Rh3CG321200

Beta-catenin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0009600
Physical Location & Seq
Forward (+)
34460751 .. 34482667
21917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG321200.1

Sequence Viewer

Length: 858 bp
ATGTCTTTTGCCTACAACAATAAATCCTCCGCACCTCAAAATGCAGACACTCTTGCCTATCTTCAAAGTAGTAACACCGAAAGTAGTCAGACTCTGCATGTCCTACTACTTAAAGGAATTAAAAATGTAGTTTCTGCTGCAACATTAGAACTGAAACAGATGCAAGAAAAATTAATTTCGGCTGTACATCTCACAATCAAACGCCCAAATGAGGACGACCTCATCCCCATAAGCAGTGAGAAGGAATTAGAAAAACTACTCAACCATAACCAACCAAAGGCTGCGACGCTGCTCATGGGAGAAATTGAGGTCTCCTTTCATTTACCCGAAGATCTACCACTGCATGAGTTAGATCTTGAGAAGACGGCCTTTGCAGCTTTTATGGGTAAGGCAAGTGCTGCTGCCTTCTCTTTTCTTAATTTACAAAGTGGAATTCTGAGGGGTTCTAGAAGGGAGAGACTGTTGAGCAAGTTTGTGGAAAATGAATGTGAAAAGATAGATCGGCTTATGGAACTTTATATGAGATATTTGAATAGAGTTAAAGCTGAAACTGACCGAATTGACCAGCTTGATCTTGATGATTTAGAGATGGATGAAGAGGAAATATACATTCGGAAGCTTGAAGCTGGACTTTATACCCTTCAGTTGATTGCTGTTATTTTGGGTCATCTTTGGTGCTCTGAGCATCCTCAAATGAGAGGAAGAATTGAACTACTTCTCAAGCAGCAAAAGCTTACTAAGAAGGATGTTAAGGATATACTTCAGGAGTATCACGACAACATCGGTGATATGGAAGGAGCGGAAGAAAAAGAGCGATCACAGGCAAAGATTCAAAAGTTCATCTCAGCTTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
CTNNBL

Protein Analysis

285

Amino Acids

32.62

Weight (kDa)

5.33

Isoelectric Point (pI)

