Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0009600

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG322500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGAAGACTTTCCGGGCCGGAATCGCGATGCGAAACGGAAACGTGACGAGGCCGTCTTGGCCATCAACGGCAACACTAACGGCATCGACCTTGCCGTGTTGGAGGCGTTAGCGAAGGAAAGCGCAGTTGAAGCGCTGGACCCTCGAACCCTAAAGAAGCTGGTGCTGGCCTTCGAGCGCCGCCTCAAGGACAACATCGCCGCCCGTCTCAAGTACCCGGACCAACCGGAGCGCTTCGCCGACTCCGAAATCGAACTCCACGAAGAGCTTCAGAAGCTCAAAGGCCTCGCCAGCGCTCCCGAGCTCTACCCCGAACTCGTCGCCCTCAACACTGTTCCCTCCATCCTCAACCTCCTCAGCCACGACAACACCGACATTGCGATCGACGTCGTTCAGTTGCTGCAGGACTTGACCGACGAGGACACCGTCGACGAGAACGACGAGCCCGCTCGGGTCCTGGTGGATGCGCTCGTCGACAACAATGTGCTCGAGCTCTTGGTTCAGAATCTGCTCCGGTTGTCCGACTCCGACCCCGACGAGATGGCCGCCGTCCACGGCACTCTCGCGACGGTCGAGAATCTGATTGAGGTTAAGCCGGCGGTGGCGGAGTTGGTGTGCGAAAAGACCAAATTGCTCAAGTGGTTGATGAGTAAGATCAAGGTGAAGGAGTTTGATGGAAACAAACAGTACGCCTCGGAAATACTGGCTATACTGCTGCAGAATAGTGAGGCCAATCAGAAGAGGTTGGGGCAGATGAACGGCGTGGATGTGCTGCTTCAGGCGGTGGCTATGTACAAGTCCAAGGACCCCAAGAGCCCCGACGAGGCGGAGATGCTGGAGAATCTGTTCAATTGTTTGTGTGGTTTGTTGATGCCATTGGAGAACAGGGACAAGTTTCTCAAGGCTGAAGGGGTGGAGTTGATGATTATTATAATGAAGCAGAAGAAGTCTGCTTACGGTTCCGCCATAAGGGCTCTTGATTTTGCAATGACCAAGTACCCGCCGGCTTGTGAACGTTTTGTTGATGTTTTGGGGTTGAAGACGGCCTTTGCAGCTTTTATGGGTAAGGTTCCCATTAATAAGAATGAAAAGAAAGAAAGGTATCATGAGGAGTTGGAGGAGCGCATTGTGTCACTAATTGCATCGTTATTTGGTGGTATTATGAGGGGTTCTAGAAGGGAGAGACTGTTGAGCAAGTTTGTGGAAAATGAGTGTGAAAAGATAGACCGGCTTATGGAACTTTATATGAGATATTCGAATAGAGTTAAAGCTGAAACTGACCGAATTGACCAGCTTGATCTTGATGATTTAGAGATGGATGAAGAGGAAATATACATTCGGAAGCTTGAAGCTGGACTTTATACCCTTCAGTTGATTGCTGTTATTCTGGGTCATCTTTGGTGCTCTGAGCATCCTCAAATGAGAGGAAGAATCGAACTACTTCTCAAGCAGCAAAAGCTTACTAAGAAGGATATTAAGGATATACTTCAGGAGTATCACGACAACATTGGTGATATGGAAGGAGCGGAAGAAAAAGAGCGATCACAGGCAAAGATTCAAAAATTCATCTCAGCTTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CTNNBL

Protein Analysis

527

Amino Acids

59.95

Weight (kDa)

5.0

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTNNBL	PF08216	33 - 497	5.2e-170	Catenin-beta-like, Arm-motif containing nuclear
ARM_ARMC5	PF24768	157 - 321	3.3e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02710
fragaria_vesca	FvH4_1g27560
malus_domestica	MD11G1181900.v1.1
prunus_persica	Prupe.3G013000_v2.0.a1
pyrus_communis	pycom11g15680
