut(s) 207
BspLI GGNNCC 1 cut(s) 211
BspMAI CTGCAG 1 cut(s) 234
BspT107I GGYRCC 1 cut(s) 209
BssECI CCNNGG 3 cut(s) 15, 246, 280
BssMI GATC 1 cut(s) 345
BssT1I CCWWGG 3 cut(s) 15, 246, 280
Bst4CI ACNGT 2 cut(s) 133, 166
BstC8I GCNNGC 2 cut(s) 139, 287
BstDEI CTNAG 1 cut(s) 32
BstDSI CCRYGG 1 cut(s) 15
BstF5I GGATG 2 cut(s) 193, 235
BstKTI GATC 1 cut(s) 348
BstMAI GTCTC 1 cut(s) 15
BstMBI GATC 1 cut(s) 345
BstNSI RCATGY 1 cut(s) 256
BstSFI CTRYAG 1 cut(s) 230
BstV1I GCAGC 1 cut(s) 244
BtgI CCRYGG 1 cut(s) 15
BtsCI GGATG 2 cut(s) 193, 235
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 3 cut(s) 138, 148, 162
Cac8I GCNNGC 2 cut(s) 139, 287
CviAII CATG 4 cut(s) 16, 253, 298, 357
CviJI RGCY 6 cut(s) 36, 85, 125, 275, 341, 352
CviKI_1 RGCY 6 cut(s) 36, 85, 125, 275, 341, 352
DdeI CTNAG 1 cut(s) 32
DpnI GATC 1 cut(s) 347
DpnII GATC 1 cut(s) 345
Eco130I CCWWGG 3 cut(s) 15, 246, 280
EcoT14I CCWWGG 3 cut(s) 15, 246, 280
ErhI CCWWGG 3 cut(s) 15, 246, 280
FaeI CATG 4 cut(s) 19, 256, 301, 360
FaiI YATR 7 cut(s) 17, 177, 254, 299, 332, 358, 370
FalI AAGNNNNNCTT 2 cut(s) 138, 170
FatI CATG 4 cut(s) 15, 252, 297, 356
Fnu4HI GCNGC 2 cut(s) 208, 233
FokI GGATG 2 cut(s) 200, 222
Fsp4HI GCNGC 2 cut(s) 208, 233
GluI GCNGC 2 cut(s) 208, 233
Hin1II CATG 4 cut(s) 19, 256, 301, 360
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 1 cut(s) 364
HphI GGTGA 1 cut(s) 99
Hpy188I TCNGA 1 cut(s) 363
Hpy188III TCNNGA 1 cut(s) 305
HpyCH4III ACNGT 2 cut(s) 133, 166
HpyCH4V TGCA 1 cut(s) 232
HpyF3I CTNAG 1 cut(s) 32
Hsp92II CATG 4 cut(s) 19, 256, 301, 360
Kzo9I GATC 1 cut(s) 345
LmnI GCTCC 2 cut(s) 130, 272
LpnPI CCDG 2 cut(s) 27, 356
Lsp1109I GCAGC 1 cut(s) 244
LweI GCATC 1 cut(s) 244
MalI GATC 1 cut(s) 347
MboI GATC 1 cut(s) 345
MboII GAAGA 1 cut(s) 65
MmeI TCCRAC 1 cut(s) 152
MnlI CCTC 1 cut(s) 88
MseI TTAA 1 cut(s) 60
NcoI CCATGG 1 cut(s) 15
NdeII GATC 1 cut(s) 345
NlaIII CATG 4 cut(s) 19, 256, 301, 360
NlaIV GGNNCC 1 cut(s) 211
NspI RCATGY 1 cut(s) 256
PciI ACATGT 1 cut(s) 252
PfeI GAWTC 1 cut(s) 364
PkrI GCNGC 2 cut(s) 209, 234
PscI ACATGT 1 cut(s) 252
PspN4I GGNNCC 1 cut(s) 211
PstI CTGCAG 1 cut(s) 234
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 2 cut(s) 208, 233
Sau3AI GATC 1 cut(s) 345
SetI ASST 6 cut(s) 38, 46, 127, 173, 277, 354
SfaNI GCATC 1 cut(s) 244
SfcI CTRYAG 1 cut(s) 230
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SsiI CCGC 1 cut(s) 207
StyI CCWWGG 3 cut(s) 15, 246, 280
TaaI ACNGT 2 cut(s) 133, 166
TaqI TCGA 2 cut(s) 336, 348
TauI GCSGC 1 cut(s) 210
TfiI GAWTC 1 cut(s) 364
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TscAI CASTG 3 cut(s) 138, 148, 169
TseI GCWGC 1 cut(s) 232
TspDTI ATGAA 2 cut(s) 78, 345
TspRI CASTG 3 cut(s) 138, 148, 169
XceI RCATGY 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.