50.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTNNBL PF08216 141 - 255 1.3e-28 Catenin-beta-like, Arm-motif containing nuclear
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 800
AciI CCGC 2 cut(s) 30, 800
AcsI RAATTY 1 cut(s) 432
AcuI CTGAAG 2 cut(s) 626, 746
AfaI GTAC 1 cut(s) 186
AfiI CCNNNNNNNGG 2 cut(s) 211, 277
AgsI TTSAA 5 cut(s) 65, 532, 623, 710, 833
AluBI AGCT 7 cut(s) 377, 545, 568, 619, 626, 733, 848
AluI AGCT 7 cut(s) 377, 545, 568, 619, 626, 733, 848
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 2 cut(s) 316, 451
AlwNI CAGNNNCTG 1 cut(s) 94
AoxI GGCC 1 cut(s) 366
ApeKI GCWGC 7 cut(s) 137, 281, 289, 374, 398, 401, 724
ApoI RAATTY 1 cut(s) 432
AseI ATTAAT 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 714
AsuHPI GGTGA 1 cut(s) 797
BbsI GAAGAC 1 cut(s) 368
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 7 cut(s) 124, 268, 276, 385, 386, 388, 736
BccI CCATC 1 cut(s) 583
BceAI ACGGC 1 cut(s) 381
BcoDI GTCTC 2 cut(s) 316, 451
BfaI CTAG 1 cut(s) 447
BglII AGATCT 2 cut(s) 331, 352
BisI GCNGC 7 cut(s) 138, 282, 290, 375, 399, 402, 725
BlsI GCNGC 7 cut(s) 139, 283, 291, 376, 400, 403, 726
BmsI GCATC 2 cut(s) 150, 694
BpiI GAAGAC 1 cut(s) 368
BpuEI CTTGAG 2 cut(s) 377, 704
BsaI GGTCTC 1 cut(s) 316
BsaXI ACNNNNNCTCC 2 cut(s) 446, 476
Bsc4I CCNNNNNNNGG 2 cut(s) 211, 277
BseGI GGATG 4 cut(s) 222, 598, 685, 751
BseLI CCNNNNNNNGG 2 cut(s) 211, 277
BseMII CTCAG 3 cut(s) 428, 672, 858
BseXI GCAGC 7 cut(s) 124, 268, 276, 385, 386, 388, 736
BshFI GGCC 1 cut(s) 368
BsiHKAI GWGCWC 1 cut(s) 680
BslI CCNNNNNNNGG 2 cut(s) 211, 277
BsmAI GTCTC 2 cut(s) 316, 451
BsnI GGCC 1 cut(s) 368
Bso31I GGTCTC 1 cut(s) 316
Bsp1286I GDGCHC 1 cut(s) 680
Bsp1407I TGTACA 1 cut(s) 184
Bsp143I GATC 5 cut(s) 331, 352, 499, 571, 815
BspACI CCGC 2 cut(s) 30, 800
BspANI GGCC 1 cut(s) 368
BspCNI CTCAG 3 cut(s) 429, 673, 857
BspTNI GGTCTC 1 cut(s) 316
BsrBI CCGCTC 1 cut(s) 800
BsrGI TGTACA 1 cut(s) 184
BssMI GATC 5 cut(s) 331, 352, 499, 571, 815
Bst4CI ACNGT 1 cut(s) 462
Bst6I CTCTTC 1 cut(s) 591
BstAPI GCANNNNNTGC 1 cut(s) 398
BstAUI TGTACA 1 cut(s) 184
BstDEI CTNAG 4 cut(s) 437, 681, 738, 844
BstF5I GGATG 4 cut(s) 222, 598, 685, 751
BstKTI GATC 5 cut(s) 334, 355, 502, 574, 818
BstMAI GTCTC 2 cut(s) 316, 451
BstMBI GATC 5 cut(s) 331, 352, 499, 571, 815
BstMWI GCNNNNNNNGC 3 cut(s) 374, 398, 730
BstNSI RCATGY 1 cut(s) 101
BstV1I GCAGC 7 cut(s) 124, 268, 276, 385, 386, 388, 736
BstV2I GAAGAC 1 cut(s) 368
BstX2I RGATCY 2 cut(s) 331, 352
BstYI RGATCY 2 cut(s) 331, 352
BsuRI GGCC 1 cut(s) 368
BtsCI GGATG 4 cut(s) 222, 598, 685, 751
BtsI GCAGTG 2 cut(s) 241, 338
BtsIMutI CAGTG 2 cut(s) 241, 338
CaiI CAGNNNCTG 1 cut(s) 94
CseI GACGC 1 cut(s) 295
Csp6I GTAC 1 cut(s) 185
CviAII CATG 3 cut(s) 98, 295, 344
CviQI GTAC 1 cut(s) 185
DdeI CTNAG 4 cut(s) 437, 681, 738, 844
DpnI GATC 5 cut(s) 333, 354, 501, 573, 817
DpnII GATC 5 cut(s) 331, 352, 499, 571, 815
Eam1104I CTCTTC 1 cut(s) 591
EarI CTCTTC 1 cut(s) 591
Eco31I GGTCTC 1 cut(s) 316
Eco57I CTGAAG 2 cut(s) 626, 746
EcoRI GAATTC 1 cut(s) 432