rosa_chinensis	RchiOBHm_Chr3g0487991
rosa_laevigata	RLG00000021476 RLG00000022950
rosa_multiflora	Rmu_co8254523.1_g000001 Rmu_sc0007320.1_g000001
rosa_roxburghii	Rroxscaffold_6G00394360
rosa_rugosa	Rorug03G0237700 Rorug03G0237700 Rorug03G0237800 Rorug03G0237900 Rorug03G0237900
rosa_samantha	Rh3AG285700 Rh3BG322500 Rh3CG321200 Rh3DG319300 Rh7AG275700
rosa_wichuraiana	Rw3G025330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	932
AasI	GACNNNNNNGTC	1 cut(s)	53
AatII	GACGTC	1 cut(s)	390
AccBSI	CCGCTC	2 cut(s)	449, 1526
AccI	GTMKAC	2 cut(s)	429, 474
AccII	CGCG	2 cut(s)	27, 566
AclI	AACGTT	1 cut(s)	1015
AcoI	YGGCCR	2 cut(s)	60, 543
AcsI	RAATTY	1 cut(s)	1562
AcuI	CTGAAG	5 cut(s)	254, 761, 927, 1352, 1472
AcyI	GRCGYC	1 cut(s)	387
AfaI	GTAC	4 cut(s)	215, 689, 794, 998
AfeI	AGCGCT	3 cut(s)	135, 233, 295
AfiI	CCNNNNNNNGG	4 cut(s)	187, 823, 969, 1234
AgsI	TTSAA	5 cut(s)	131, 850, 1039, 1349, 1559
AjnI	CCWGG	1 cut(s)	456
AloI	GAACNNNNNNTCC	2 cut(s)	830, 862
Alw21I	GWGCWC	4 cut(s)	306, 489, 495, 1406
Alw26I	GTCTC	2 cut(s)	212, 1177
AlwNI	CAGNNNCTG	2 cut(s)	400, 508
Ama87I	CYCGRG	3 cut(s)	299, 450, 488
Aor51HI	AGCGCT	3 cut(s)	135, 233, 295
AoxI	GGCC	8 cut(s)	16, 51, 60, 168, 283, 543, 729, 1044
ApeKI	GCWGC	5 cut(s)	400, 715, 772, 1052, 1450
ApoI	RAATTY	1 cut(s)	1562
AseI	ATTAAT	1 cut(s)	1077
Asp700I	GAANNNNTTC	4 cut(s)	9, 267, 845, 1440
AspLEI	GCGC	7 cut(s)	125, 136, 180, 234, 296, 469, 1125
AspS9I	GGNCC	5 cut(s)	16, 139, 220, 454, 805
AsuC2I	CCSGG	2 cut(s)	15, 218
AsuHPI	GGTGA	2 cut(s)	673, 1523
AsuII	TTCGAA	1 cut(s)	1256
AvaI	CYCGRG	3 cut(s)	299, 450, 488
AvaII	GGWCC	4 cut(s)	139, 220, 454, 805
BalI	TGGCCA	1 cut(s)	62
BanII	GRGCYC	5 cut(s)	306, 447, 495, 818, 976
BarI	GAAGNNNNNNTAC	2 cut(s)	938, 970
BbsI	GAAGAC	2 cut(s)	12, 1046
Bbv12I	GWGCWC	4 cut(s)	306, 489, 495, 1406
BbvCI	CCTCAGC	1 cut(s)	356
BbvI	GCAGC	5 cut(s)	387, 702, 759, 1064, 1462
BccI	CCATC	5 cut(s)	71, 350, 535, 668, 1309
BceAI	ACGGC	8 cut(s)	38, 80, 85, 97, 533, 571, 775, 1059
BciT130I	CCWGG	1 cut(s)	458
BcnI	CCSGG	2 cut(s)	15, 218
BcoDI	GTCTC	2 cut(s)	212, 1177
BfaI	CTAG	1 cut(s)	1173
BfmI	CTRYAG	2 cut(s)	401, 716
BfoI	RGCGCY	4 cut(s)	137, 181, 235, 297
BglI	GCCNNNNNGGC	2 cut(s)	59, 971
BisI	GCNGC	8 cut(s)	181, 201, 401, 546, 716, 773, 1053, 1451
