Rh3BG006100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0018050
Physical Location & Seq
Reverse (-)
435679 .. 437865
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG006100.1

Sequence Viewer

Length: 2187 bp
ATGAGACGGGCTTATCTGAGCATCAGTTGCGTCAGCTCTAATTTCGAGTTTCAGAGATTCCAGCACTCTGGTTACCATTCACTCCCTGATATTCGTCATGCCAAGTCGGTCAAGGATGGTTGTTTGCACCATTTGAATGTGGGGAACTATGTTGTTAGTCTGTACATGAAATCTAGAAACTTGGAGTATGCACACAAGCTGTTCGGTGAAATGCCCGAGAGAGATGTCCGGTCATGGACTATACTCATCTCTGGGTTTGCTCGGACTGGAGCTTGTAGAACGGTGCTGGAGCTTTTCAAGGGGATGCAAGCTGAGCGTGTTTGTCCGAACCAATTCACGCTATCGAGTGTTTTGAAGAGTTGTTCTAGTTTAAGCGATTTTCGGATGGGGAAGGGAGTCCACGGATGGATATTGAGAAATGGGATTGAATTGGATGTGGTGTTAGAGAACGCAATGCTTGATGTTTACGTCAAATGTGGGGAGTTGGATTATGCAGAAAGGTTGTTTGAGACTATGAAAGAGAGAGATACAGTTACTTGGAATATAATGATGGGTGCATATATGCATGTTGGGGATATGGAGAAGGCTCTTGAGTTGTTCAGAAGGTTACCCTCCAAAGATGTTGCTAGTTGGAATACAATCGTATACGGATTGATGCAAAACGGGGATGGAAGGTCTGCATTGGAGCTACTTTATGAGATGGTCGAAAATGGAGTTGCATTCGAGGATGTAACTTTCTCTGTAGCTCTCGGTTTGGCTTCATCTTTGTATGTTCTGGAACTCGGGACACAGATTCATGGCTATCTTGTAAGGCGTGGTATTGAAAATGATGGATTTCTCCGAACTTCGTTGATAGATATGTATTGCAAATGTGGGAGAATGGACAAGGCATCACTGATATTCAAAAGAATGCCTCTTAGGGCAAAGTCTAAGTTTACATCTGACGAGATGAAGACTGAAATCGTATCATGGAGTTCAATGGTTTCTGGGTATGTTCGTAACGGTGAGCATGAATATGCTTTGATAACATTCCGTTCTATGCTTCGTGAAAAGATTATGGTGGATAGATTCTCTGTGACCAGTGTTGTTTCTGCATGTGCTAACCTTGGCATTTTGCTTCTGGGTCAAAACATCCATGCAGTCGTTCAGAAAATCGGGTACATATTAGATGTTCATTTAGGTTCCTGCTATATTGATATGTATGCTAAATGTGGGAGTCTAAGTGATGCTTTGATGATTTTTGAACAAACTATTGATCCAAATGTTGTTCTGTGGACTTCAACGATTTCTGCTTGCGCTTTACATGGGCAAGGGAAGGAGGCTATACGACTCTTTGAACTCATGATAAGGGAGGGAACTAAACCGAATGAGGTTACTTTCGTGGTGGTTTTAAATGCTTGCAGCCATGCTGGGCTCATTGAAGAAGGCTTCAAATATTTCAGCTTGATGAAAGAAGTTTATGGCATCAAGCCCGGAACTGAACACTTCACCTGTATGGTTGATCTTTATGGTCGTGCAGGTCGCTTGGAGGAGACTAAGGAGTTCATTCATGCAAACGACATCTCTCACTTGAGTTCAGTTTGGAAGTCATTTCTATCTGCTTGCCGGCTTCATAAAAATTTAGAGCTGGGAAAGTGGGTTTCTGAAAAGCTACTCCAACTCGAACCTTCTGATGAGGGGCCTTATGTTTTGATGTCAAACATTTGTGCTGTGAATCACAGATGGGAAGAAGCAGCTGCAATGAGGAGGTTGATGCAACAGAGAGGAATTAACAAAGTCCCCGGTCAATCTTGGATCCAACTGAAGAATCAAGTCCACTCCTTCGCGATGGGAGACCGGTGTCATCCACATTCCACTCAGATATATTCATACTTGGATGAACTTATTGCAAGACTGAAGGCAATCGGGTATTCAATGGATGCAAAGCTGGTGATGCAGGACGTAGAAGAAGAACAAGGAGAAGTACTTCTTGGTCATCACAGTGAAAAGCTTGCTATTGCCTATGGCATAATTAGCACGGCTTCTGGGATACCTATTCGGATAATGAAGAACCTTAGAGTGTGTAGTGATTGTCACAACTTCATTAAATATACTTCTCAGCTTTTAGATAGGGAAATAATTGTCAGAGACCTTCATCGGTTCCATCATTTTAAGCATGGCAGCTGCTCCTGTGGAGATTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 UPF0016

