Rh7AG275700

Beta-catenin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009600
Physical Location & Seq
Reverse (-)
28778174 .. 28778566
393 bp
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UTR
Exon/CDS
Intron
Rh7AG275700.1

Sequence Viewer

Length: 393 bp
ATGTTCTCGAGCTTTTGGTTCAAAATCTGCTCCGATTGTCCAATTCCAACCCCGATGCCCGATGAGATGGCCGTCGTCTATAGTACTCTCGCTACGATTGAGAATCTATTTGATAAACTGGTGCTGGCGGAGTTAGTGTGCGAGAACACCAAATTGCTCGAGTGGTTGATGAGTAAGATAAAGGTGAAGAAGTTTGATGGAAACAAACAGTACGCATCAGAAATACTGGCTATACTGTTGCAGAATAGTGAAGCCAATCAGATAAGGTTAAGGCAGATGAACGGCGTGGATGTACTGCTCCGGGCAGTGGCTATGTACAAGTCCAAGGACCCAAGAGCCTCAACGAGGCGGAGATGTTGGAGAATCTGTTCAATTGTTTGTGTGGGTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
CTNNBL

Protein Analysis

130

Amino Acids

14.9

Weight (kDa)

8.89

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTNNBL PF08216 23 - 115 1.6e-28 Catenin-beta-like, Arm-motif containing nuclear
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 128, 349
AcoI YGGCCR 1 cut(s) 69
AfaI GTAC 4 cut(s) 85, 212, 294, 317
AfiI CCNNNNNNNGG 2 cut(s) 307, 345
AgsI TTSAA 2 cut(s) 22, 372
AloI GAACNNNNNNTCC 2 cut(s) 352, 384
AluBI AGCT 1 cut(s) 12
AluI AGCT 1 cut(s) 12
Ama87I CYCGRG 2 cut(s) 7, 158
AoxI GGCC 1 cut(s) 69
Asp700I GAANNNNTTC 1 cut(s) 367
AspS9I GGNCC 1 cut(s) 328
AsuC2I CCSGG 1 cut(s) 302
AsuHPI GGTGA 1 cut(s) 196
AvaI CYCGRG 2 cut(s) 7, 158
AvaII GGWCC 1 cut(s) 328
BccI CCATC 2 cut(s) 61, 191
BceAI ACGGC 2 cut(s) 56, 298
BcnI CCSGG 1 cut(s) 302
BfmI CTRYAG 1 cut(s) 79
BmcAI AGTACT 1 cut(s) 85
Bme1390I CCNGG 1 cut(s) 302
Bme18I GGWCC 1 cut(s) 328
BmeT110I CYCGRG 2 cut(s) 7, 158
BmgT120I GGNCC 1 cut(s) 328
BmiI GGNNCC 1 cut(s) 330
BmrFI CCNGG 1 cut(s) 302
BmsI GCATC 2 cut(s) 45, 224
BpuMI CCSGG 1 cut(s) 302
BsaJI CCNNGG 1 cut(s) 324
BsaXI ACNNNNNCTCC 4 cut(s) 122, 152, 352, 382
Bsc4I CCNNNNNNNGG 2 cut(s) 307, 345
Bse1I ACTGG 2 cut(s) 123, 231
BseDI CCNNGG 1 cut(s) 324
BseGI GGATG 1 cut(s) 295
BseLI CCNNNNNNNGG 2 cut(s) 307, 345
BseNI ACTGG 2 cut(s) 123, 231
BshFI GGCC 1 cut(s) 71
BsiHKCI CYCGRG 2 cut(s) 7, 158
BsiSI CCGG 1 cut(s) 301
BslI CCNNNNNNNGG 2 cut(s) 307, 345
BsnI GGCC 1 cut(s) 71
BsoBI CYCGRG 2 cut(s) 7, 158
Bsp1407I TGTACA 1 cut(s) 315
BspACI CCGC 2 cut(s) 128, 349
BspANI GGCC 1 cut(s) 71
BspLI GGNNCC 1 cut(s) 330
BsrGI TGTACA 1 cut(s) 315
BsrI ACTGG 2 cut(s) 123, 231
BssECI CCNNGG 1 cut(s) 324
BssT1I CCWWGG 1 cut(s) 324
Bst4CI ACNGT 2 cut(s) 210, 237
BstAUI TGTACA 1 cut(s) 315
BstC8I GCNNGC 1 cut(s) 126
BstENI CCTNNNNNAGG 1 cut(s) 343
BstF5I GGATG 1 cut(s) 295
BstSCI CCNGG 1 cut(s) 300
BstSFI CTRYAG 1 cut(s) 79