FaeI CATG 3 cut(s) 101, 298, 347
FalI AAGNNNNNCTT 4 cut(s) 353, 385, 615, 647
FatI CATG 3 cut(s) 97, 294, 343
Fnu4HI GCNGC 7 cut(s) 138, 282, 290, 375, 399, 402, 725
FokI GGATG 4 cut(s) 209, 605, 672, 758
Fsp4HI GCNGC 7 cut(s) 138, 282, 290, 375, 399, 402, 725
FspBI CTAG 1 cut(s) 447
GluI GCNGC 7 cut(s) 138, 282, 290, 375, 399, 402, 725
HaeIII GGCC 1 cut(s) 368
HgaI GACGC 1 cut(s) 295
Hin1II CATG 3 cut(s) 101, 298, 347
HindIII AAGCTT 2 cut(s) 617, 731
HinfI GANTC 2 cut(s) 91, 829
HphI GGTGA 1 cut(s) 797
Hpy188I TCNGA 4 cut(s) 90, 438, 615, 682
Hpy188III TCNNGA 5 cut(s) 356, 447, 575, 764, 773
Hpy99I CGWCG 1 cut(s) 289
HpyAV CCTTC 6 cut(s) 235, 415, 444, 650, 736, 788
HpyCH4III ACNGT 1 cut(s) 462
HpyCH4V TGCA 6 cut(s) 44, 97, 140, 163, 343, 374
HpyF10VI GCNNNNNNNGC 3 cut(s) 374, 398, 730
HpyF3I CTNAG 4 cut(s) 437, 681, 738, 844
Hsp92II CATG 3 cut(s) 101, 298, 347
Kzo9I GATC 5 cut(s) 331, 352, 499, 571, 815
LmnI GCTCC 1 cut(s) 797
LpnPI CCDG 4 cut(s) 578, 612, 749, 806
Lsp1109I GCAGC 7 cut(s) 124, 268, 276, 385, 386, 388, 736
LweI GCATC 2 cut(s) 150, 694
MaeI CTAG 1 cut(s) 447
MaeIII GTNAC 1 cut(s) 71
MalI GATC 5 cut(s) 333, 354, 501, 573, 817
MbiI CCGCTC 1 cut(s) 800
MboI GATC 5 cut(s) 331, 352, 499, 571, 815
MboII GAAGA 6 cut(s) 53, 341, 373, 608, 714, 815
MflI RGATCY 2 cut(s) 331, 352
MhlI GDGCHC 1 cut(s) 680
MluCI AATT 9 cut(s) 117, 170, 174, 245, 303, 418, 432, 558, 705
MlyI GAGTC 1 cut(s) 85
MnlI CCTC 9 cut(s) 37, 45, 205, 230, 301, 432, 592, 692, 699
MroXI GAANNNNTTC 1 cut(s) 714
MseI TTAA 6 cut(s) 111, 120, 173, 417, 540, 750
MwoI GCNNNNNNNGC 3 cut(s) 374, 398, 730
NdeII GATC 5 cut(s) 331, 352, 499, 571, 815
NlaIII CATG 3 cut(s) 101, 298, 347
NspI RCATGY 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 714
PfeI GAWTC 1 cut(s) 829
PkrI GCNGC 7 cut(s) 139, 283, 291, 376, 400, 403, 726
PleI GAGTC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 85
PshBI ATTAAT 1 cut(s) 173
PstNI CAGNNNCTG 1 cut(s) 94
PsuI RGATCY 2 cut(s) 331, 352
RsaI GTAC 1 cut(s) 186
RsaNI GTAC 1 cut(s) 185
SaqAI TTAA 6 cut(s) 111, 120, 173, 417, 540, 750
SatI GCNGC 7 cut(s) 138, 282, 290, 375, 399, 402, 725
Sau3AI GATC 5 cut(s) 331, 352, 499, 571, 815
SchI GAGTC 1 cut(s) 85
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 2 cut(s) 150, 694
SmlI CTYRAG 2 cut(s) 356, 719
SmoI CTYRAG 2 cut(s) 356, 719
Sse9I AATT 9 cut(s) 117, 170, 174, 245, 303, 418, 432, 558, 705
SsiI CCGC 2 cut(s) 30, 800
SspMI CTAG 1 cut(s) 447
TaaI ACNGT 1 cut(s) 462
TaqII GACCGA 1 cut(s) 570
TasI AATT 9 cut(s) 117, 170, 174, 245, 303, 418, 432, 558, 705
TatI WGTACW 1 cut(s) 184
TfiI GAWTC 1 cut(s) 829
Tru1I TTAA 6 cut(s) 111, 120, 173, 417, 540, 750
Tru9I TTAA 6 cut(s) 111, 120, 173, 417, 540, 750
TscAI CASTG 2 cut(s) 241, 345
TseI GCWGC 7 cut(s) 137, 281, 289, 374, 398, 401, 724
TspDTI ATGAA 4 cut(s) 308, 498, 609, 829
TspRI CASTG 2 cut(s) 241, 345
VspI ATTAAT 1 cut(s) 173
XapI RAATTY 1 cut(s) 432
XbaI TCTAGA 1 cut(s) 446
XceI RCATGY 1 cut(s) 101
XmnI GAANNNNTTC 1 cut(s) 714
XspI CTAG 1 cut(s) 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.