Protein Analysis

728

Amino Acids

82.69

Weight (kDa)

7.15

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 75 - 122 7.5e-07 PPR repeat family
PPR_2 PF13041 175 - 206 1.1e-06 PPR repeat family
PPR PF01535 178 - 207 6.5e-07 PPR repeat
PPR_2 PF13041 206 - 250 2.9e-07 PPR repeat family
PPR_2 PF13041 321 - 368 6.5e-06 PPR repeat family
PPR_3 PF13812 416 - 467 2.2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 420 - 468 2.8e-11 PPR repeat family
E_motif PF20431 538 - 600 5.5e-16 E motif
Eplus_motif PF20430 605 - 632 1e-06 E+ motif
DYW_deaminase PF14432 636 - 728 3e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g00550
malus_domestica MD12G1260100.v1.1
prunus_persica Prupe.6G360800_v2.0.a1
pyrus_communis pycom12g23820
rosa_chinensis RchiOBHm_Chr3g0447941
rosa_laevigata RLG00000025959
rosa_roxburghii Rroxscaffold_6G00426130
rosa_rugosa Rorug02G0607200
rosa_samantha Rh3BG006100 Rh3DG006700
rosa_wichuraiana Rw3G000510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1508
AccI GTMKAC 1 cut(s) 645
AccII CGCG 1 cut(s) 1826
AclWI GGATC 3 cut(s) 1250, 1789, 1802
AcsI RAATTY 1 cut(s) 1618
AcuI CTGAAG 2 cut(s) 1823, 1916
AfaI GTAC 3 cut(s) 164, 1160, 1965
AgeI ACCGGT 1 cut(s) 1836
AjuI GAANNNNNNNTTGG 2 cut(s) 1953, 1985
Alw26I GTCTC 4 cut(s) 503, 1526, 1827, 2121
AlwI GGATC 3 cut(s) 1250, 1789, 1802
Ama87I CYCGRG 2 cut(s) 215, 782
AoxI GGCC 1 cut(s) 1679
ApeKI GCWGC 5 cut(s) 1401, 1733, 1736, 2160, 2163
ApoI RAATTY 1 cut(s) 1618
AsiGI ACCGGT 1 cut(s) 1836
Asp700I GAANNNNTTC 2 cut(s) 332, 1965
AspLEI GCGC 1 cut(s) 1298
AspS9I GGNCC 1 cut(s) 1679
AsuC2I CCSGG 2 cut(s) 1473, 1782
AsuHPI GGTGA 4 cut(s) 218, 1016, 1480, 1942
AvaI CYCGRG 2 cut(s) 215, 782
BamHI GGATCC 1 cut(s) 1794
BanII GRGCYC 1 cut(s) 1416
BbsI GAAGAC 1 cut(s) 959
BbvI GCAGC 5 cut(s) 1413, 1723, 1745, 2150, 2172
BceAI ACGGC 1 cut(s) 2034
BciVI GTATCC 1 cut(s) 2022
BcnI CCSGG 2 cut(s) 1473, 1782
BcoDI GTCTC 4 cut(s) 503, 1526, 1827, 2121
BfaI CTAG 3 cut(s) 174, 366, 627
BfmI CTRYAG 1 cut(s) 741
BfuAI ACCTGC 1 cut(s) 1508