BlsI	GCNGC	8 cut(s)	182, 202, 402, 547, 717, 774, 1054, 1452
Bme1390I	CCNGG	3 cut(s)	15, 218, 458
Bme18I	GGWCC	4 cut(s)	139, 220, 454, 805
BmeT110I	CYCGRG	3 cut(s)	299, 450, 488
BmgT120I	GGNCC	5 cut(s)	16, 139, 220, 454, 805
BmiI	GGNNCC	5 cut(s)	141, 455, 807, 961, 1071
BmrFI	CCNGG	3 cut(s)	15, 218, 458
BmsI	GCATC	7 cut(s)	19, 93, 454, 822, 861, 1151, 1420
BpiI	GAAGAC	2 cut(s)	12, 1046
BpmI	CTGGAG	1 cut(s)	857
Bpu10I	CCTNAGC	1 cut(s)	356
Bpu14I	TTCGAA	1 cut(s)	1256
BpuEI	CTTGAG	5 cut(s)	170, 194, 620, 884, 1430
BpuMI	CCSGG	2 cut(s)	15, 218
BsaHI	GRCGYC	1 cut(s)	387
BsaJI	CCNNGG	3 cut(s)	553, 693, 801
BsaWI	WCCGGW	2 cut(s)	226, 513
BsaXI	ACNNNNNCTCC	6 cut(s)	599, 629, 830, 860, 1172, 1202
Bsc4I	CCNNNNNNNGG	4 cut(s)	187, 823, 969, 1234
Bse118I	RCCGGY	3 cut(s)	595, 1003, 1227
Bse1I	ACTGG	1 cut(s)	708
Bse3DI	GCAATG	2 cut(s)	375, 993
BseBI	CCWGG	1 cut(s)	458
BseDI	CCNNGG	3 cut(s)	553, 693, 801
BseGI	GGATG	5 cut(s)	342, 469, 772, 1324, 1411
BseLI	CCNNNNNNNGG	4 cut(s)	187, 823, 969, 1234
BseMI	GCAATG	2 cut(s)	375, 993
BseMII	CTCAG	3 cut(s)	370, 1398, 1584
BseNI	ACTGG	1 cut(s)	708
BseRI	GAGGAG	3 cut(s)	344, 1124, 1133
BseXI	GCAGC	5 cut(s)	387, 702, 759, 1064, 1462
Bsh1236I	CGCG	2 cut(s)	27, 566
Bsh1285I	CGRYCG	2 cut(s)	384, 573
BshFI	GGCC	8 cut(s)	18, 53, 62, 170, 285, 545, 731, 1046
BsiEI	CGRYCG	2 cut(s)	384, 573
BsiHKAI	GWGCWC	4 cut(s)	306, 489, 495, 1406
BsiHKCI	CYCGRG	3 cut(s)	299, 450, 488
BsiSI	CCGG	8 cut(s)	14, 19, 218, 227, 514, 596, 1004, 1228
BslFI	GGGAC	1 cut(s)	902
BslI	CCNNNNNNNGG	4 cut(s)	187, 823, 969, 1234
BsmAI	GTCTC	2 cut(s)	212, 1177
BsmBI	CGTCTC	1 cut(s)	212
BsmFI	GGGAC	1 cut(s)	902
BsnI	GGCC	8 cut(s)	18, 53, 62, 170, 285, 545, 731, 1046
BsoBI	CYCGRG	3 cut(s)	299, 450, 488
Bsp119I	TTCGAA	1 cut(s)	1256
Bsp1286I	GDGCHC	7 cut(s)	306, 447, 489, 495, 818, 976, 1406
Bsp1407I	TGTACA	1 cut(s)	792
Bsp143I	GATC	4 cut(s)	381, 654, 1297, 1541
Bsp68I	TCGCGA	2 cut(s)	27, 566
BspANI	GGCC	8 cut(s)	18, 53, 62, 170, 285, 545, 731, 1046
BspCNI	CTCAG	3 cut(s)	369, 1399, 1583
BspFNI	CGCG	2 cut(s)	27, 566
BspHI	TCATGA	1 cut(s)	1105
BspLI	GGNNCC	5 cut(s)	141, 455, 807, 961, 1071
BspMAI	CTGCAG	2 cut(s)	405, 720
BspQI	GCTCTTC	1 cut(s)	258
BspT104I	TTCGAA	1 cut(s)	1256
BsrBI	CCGCTC	2 cut(s)	449, 1526
