TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000018708 |
| rosa_multiflora | Rmu_co8330649.1_g000001 Rmu_sc0009360.1_g000039 Rmu_sc0009360.1_g000041 |
| rosa_roxburghii | Rroxscaffold_2G00121740 |
| rosa_samantha | Rh3BG038000 Rh3CG036700 Rh6AG168800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 59, 72 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AfaI | GTAC | 1 cut(s) | 18 |
| AflII | CTTAAG | 1 cut(s) | 295 |
| AgsI | TTSAA | 2 cut(s) | 170, 199 |
| AjnI | CCWGG | 1 cut(s) | 285 |
| AluBI | AGCT | 2 cut(s) | 74, 241 |
| AluI | AGCT | 2 cut(s) | 74, 241 |
| Alw26I | GTCTC | 1 cut(s) | 262 |
| AlwI | GGATC | 2 cut(s) | 59, 72 |
| AoxI | GGCC | 1 cut(s) | 283 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| AsuC2I | CCSGG | 1 cut(s) | 159 |
| BamHI | GGATCC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 217 |
| BciT130I | CCWGG | 1 cut(s) | 287 |
| BcnI | CCSGG | 1 cut(s) | 159 |
| BcoDI | GTCTC | 1 cut(s) | 262 |
| BfrI | CTTAAG | 1 cut(s) | 295 |
| Bme1390I | CCNGG | 2 cut(s) | 159, 287 |
| BmiI | GGNNCC | 1 cut(s) | 66 |
| BmrFI | CCNGG | 2 cut(s) | 159, 287 |
| BmsI | GCATC | 2 cut(s) | 75, 133 |
| BpmI | CTGGAG | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 4 cut(s) | 54, 115, 248, 274 |
| BpuMI | CCSGG | 1 cut(s) | 159 |
| BseBI | CCWGG | 1 cut(s) | 287 |
| BseGI | GGATG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 285 |
| BsiSI | CCGG | 1 cut(s) | 159 |
| BsmAI | GTCTC | 1 cut(s) | 262 |
| BsnI | GGCC | 1 cut(s) | 285 |
| Bsp143I | GATC | 1 cut(s) | 64 |
| BspANI | GGCC | 1 cut(s) | 285 |
| BspLI | GGNNCC | 1 cut(s) | 66 |
| BspPI | GGATC | 2 cut(s) | 59, 72 |
| BspTI | CTTAAG | 1 cut(s) | 295 |
| BssMI | GATC | 1 cut(s) | 64 |
| Bst2UI | CCWGG | 1 cut(s) | 287 |
| BstAFI | CTTAAG | 1 cut(s) | 295 |
| BstF5I | GGATG | 1 cut(s) | 90 |
| BstKTI | GATC | 1 cut(s) | 67 |
| BstMAI | GTCTC | 1 cut(s) | 262 |
| BstMBI | GATC | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 30, 247, 291 |
| BstNI | CCWGG | 1 cut(s) | 287 |
| BstSCI | CCNGG | 2 cut(s) | 157, 285 |
| BstX2I | RGATCY | 1 cut(s) | 64 |
| BstYI | RGATCY | 1 cut(s) | 64 |
| BsuRI | GGCC | 1 cut(s) | 285 |
| BtsCI | GGATG | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 17 |
| CviJI | RGCY | 3 cut(s) | 74, 241, 285 |
| CviKI_1 | RGCY | 3 cut(s) | 74, 241, 285 |
| CviQI | GTAC | 1 cut(s) | 17 |
| DpnI | GATC | 1 cut(s) | 66 |
| DpnII | GATC | 1 cut(s) | 64 |
| EcoRII | CCWGG | 1 cut(s) | 285 |
| EcoT22I | ATGCAT | 2 cut(s) | 90, 126 |
| FaiI | YATR | 9 cut(s) | 35, 56, 90, 120, 122, 178, 246, 248, 292 |
| FauNDI | CATATG | 2 cut(s) | 120, 246 |
| FokI | GGATG | 1 cut(s) | 97 |
| GsuI | CTGGAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 1 cut(s) | 285 |
| HapII | CCGG | 1 cut(s) | 159 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HinfI | GANTC | 2 cut(s) | 51, 99 |
| HpaII | CCGG | 1 cut(s) | 159 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 3 cut(s) | 128, 224, 265 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyAV | CCTTC | 1 cut(s) | 176 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 124 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 30, 247, 291 |
| Kzo9I | GATC | 1 cut(s) | 64 |
| LpnPI | CCDG | 7 cut(s) | 25, 43, 66, 172, 237, 272, 299 |
| LweI | GCATC | 2 cut(s) | 75, 133 |
| MalI | GATC | 1 cut(s) | 66 |
| MboI | GATC | 1 cut(s) | 64 |
| MflI | RGATCY | 1 cut(s) | 64 |
| MluCI | AATT | 3 cut(s) | 37, 142, 170 |
| MmeI | TCCRAC | 1 cut(s) | 42 |
| MnlI | CCTC | 1 cut(s) | 78 |
| Mph1103I | ATGCAT | 2 cut(s) | 90, 126 |
| MseI | TTAA | 1 cut(s) | 296 |
| MslI | CAYNNNNRTG | 2 cut(s) | 83, 129 |
| MspCI | CTTAAG | 1 cut(s) | 295 |
| MspI | CCGG | 1 cut(s) | 159 |
| MspR9I | CCNGG | 2 cut(s) | 159, 287 |
| MvaI | CCWGG | 1 cut(s) | 287 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 30, 247, 291 |
| NciI | CCSGG | 1 cut(s) | 159 |
| NdeI | CATATG | 2 cut(s) | 120, 246 |
| NdeII | GATC | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 1 cut(s) | 66 |
| NsiI | ATGCAT | 2 cut(s) | 90, 126 |
| PfeI | GAWTC | 2 cut(s) | 51, 99 |
| Psp6I | CCWGG | 1 cut(s) | 285 |
| PspGI | CCWGG | 1 cut(s) | 285 |
| PspN4I | GGNNCC | 1 cut(s) | 66 |
| PsuI | RGATCY | 1 cut(s) | 64 |
| RsaI | GTAC | 1 cut(s) | 18 |
| RsaNI | GTAC | 1 cut(s) | 17 |
| RseI | CAYNNNNRTG | 2 cut(s) | 83, 129 |
| SaqAI | TTAA | 1 cut(s) | 296 |
| Sau3AI | GATC | 1 cut(s) | 64 |
| ScrFI | CCNGG | 2 cut(s) | 159, 287 |
| SetI | ASST | 3 cut(s) | 76, 243, 291 |
| SfaNI | GCATC | 2 cut(s) | 75, 133 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 83, 129 |
| SmlI | CTYRAG | 5 cut(s) | 69, 94, 253, 263, 295 |
| SmoI | CTYRAG | 5 cut(s) | 69, 94, 253, 263, 295 |
| Sse9I | AATT | 3 cut(s) | 37, 142, 170 |
| StyD4I | CCNGG | 2 cut(s) | 157, 285 |
| TasI | AATT | 3 cut(s) | 37, 142, 170 |
| TatI | WGTACW | 1 cut(s) | 16 |
| TfiI | GAWTC | 2 cut(s) | 51, 99 |
| Tru1I | TTAA | 1 cut(s) | 296 |
| Tru9I | TTAA | 1 cut(s) | 296 |
| TspDTI | ATGAA | 1 cut(s) | 233 |
| Vha464I | CTTAAG | 1 cut(s) | 295 |
| XapI | RAATTY | 1 cut(s) | 142 |
| Zsp2I | ATGCAT | 2 cut(s) | 90, 126 |