BfuI GTATCC 1 cut(s) 2022
BisI GCNGC 5 cut(s) 1402, 1734, 1737, 2161, 2164
BlpI GCTNAGC 1 cut(s) 312
BlsI GCNGC 5 cut(s) 1403, 1735, 1738, 2162, 2165
BmcAI AGTACT 1 cut(s) 1965
Bme1390I CCNGG 2 cut(s) 1473, 1782
BmeT110I CYCGRG 2 cut(s) 215, 782
BmgT120I GGNCC 1 cut(s) 1679
BmiI GGNNCC 4 cut(s) 1183, 1680, 1796, 2141
BmrFI CCNGG 2 cut(s) 1473, 1782
BmsI GCATC 9 cut(s) 30, 294, 645, 899, 1216, 1473, 1743, 1909, 1923
BoxI GACNNNNGTC 1 cut(s) 1839
BpiI GAAGAC 1 cut(s) 959
BpmI CTGGAG 2 cut(s) 288, 308
Bpu1102I GCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 611, 1591
BpuMI CCSGG 2 cut(s) 1473, 1782
BsaI GGTCTC 2 cut(s) 1827, 2121
BsaJI CCNNGG 3 cut(s) 400, 1105, 1780
BsaWI WCCGGW 2 cut(s) 228, 1836
BsaXI ACNNNNNCTCC 2 cut(s) 1207, 1237
Bse118I RCCGGY 2 cut(s) 1605, 1836
Bse1I ACTGG 2 cut(s) 271, 1080
Bse3DI GCAATG 2 cut(s) 459, 1746
BseDI CCNNGG 3 cut(s) 400, 1105, 1780
BseMI GCAATG 2 cut(s) 459, 1746
BseMII CTCAG 4 cut(s) 8, 303, 1871, 2111
BseNI ACTGG 2 cut(s) 271, 1080
BseRI GAGGAG 2 cut(s) 1544, 1759
BseXI GCAGC 5 cut(s) 1413, 1723, 1745, 2150, 2172
BseYI CCCAGC 2 cut(s) 1409, 1627
BsgI GTGCAG 1 cut(s) 1536
Bsh1236I CGCG 1 cut(s) 1826
BshFI GGCC 1 cut(s) 1681
BshTI ACCGGT 1 cut(s) 1836
BsiHKCI CYCGRG 2 cut(s) 215, 782
BsiSI CCGG 5 cut(s) 229, 1473, 1606, 1782, 1837
BslFI GGGAC 2 cut(s) 799, 1763
BsmAI GTCTC 4 cut(s) 503, 1526, 1827, 2121
BsmFI GGGAC 2 cut(s) 799, 1763
BsmI GAATGC 2 cut(s) 719, 915
BsnI GGCC 1 cut(s) 1681
Bso31I GGTCTC 2 cut(s) 1827, 2121
BsoBI CYCGRG 2 cut(s) 215, 782
Bsp1286I GDGCHC 1 cut(s) 1416
Bsp1407I TGTACA 1 cut(s) 162
Bsp143I GATC 3 cut(s) 1255, 1501, 1794
Bsp1720I GCTNAGC 1 cut(s) 312
Bsp68I TCGCGA 1 cut(s) 1826
BspANI GGCC 1 cut(s) 1681
BspCNI CTCAG 4 cut(s) 9, 304, 1870, 2110
BspFNI CGCG 1 cut(s) 1826
BspHI TCATGA 1 cut(s) 1341
BspLI GGNNCC 4 cut(s) 1183, 1680, 1796, 2141
BspMI ACCTGC 1 cut(s) 1508
BspPI GGATC 3 cut(s) 1250, 1789, 1802
BspTNI GGTCTC 2 cut(s) 1827, 2121
BsrDI GCAATG 2 cut(s) 459, 1746
BsrFI RCCGGY 2 cut(s) 1605, 1836
BsrGI TGTACA 1 cut(s) 162
BsrI ACTGG 2 cut(s) 271, 1080
BssAI RCCGGY 2 cut(s) 1605, 1836
BssECI CCNNGG 3 cut(s) 400, 1105, 1780
BssMI GATC 3 cut(s) 1255, 1501, 1794
BssNAI GTATAC 1 cut(s) 646
BssT1I CCWWGG 1 cut(s) 1105
Bst1107I GTATAC 1 cut(s) 646