BsrDI	GCAATG	2 cut(s)	375, 993
BsrFI	RCCGGY	3 cut(s)	595, 1003, 1227
BsrGI	TGTACA	1 cut(s)	792
BsrI	ACTGG	1 cut(s)	708
BssAI	RCCGGY	3 cut(s)	595, 1003, 1227
BssECI	CCNNGG	3 cut(s)	553, 693, 801
BssMI	GATC	4 cut(s)	381, 654, 1297, 1541
BssNI	GRCGYC	1 cut(s)	387
BssT1I	CCWWGG	1 cut(s)	801
Bst2UI	CCWGG	1 cut(s)	458
Bst4CI	ACNGT	6 cut(s)	334, 427, 571, 687, 959, 1188
Bst6I	CTCTTC	3 cut(s)	258, 734, 1317
BstACI	GRCGYC	1 cut(s)	387
BstAUI	TGTACA	1 cut(s)	792
BstBI	TTCGAA	1 cut(s)	1256
BstC8I	GCNNGC	5 cut(s)	168, 292, 447, 597, 1005
BstDEI	CTNAG	4 cut(s)	356, 1407, 1464, 1570
BstDSI	CCRYGG	1 cut(s)	553
BstF5I	GGATG	5 cut(s)	342, 469, 772, 1324, 1411
BstFNI	CGCG	2 cut(s)	27, 566
BstH2I	RGCGCY	4 cut(s)	137, 181, 235, 297
BstHHI	GCGC	7 cut(s)	125, 136, 180, 234, 296, 469, 1125
BstKTI	GATC	4 cut(s)	384, 657, 1300, 1544
BstMAI	GTCTC	2 cut(s)	212, 1177
BstMBI	GATC	4 cut(s)	381, 654, 1297, 1541
BstMCI	CGRYCG	2 cut(s)	384, 573
BstMWI	GCNNNNNNNGC	8 cut(s)	24, 59, 131, 274, 291, 971, 1052, 1456
BstNI	CCWGG	1 cut(s)	458
BstSCI	CCNGG	3 cut(s)	13, 216, 456
BstSFI	CTRYAG	2 cut(s)	401, 716
BstUI	CGCG	2 cut(s)	27, 566
BstV1I	GCAGC	5 cut(s)	387, 702, 759, 1064, 1462
BstV2I	GAAGAC	2 cut(s)	12, 1046
BsuRI	GGCC	8 cut(s)	18, 53, 62, 170, 285, 545, 731, 1046
BtgI	CCRYGG	1 cut(s)	553
BtgZI	GCGATG	2 cut(s)	42, 181
BtsCI	GGATG	5 cut(s)	342, 469, 772, 1324, 1411
BtsIMutI	CAGTG	1 cut(s)	330
BtuMI	TCGCGA	2 cut(s)	27, 566
Cac8I	GCNNGC	5 cut(s)	168, 292, 447, 597, 1005
CaiI	CAGNNNCTG	2 cut(s)	400, 508
CciI	TCATGA	1 cut(s)	1105
CfoI	GCGC	7 cut(s)	125, 136, 180, 234, 296, 469, 1125
Cfr10I	RCCGGY	3 cut(s)	595, 1003, 1227
Cfr13I	GGNCC	5 cut(s)	16, 139, 220, 454, 805
Csp6I	GTAC	4 cut(s)	214, 688, 793, 997
CviAII	CATG	1 cut(s)	1106
CviQI	GTAC	4 cut(s)	214, 688, 793, 997
DdeI	CTNAG	4 cut(s)	356, 1407, 1464, 1570
DpnI	GATC	4 cut(s)	383, 656, 1299, 1543
DpnII	GATC	4 cut(s)	381, 654, 1297, 1541
DrdI	GACNNNNNNGTC	1 cut(s)	53
DseDI	GACNNNNNNGTC	1 cut(s)	53
EaeI	YGGCCR	2 cut(s)	60, 543
Eam1104I	CTCTTC	3 cut(s)	258, 734, 1317
EarI	CTCTTC	3 cut(s)	258, 734, 1317
EciI	GGCGGA	3 cut(s)	620, 842, 952
Ecl136II	GAGCTC	2 cut(s)	304, 493
Eco130I	CCWWGG	1 cut(s)	801
Eco147I	AGGCCT	1 cut(s)	285
Eco24I	GRGCYC	5 cut(s)	306, 447, 495, 818, 976