BsuRI GGCC 1 cut(s) 71
BtsCI GGATG 1 cut(s) 295
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 1 cut(s) 312
Cac8I GCNNGC 1 cut(s) 126
Cfr13I GGNCC 1 cut(s) 328
Csp6I GTAC 4 cut(s) 84, 211, 293, 316
CviJI RGCY 6 cut(s) 12, 71, 230, 254, 311, 338
CviKI_1 RGCY 6 cut(s) 12, 71, 230, 254, 311, 338
CviQI GTAC 4 cut(s) 84, 211, 293, 316
EaeI YGGCCR 1 cut(s) 69
EciI GGCGGA 2 cut(s) 143, 364
Eco130I CCWWGG 1 cut(s) 324
Eco47I GGWCC 1 cut(s) 328
Eco88I CYCGRG 2 cut(s) 7, 158
EcoNI CCTNNNNNAGG 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 328
EcoT14I CCWWGG 1 cut(s) 324
ErhI CCWWGG 1 cut(s) 324
FaiI YATR 3 cut(s) 81, 233, 314
FokI GGATG 1 cut(s) 302
HaeIII GGCC 1 cut(s) 71
HapII CCGG 1 cut(s) 301
HinfI GANTC 2 cut(s) 103, 363
HpaII CCGG 1 cut(s) 301
HphI GGTGA 1 cut(s) 196
Hpy188I TCNGA 3 cut(s) 34, 220, 261
Hpy188III TCNNGA 1 cut(s) 7
Hpy99I CGWCG 1 cut(s) 77
HpyCH4III ACNGT 2 cut(s) 210, 237
HpyCH4V TGCA 1 cut(s) 241
LmnI GCTCC 2 cut(s) 35, 303
LpnPI CCDG 4 cut(s) 104, 110, 212, 314
LweI GCATC 2 cut(s) 45, 224
MboII GAAGA 1 cut(s) 199
MfeI CAATTG 1 cut(s) 372
MluCI AATT 3 cut(s) 42, 152, 372
MmeI TCCRAC 2 cut(s) 71, 338
MnlI CCTC 2 cut(s) 339, 349
MroXI GAANNNNTTC 1 cut(s) 367
MseI TTAA 1 cut(s) 269
MspI CCGG 1 cut(s) 301
MspR9I CCNGG 1 cut(s) 302
MunI CAATTG 1 cut(s) 372
NciI CCSGG 1 cut(s) 302
NlaIV GGNNCC 1 cut(s) 330
PaeR7I CTCGAG 2 cut(s) 7, 158
PdmI GAANNNNTTC 1 cut(s) 367
PfeI GAWTC 2 cut(s) 103, 363
PpuMI RGGWCCY 1 cut(s) 328
Psp5II RGGWCCY 1 cut(s) 328
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 328
PspPPI RGGWCCY 1 cut(s) 328
PspXI VCTCGAGB 1 cut(s) 158
RsaI GTAC 4 cut(s) 85, 212, 294, 317
RsaNI GTAC 4 cut(s) 84, 211, 293, 316
SaqAI TTAA 1 cut(s) 269
Sau96I GGNCC 1 cut(s) 328
ScaI AGTACT 1 cut(s) 85
ScrFI CCNGG 1 cut(s) 302
SetI ASST 3 cut(s) 14, 186, 269
SfaNI GCATC 2 cut(s) 45, 224
SfcI CTRYAG 1 cut(s) 79
Sfr274I CTCGAG 2 cut(s) 7, 158
SinI GGWCC 1 cut(s) 328
SlaI CTCGAG 2 cut(s) 7, 158
SmlI CTYRAG 2 cut(s) 7, 158
SmoI CTYRAG 2 cut(s) 7, 158
Sse9I AATT 3 cut(s) 42, 152, 372
SsiI CCGC 2 cut(s) 128, 349
StyD4I CCNGG 1 cut(s) 300
StyI CCWWGG 1 cut(s) 324
TaaI ACNGT 2 cut(s) 210, 237
TaqI TCGA 2 cut(s) 8, 159
TasI AATT 3 cut(s) 42, 152, 372
TatI WGTACW 3 cut(s) 83, 292, 315
TfiI GAWTC 2 cut(s) 103, 363
Tru1I TTAA 1 cut(s) 269
Tru9I TTAA 1 cut(s) 269
TscAI CASTG 1 cut(s) 312
TspDTI ATGAA 1 cut(s) 293
TspRI CASTG 1 cut(s) 312
VpaK11BI GGWCC 1 cut(s) 328
XagI CCTNNNNNAGG 1 cut(s) 343
XhoI CTCGAG 2 cut(s) 7, 158
XmnI GAANNNNTTC 1 cut(s) 367
ZrmI AGTACT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.