Bst4CI ACNGT 4 cut(s) 283, 532, 1004, 1982
Bst6I CTCTTC 1 cut(s) 350
BstAPI GCANNNNNTGC 1 cut(s) 27
BstAUI TGTACA 1 cut(s) 162
BstC8I GCNNGC 6 cut(s) 309, 1294, 1399, 1603, 1607, 1992
BstDEI CTNAG 9 cut(s) 17, 312, 917, 930, 1220, 1536, 1857, 2054, 2097
BstDSI CCRYGG 1 cut(s) 400
BstEII GGTNACC 2 cut(s) 71, 606
BstFNI CGCG 1 cut(s) 1826
BstHHI GCGC 1 cut(s) 1298
BstKTI GATC 3 cut(s) 1258, 1504, 1797
BstMAI GTCTC 4 cut(s) 503, 1526, 1827, 2121
BstMBI GATC 3 cut(s) 1255, 1501, 1794
BstMWI GCNNNNNNNGC 4 cut(s) 27, 313, 1933, 2013
BstNSI RCATGY 2 cut(s) 569, 1098
BstPAI GACNNNNGTC 1 cut(s) 1839
BstPI GGTNACC 2 cut(s) 71, 606
BstSCI CCNGG 2 cut(s) 1471, 1780
BstSFI CTRYAG 1 cut(s) 741
BstUI CGCG 1 cut(s) 1826
BstV1I GCAGC 5 cut(s) 1413, 1723, 1745, 2150, 2172
BstV2I GAAGAC 1 cut(s) 959
BstX2I RGATCY 1 cut(s) 1794
BstXI CCANNNNNNTGG 1 cut(s) 68
BstYI RGATCY 1 cut(s) 1794
BstZ17I GTATAC 1 cut(s) 646
BsuI GTATCC 1 cut(s) 2022
BsuRI GGCC 1 cut(s) 1681
BtgI CCRYGG 1 cut(s) 400
BtgZI GCGATG 1 cut(s) 1841
BtsIMutI CAGTG 3 cut(s) 893, 1087, 1987
BtuMI TCGCGA 1 cut(s) 1826
BveI ACCTGC 1 cut(s) 1508
Cac8I GCNNGC 6 cut(s) 309, 1294, 1399, 1603, 1607, 1992
CciI TCATGA 1 cut(s) 1341
CfoI GCGC 1 cut(s) 1298
Cfr10I RCCGGY 2 cut(s) 1605, 1836
Cfr13I GGNCC 1 cut(s) 1679
CseI GACGC 1 cut(s) 19
Csp6I GTAC 3 cut(s) 163, 1159, 1964
CspAI ACCGGT 1 cut(s) 1836
CviQI GTAC 3 cut(s) 163, 1159, 1964
DdeI CTNAG 9 cut(s) 17, 312, 917, 930, 1220, 1536, 1857, 2054, 2097
DpnI GATC 3 cut(s) 1257, 1503, 1796
DpnII GATC 3 cut(s) 1255, 1501, 1794
DraI TTTAAA 1 cut(s) 1392
Eam1104I CTCTTC 1 cut(s) 350
EarI CTCTTC 1 cut(s) 350
Eco130I CCWWGG 1 cut(s) 1105
Eco24I GRGCYC 1 cut(s) 1416
Eco31I GGTCTC 2 cut(s) 1827, 2121
Eco57I CTGAAG 2 cut(s) 1823, 1916
Eco88I CYCGRG 2 cut(s) 215, 782
Eco91I GGTNACC 2 cut(s) 71, 606
EcoO109I RGGNCCY 1 cut(s) 1679
EcoO65I GGTNACC 2 cut(s) 71, 606
EcoT14I CCWWGG 1 cut(s) 1105
EcoT22I ATGCAT 1 cut(s) 567
EcoT38I GRGCYC 1 cut(s) 1416
ErhI CCWWGG 1 cut(s) 1105
FalI AAGNNNNNCTT 4 cut(s) 1213, 1245, 1953, 1985
FaqI GGGAC 2 cut(s) 799, 1763
FblI GTMKAC 1 cut(s) 645
Fnu4HI GCNGC 5 cut(s) 1402, 1734, 1737, 2161, 2164
FriOI GRGCYC 1 cut(s) 1416
Fsp4HI GCNGC 5 cut(s) 1402, 1734, 1737, 2161, 2164
FspBI CTAG 3 cut(s) 174, 366, 627
GlaI GCGC 1 cut(s) 1297