Eco47I	GGWCC	4 cut(s)	139, 220, 454, 805
Eco47III	AGCGCT	3 cut(s)	135, 233, 295
Eco53kI	GAGCTC	2 cut(s)	304, 493
Eco57I	CTGAAG	5 cut(s)	254, 761, 927, 1352, 1472
Eco88I	CYCGRG	3 cut(s)	299, 450, 488
EcoICRI	GAGCTC	2 cut(s)	304, 493
EcoO109I	RGGNCCY	2 cut(s)	454, 805
EcoRII	CCWGG	1 cut(s)	456
EcoT14I	CCWWGG	1 cut(s)	801
EcoT38I	GRGCYC	5 cut(s)	306, 447, 495, 818, 976
ErhI	CCWWGG	1 cut(s)	801
Esp3I	CGTCTC	1 cut(s)	212
FaeI	CATG	1 cut(s)	1109
FalI	AAGNNNNNCTT	4 cut(s)	1031, 1063, 1341, 1373
FaqI	GGGAC	1 cut(s)	902
FatI	CATG	1 cut(s)	1105
FauI	CCCGC	2 cut(s)	454, 1008
FblI	GTMKAC	2 cut(s)	429, 474
Fnu4HI	GCNGC	8 cut(s)	181, 201, 401, 546, 716, 773, 1053, 1451
FokI	GGATG	5 cut(s)	329, 476, 779, 1331, 1398
FriOI	GRGCYC	5 cut(s)	306, 447, 495, 818, 976
Fsp4HI	GCNGC	8 cut(s)	181, 201, 401, 546, 716, 773, 1053, 1451
FspBI	CTAG	1 cut(s)	1173
GlaI	GCGC	7 cut(s)	124, 135, 179, 233, 295, 468, 1124
GluI	GCNGC	8 cut(s)	181, 201, 401, 546, 716, 773, 1053, 1451
GsuI	CTGGAG	1 cut(s)	857
HaeII	RGCGCY	4 cut(s)	137, 181, 235, 297
HaeIII	GGCC	8 cut(s)	18, 53, 62, 170, 285, 545, 731, 1046
HapII	CCGG	8 cut(s)	14, 19, 218, 227, 514, 596, 1004, 1228
HhaI	GCGC	7 cut(s)	125, 136, 180, 234, 296, 469, 1125
Hin1I	GRCGYC	1 cut(s)	387
Hin1II	CATG	1 cut(s)	1109
Hin6I	GCGC	7 cut(s)	123, 134, 178, 232, 294, 467, 1123
HinP1I	GCGC	7 cut(s)	123, 134, 178, 232, 294, 467, 1123
HincII	GTYRAC	2 cut(s)	430, 475
HindII	GTYRAC	2 cut(s)	430, 475
HindIII	AAGCTT	2 cut(s)	1343, 1457
HinfI	GANTC	8 cut(s)	22, 242, 505, 524, 577, 841, 1431, 1555
HpaII	CCGG	8 cut(s)	14, 19, 218, 227, 514, 596, 1004, 1228
HphI	GGTGA	2 cut(s)	673, 1523
Hpy166II	GTNNAC	4 cut(s)	430, 475, 553, 1013
Hpy8I	GTNNAC	4 cut(s)	430, 475, 553, 1013
HpyAV	CCTTC	8 cut(s)	109, 181, 658, 902, 1170, 1376, 1462, 1514
HpyCH4III	ACNGT	6 cut(s)	334, 427, 571, 687, 959, 1188
HpyCH4IV	ACGT	3 cut(s)	43, 387, 1015
HpyCH4V	TGCA	5 cut(s)	403, 718, 986, 1052, 1142
HpyF10VI	GCNNNNNNNGC	8 cut(s)	24, 59, 131, 274, 291, 971, 1052, 1456
HpyF3I	CTNAG	4 cut(s)	356, 1407, 1464, 1570
HpySE526I	ACGT	3 cut(s)	43, 387, 1015
Hsp92I	GRCGYC	1 cut(s)	387
Hsp92II	CATG	1 cut(s)	1109
HspAI	GCGC	7 cut(s)	123, 134, 178, 232, 294, 467, 1123
KroI	GCCGGC	2 cut(s)	595, 1003
KroNI	GCCGGC	2 cut(s)	597, 1005