GluI GCNGC 5 cut(s) 1402, 1734, 1737, 2161, 2164
GsaI CCCAGC 2 cut(s) 1413, 1631
GsuI CTGGAG 2 cut(s) 288, 308
HaeIII GGCC 1 cut(s) 1681
HapII CCGG 5 cut(s) 229, 1473, 1606, 1782, 1837
HgaI GACGC 1 cut(s) 19
HhaI GCGC 1 cut(s) 1298
Hin6I GCGC 1 cut(s) 1296
HinP1I GCGC 1 cut(s) 1296
HindIII AAGCTT 1 cut(s) 1988
HinfI GANTC 8 cut(s) 57, 396, 793, 1068, 1216, 1329, 1714, 1807
HpaII CCGG 5 cut(s) 229, 1473, 1606, 1782, 1837
HphI GGTGA 4 cut(s) 218, 1016, 1480, 1942
Hpy166II GTNNAC 6 cut(s) 400, 466, 646, 936, 1275, 1816
Hpy188III TCNNGA 7 cut(s) 174, 590, 776, 784, 1046, 1342, 1825
Hpy8I GTNNAC 6 cut(s) 400, 466, 646, 936, 1275, 1816
HpyCH4III ACNGT 4 cut(s) 283, 532, 1004, 1982
HpyCH4IV ACGT 2 cut(s) 468, 1941
HpyF10VI GCNNNNNNNGC 4 cut(s) 27, 313, 1933, 2013
HpyF3I CTNAG 9 cut(s) 17, 312, 917, 930, 1220, 1536, 1857, 2054, 2097
HpySE526I ACGT 2 cut(s) 468, 1941
HspAI GCGC 1 cut(s) 1296
KroI GCCGGC 1 cut(s) 1605
KroNI GCCGGC 1 cut(s) 1607
Kzo9I GATC 3 cut(s) 1255, 1501, 1794
LmnI GCTCC 4 cut(s) 269, 289, 685, 2171
Lsp1109I GCAGC 5 cut(s) 1413, 1723, 1745, 2150, 2172
LweI GCATC 9 cut(s) 30, 294, 645, 899, 1216, 1473, 1743, 1909, 1923
MaeI CTAG 3 cut(s) 174, 366, 627
MaeII ACGT 2 cut(s) 468, 1941
MaeIII GTNAC 8 cut(s) 71, 532, 606, 730, 998, 1075, 1372, 2072
MalI GATC 3 cut(s) 1257, 1503, 1796
MboI GATC 3 cut(s) 1255, 1501, 1794
MboII GAAGA 8 cut(s) 367, 964, 1433, 1739, 1816, 1958, 1961, 2059
MflI RGATCY 1 cut(s) 1794
MhlI GDGCHC 1 cut(s) 1416
MluCI AATT 7 cut(s) 40, 332, 428, 1618, 1767, 2010, 2118
MlyI GAGTC 3 cut(s) 405, 1225, 1323
MmeI TCCRAC 4 cut(s) 465, 611, 1681, 1822
Mph1103I ATGCAT 1 cut(s) 567
MroNI GCCGGC 1 cut(s) 1605
MroXI GAANNNNTTC 2 cut(s) 332, 1965
MseI TTAA 5 cut(s) 371, 1391, 1770, 2085, 2151
MslI CAYNNNNRTG 4 cut(s) 135, 1014, 1493, 1980
MspA1I CMGCKG 2 cut(s) 1736, 2163
MspI CCGG 5 cut(s) 229, 1473, 1606, 1782, 1837
MspR9I CCNGG 2 cut(s) 1473, 1782
Mva1269I GAATGC 2 cut(s) 719, 915
MvnI CGCG 1 cut(s) 1826
MwoI GCNNNNNNNGC 4 cut(s) 27, 313, 1933, 2013
NaeI GCCGGC 1 cut(s) 1607
NciI CCSGG 2 cut(s) 1473, 1782
NdeII GATC 3 cut(s) 1255, 1501, 1794
NgoMIV GCCGGC 1 cut(s) 1605
NlaIV GGNNCC 4 cut(s) 1183, 1680, 1796, 2141
NmuCI GTSAC 2 cut(s) 1075, 2072
NruI TCGCGA 1 cut(s) 1826
NsiI ATGCAT 1 cut(s) 567
NspI RCATGY 2 cut(s) 569, 1098
PagI TCATGA 1 cut(s) 1341
PctI GAATGC 2 cut(s) 719, 915
PdiI GCCGGC 1 cut(s) 1607
PdmI GAANNNNTTC 2 cut(s) 332, 1965
PfeI GAWTC 5 cut(s) 57, 793, 1068, 1714, 1807
PinAI ACCGGT 1 cut(s) 1836
PkrI GCNGC 5 cut(s) 1403, 1735, 1738, 2162, 2165
PleI GAGTC 3 cut(s) 404, 1224, 1323
PpsI GAGTC 3 cut(s) 404, 1224, 1323
PshAI GACNNNNGTC 1 cut(s) 1839
PspEI GGTNACC 2 cut(s) 71, 606
PspFI CCCAGC 2 cut(s) 1409, 1627
PspN4I GGNNCC 4 cut(s) 1183, 1680, 1796, 2141
PspPI GGNCC 1 cut(s) 1679
PsuI RGATCY 1 cut(s) 1794
PvuII CAGCTG 2 cut(s) 1736, 2163
RruI TCGCGA 1 cut(s) 1826
RsaI GTAC 3 cut(s) 164, 1160, 1965
RsaNI GTAC 3 cut(s) 163, 1159, 1964
RseI CAYNNNNRTG 4 cut(s) 135, 1014, 1493, 1980
SaqAI TTAA 5 cut(s) 371, 1391, 1770, 2085, 2151
SatI GCNGC 5 cut(s) 1402, 1734, 1737, 2161, 2164
Sau3AI GATC 3 cut(s) 1255, 1501, 1794
Sau96I GGNCC 1 cut(s) 1679
ScaI AGTACT 1 cut(s) 1965
SchI GAGTC 3 cut(s) 405, 1225, 1323
ScrFI CCNGG 2 cut(s) 1473, 1782
SduI GDGCHC 1 cut(s) 1416
SfaNI GCATC 9 cut(s) 30, 294, 645, 899, 1216, 1473, 1743, 1909, 1923
SfcI CTRYAG 1 cut(s) 741
SmiMI CAYNNNNRTG 4 cut(s) 135, 1014, 1493, 1980
SmlI CTYRAG 2 cut(s) 590, 1570
SmoI CTYRAG 2 cut(s) 590, 1570
Sse9I AATT 7 cut(s) 40, 332, 428, 1618, 1767, 2010, 2118
SspI AATATT 1 cut(s) 1436
SspMI CTAG 3 cut(s) 174, 366, 627
StyD4I CCNGG 2 cut(s) 1471, 1780
StyI CCWWGG 1 cut(s) 1105
TaaI ACNGT 4 cut(s) 283, 532, 1004, 1982
TaiI ACGT 2 cut(s) 471, 1944
TaqI TCGA 5 cut(s) 45, 344, 705, 723, 1662
TaqII GACCGA 1 cut(s) 97
TasI AATT 7 cut(s) 40, 332, 428, 1618, 1767, 2010, 2118
TatI WGTACW 2 cut(s) 162, 1963
TfiI GAWTC 5 cut(s) 57, 793, 1068, 1714, 1807
Tru1I TTAA 5 cut(s) 371, 1391, 1770, 2085, 2151
Tru9I TTAA 5 cut(s) 371, 1391, 1770, 2085, 2151
TscAI CASTG 3 cut(s) 900, 1087, 1987
TseFI GTSAC 2 cut(s) 1075, 2072
TseI GCWGC 5 cut(s) 1401, 1733, 1736, 2160, 2163
Tsp45I GTSAC 2 cut(s) 1075, 2072
TspGWI ACGGA 3 cut(s) 417, 663, 1022
TspRI CASTG 3 cut(s) 900, 1087, 1987
XapI RAATTY 1 cut(s) 1618
XbaI TCTAGA 1 cut(s) 173
XceI RCATGY 2 cut(s) 569, 1098
XmiI GTMKAC 1 cut(s) 645
XmnI GAANNNNTTC 2 cut(s) 332, 1965
XspI CTAG 3 cut(s) 174, 366, 627
ZrmI AGTACT 1 cut(s) 1965
Zsp2I ATGCAT 1 cut(s) 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.