Kzo9I	GATC	4 cut(s)	381, 654, 1297, 1541
LguI	GCTCTTC	1 cut(s)	258
LmnI	GCTCC	5 cut(s)	229, 301, 516, 1120, 1523
Lsp1109I	GCAGC	5 cut(s)	387, 702, 759, 1064, 1462
LweI	GCATC	7 cut(s)	19, 93, 454, 822, 861, 1151, 1420
MaeI	CTAG	1 cut(s)	1173
MaeII	ACGT	3 cut(s)	43, 387, 1015
MaeIII	GTNAC	2 cut(s)	44, 1131
MalI	GATC	4 cut(s)	383, 656, 1299, 1543
MbiI	CCGCTC	2 cut(s)	449, 1526
MboI	GATC	4 cut(s)	381, 654, 1297, 1541
MboII	GAAGA	8 cut(s)	17, 275, 751, 955, 1051, 1334, 1440, 1541
MfeI	CAATTG	1 cut(s)	850
MhlI	GDGCHC	7 cut(s)	306, 447, 489, 495, 818, 976, 1406
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	5 cut(s)	629, 850, 1137, 1284, 1562
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	2 cut(s)	236, 518
MmeI	TCCRAC	4 cut(s)	81, 546, 552, 1095
Mox20I	TGGCCA	1 cut(s)	62
MroNI	GCCGGC	2 cut(s)	595, 1003
MroXI	GAANNNNTTC	4 cut(s)	9, 267, 845, 1440
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	4 cut(s)	591, 1077, 1266, 1476
Msp20I	TGGCCA	1 cut(s)	62
MspI	CCGG	8 cut(s)	14, 19, 218, 227, 514, 596, 1004, 1228
MspR9I	CCNGG	3 cut(s)	15, 218, 458
MunI	CAATTG	1 cut(s)	850
MvaI	CCWGG	1 cut(s)	458
MvnI	CGCG	2 cut(s)	27, 566
MwoI	GCNNNNNNNGC	8 cut(s)	24, 59, 131, 274, 291, 971, 1052, 1456
NaeI	GCCGGC	2 cut(s)	597, 1005
NciI	CCSGG	2 cut(s)	15, 218
NdeII	GATC	4 cut(s)	381, 654, 1297, 1541
NgoMIV	GCCGGC	2 cut(s)	595, 1003
NlaIII	CATG	1 cut(s)	1109
NlaIV	GGNNCC	5 cut(s)	141, 455, 807, 961, 1071
NmuCI	GTSAC	2 cut(s)	44, 1131
NruI	TCGCGA	2 cut(s)	27, 566
NspV	TTCGAA	1 cut(s)	1256
PaeR7I	CTCGAG	1 cut(s)	488
PagI	TCATGA	1 cut(s)	1105
PceI	AGGCCT	1 cut(s)	285
PciSI	GCTCTTC	1 cut(s)	258
PcsI	WCGNNNNNNNCGW	8 cut(s)	93, 243, 258, 369, 423, 435, 438, 570
PdiI	GCCGGC	2 cut(s)	597, 1005
PdmI	GAANNNNTTC	4 cut(s)	9, 267, 845, 1440
PfeI	GAWTC	6 cut(s)	22, 505, 577, 841, 1431, 1555
PflFI	GACNNNGTC	1 cut(s)	425
PkrI	GCNGC	8 cut(s)	182, 202, 402, 547, 717, 774, 1054, 1452
Ple19I	CGATCG	1 cut(s)	384
PleI	GAGTC	2 cut(s)	236, 518
PpsI	GAGTC	2 cut(s)	236, 518
PpuMI	RGGWCCY	2 cut(s)	454, 805
PshBI	ATTAAT	1 cut(s)	1077
PsiI	TTATAA	1 cut(s)	932
Psp124BI	GAGCTC	2 cut(s)	306, 495
Psp1406I	AACGTT	1 cut(s)	1015
Psp5II	RGGWCCY	2 cut(s)	454, 805
Psp6I	CCWGG	1 cut(s)	456
PspGI	CCWGG	1 cut(s)	456
PspN4I	GGNNCC	5 cut(s)	141, 455, 807, 961, 1071
PspPI	GGNCC	5 cut(s)	16, 139, 220, 454, 805
PspPPI	RGGWCCY	2 cut(s)	454, 805
PspXI	VCTCGAGB	1 cut(s)	488
PstI	CTGCAG	2 cut(s)	405, 720
PstNI	CAGNNNCTG	2 cut(s)	400, 508
PsyI	GACNNNGTC	1 cut(s)	425
PvuI	CGATCG	1 cut(s)	384
RruI	TCGCGA	2 cut(s)	27, 566
RsaI	GTAC	4 cut(s)	215, 689, 794, 998
RsaNI	GTAC	4 cut(s)	214, 688, 793, 997
SacI	GAGCTC	2 cut(s)	306, 495
SalI	GTCGAC	2 cut(s)	428, 473
SapI	GCTCTTC	1 cut(s)	258
SaqAI	TTAA	4 cut(s)	591, 1077, 1266, 1476
SatI	GCNGC	8 cut(s)	181, 201, 401, 546, 716, 773, 1053, 1451
Sau3AI	GATC	4 cut(s)	381, 654, 1297, 1541
Sau96I	GGNCC	5 cut(s)	16, 139, 220, 454, 805
SchI	GAGTC	2 cut(s)	236, 518
ScrFI	CCNGG	3 cut(s)	15, 218, 458
SduI	GDGCHC	7 cut(s)	306, 447, 489, 495, 818, 976, 1406
SfaNI	GCATC	7 cut(s)	19, 93, 454, 822, 861, 1151, 1420
SfcI	CTRYAG	2 cut(s)	401, 716
SfiI	GGCCNNNNNGGCC	1 cut(s)	59
Sfr274I	CTCGAG	1 cut(s)	488
SfuI	TTCGAA	1 cut(s)	1256
SgrDI	CGTCGACG	1 cut(s)	428
SinI	GGWCC	4 cut(s)	139, 220, 454, 805
SlaI	CTCGAG	1 cut(s)	488
SmlI	CTYRAG	6 cut(s)	185, 209, 488, 635, 899, 1445
SmoI	CTYRAG	6 cut(s)	185, 209, 488, 635, 899, 1445
Sse9I	AATT	5 cut(s)	629, 850, 1137, 1284, 1562
SseBI	AGGCCT	1 cut(s)	285
SspMI	CTAG	1 cut(s)	1173
SstI	GAGCTC	2 cut(s)	306, 495
StuI	AGGCCT	1 cut(s)	285
StyD4I	CCNGG	3 cut(s)	13, 216, 456
StyI	CCWWGG	1 cut(s)	801
TaaI	ACNGT	6 cut(s)	334, 427, 571, 687, 959, 1188
TaiI	ACGT	3 cut(s)	46, 390, 1018
TaqII	GACCGA	2 cut(s)	428, 1296
TasI	AATT	5 cut(s)	629, 850, 1137, 1284, 1562
TatI	WGTACW	1 cut(s)	792
TauI	GCSGC	3 cut(s)	183, 203, 548
TfiI	GAWTC	6 cut(s)	22, 505, 577, 841, 1431, 1555
Tru1I	TTAA	4 cut(s)	591, 1077, 1266, 1476
Tru9I	TTAA	4 cut(s)	591, 1077, 1266, 1476
TscAI	CASTG	1 cut(s)	337
TseFI	GTSAC	2 cut(s)	44, 1131
TseI	GCWGC	5 cut(s)	400, 715, 772, 1052, 1450
Tsp45I	GTSAC	2 cut(s)	44, 1131
TspDTI	ATGAA	5 cut(s)	770, 950, 1101, 1335, 1555
TspGWI	ACGGA	1 cut(s)	52
TspRI	CASTG	1 cut(s)	337
Tth111I	GACNNNGTC	1 cut(s)	425
VpaK11BI	GGWCC	4 cut(s)	139, 220, 454, 805
VspI	ATTAAT	1 cut(s)	1077
XapI	RAATTY	1 cut(s)	1562
XbaI	TCTAGA	1 cut(s)	1172
XhoI	CTCGAG	1 cut(s)	488
XmiI	GTMKAC	2 cut(s)	429, 474
XmnI	GAANNNNTTC	4 cut(s)	9, 267, 845, 1440
XspI	CTAG	1 cut(s)	1173
ZraI	GACGTC	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.