Rh3CG024500

60S ribosomal protein L18a-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
1691707 .. 1692748
1042 bp
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UTR
Exon/CDS
Intron
Rh3CG024500.1

Sequence Viewer

Length: 384 bp
ATGACAGAAGCACCATTACCTCCTCTCATATCCAACAACAACAACACCACTGGGATCACATTACAGGATCATCATGGTGGAGACCATGATAAGAAAGAAATGGTGAAACTCGAAGTTGATGGAGGAGGAGACTCGGCTTTGGTAGAGGCTAGATTCTCTGATGGGGTGTATGATAAGCCTCTATCATGTTTTGGTTGTGGCATTGGATGGTTCTCATTTCTATTGGGATTTGCTTTTCCTCCACTCTGGTACTATGCAACAGTGCTTTACTTTGGGAATTATCTTAAAGACCCTAGAGAGCGACCCGGCCTTGCAGCATCTGCAATTGCAGCTTTGATTTGCTCAGTCGTCTTGGTTGTCCTGCTTTTCTCACTTTTCTCTTAG

Protein Analysis

127

Amino Acids

13.79

Weight (kDa)

4.92

Isoelectric Point (pI)

28.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016357)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 62, 75
AfaI GTAC 1 cut(s) 251
AluBI AGCT 1 cut(s) 332
AluI AGCT 1 cut(s) 332
Alw26I GTCTC 2 cut(s) 75, 123
AlwI GGATC 2 cut(s) 62, 75
AlwNI CAGNNNCTG 1 cut(s) 320
AoxI GGCC 1 cut(s) 307
ApeKI GCWGC 2 cut(s) 314, 329
AsuC2I CCSGG 1 cut(s) 306
AsuHPI GGTGA 1 cut(s) 115
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbvI GCAGC 2 cut(s) 326, 341
BccI CCATC 3 cut(s) 113, 155, 201
BcnI CCSGG 1 cut(s) 306
BcoDI GTCTC 2 cut(s) 75, 123
BfaI CTAG 2 cut(s) 150, 294
BisI GCNGC 2 cut(s) 315, 330
BlsI GCNGC 2 cut(s) 316, 331
Bme1390I CCNGG 1 cut(s) 306
BmrFI CCNGG 1 cut(s) 306
BmrI ACTGGG 1 cut(s) 60
BmsI GCATC 1 cut(s) 326
BmuI ACTGGG 1 cut(s) 60
BpuMI CCSGG 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 55
BseGI GGATG 1 cut(s) 212
BseMII CTCAG 1 cut(s) 357
BseNI ACTGG 1 cut(s) 55
BseRI GAGGAG 3 cut(s) 12, 138, 141
BseXI GCAGC 2 cut(s) 326, 341
BshFI GGCC 1 cut(s) 309
BsiSI CCGG 1 cut(s) 306
BsmAI GTCTC 2 cut(s) 75, 123
BsnI GGCC 1 cut(s) 309
Bso31I GGTCTC 1 cut(s) 75
Bsp143I GATC 2 cut(s) 54, 67
BspANI GGCC 1 cut(s) 309
BspCNI CTCAG 1 cut(s) 356
BspPI GGATC 2 cut(s) 62, 75
BspTNI GGTCTC 1 cut(s) 75
BsrI ACTGG 1 cut(s) 55
BssMI GATC 2 cut(s) 54, 67
Bst4CI ACNGT 1 cut(s) 262
BstAPI GCANNNNNTGC 1 cut(s) 320
BstDEI CTNAG 2 cut(s) 343, 381
BstF5I GGATG 1 cut(s) 212
BstKTI GATC 2 cut(s) 57, 70
BstMAI GTCTC 2 cut(s) 75, 123
BstMBI GATC 2 cut(s) 54, 67
BstMWI GCNNNNNNNGC 2 cut(s) 320, 329
BstSCI CCNGG 1 cut(s) 304
BstV1I GCAGC 2 cut(s) 326, 341
BsuRI GGCC 1 cut(s) 309
BtsCI GGATG 1 cut(s) 212
BtsIMutI CAGTG 2 cut(s) 48, 267
CaiI CAGNNNCTG 1 cut(s) 320
Csp6I GTAC 1 cut(s) 250
CviAII CATG 3 cut(s) 74, 86, 186
CviJI RGCY 5 cut(s) 137, 149, 178, 309, 332
CviKI_1 RGCY 5 cut(s) 137, 149, 178, 309, 332
CviQI GTAC 1 cut(s) 250
DdeI CTNAG 2 cut(s) 343, 381
DpnI GATC 2 cut(s) 56, 69
DpnII GATC 2 cut(s) 54, 67
Eco31I GGTCTC 1 cut(s) 75
FaeI CATG 3 cut(s) 77, 89, 189
FaiI YATR 6 cut(s) 29, 75, 87, 171, 187, 255
FatI CATG 3 cut(s) 73, 85, 185
Fnu4HI GCNGC 2 cut(s) 315, 330
FokI GGATG 1 cut(s) 219
Fsp4HI GCNGC 2 cut(s) 315, 330
FspBI CTAG 2 cut(s) 150, 294
GluI GCNGC 2 cut(s) 315, 330
HaeIII GGCC 1 cut(s) 309
HapII CCGG 1 cut(s) 306
Hin1II CATG 3 cut(s) 77, 89, 189
HinfI GANTC 2 cut(s) 131, 153
HpaII CCGG 1 cut(s) 306
HphI GGTGA 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 160
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4V TGCA 4 cut(s) 257, 314, 323, 329
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 329
HpyF3I CTNAG 2 cut(s) 343, 381
Hsp92II CATG 3 cut(s) 77, 89, 189
Kzo9I GATC 2 cut(s) 54, 67
LpnPI CCDG 5 cut(s) 36, 50, 232, 319, 374
Lsp1109I GCAGC 2 cut(s) 326, 341
LweI GCATC 1 cut(s) 326
MaeI CTAG 2 cut(s) 150, 294
MalI GATC 2 cut(s) 56, 69
MboI GATC 2 cut(s) 54, 67
MfeI CAATTG 1 cut(s) 324
MluCI AATT 2 cut(s) 277, 324
MlyI GAGTC 1 cut(s) 125
MmeI TCCRAC 1 cut(s) 57
MnlI CCTC 7 cut(s) 30, 33, 116, 119, 139, 189, 249
MseI TTAA 1 cut(s) 285
MslI CAYNNNNRTG 1 cut(s) 75
MspI CCGG 1 cut(s) 306
MspR9I CCNGG 1 cut(s) 306
MunI CAATTG 1 cut(s) 324
MwoI GCNNNNNNNGC 2 cut(s) 320, 329
NciI CCSGG 1 cut(s) 306
NdeII GATC 2 cut(s) 54, 67
NlaIII CATG 3 cut(s) 77, 89, 189
NmeAIII GCCGAG 1 cut(s) 113
PfeI GAWTC 1 cut(s) 153
PkrI GCNGC 2 cut(s) 316, 331
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
PstNI CAGNNNCTG 1 cut(s) 320
RsaI GTAC 1 cut(s) 251
RsaNI GTAC 1 cut(s) 250
RseI CAYNNNNRTG 1 cut(s) 75
SaqAI TTAA 1 cut(s) 285
SatI GCNGC 2 cut(s) 315, 330
Sau3AI GATC 2 cut(s) 54, 67
SchI GAGTC 1 cut(s) 125
ScrFI CCNGG 1 cut(s) 306
SetI ASST 2 cut(s) 22, 334
SfaNI GCATC 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 75
Sse9I AATT 2 cut(s) 277, 324
SspMI CTAG 2 cut(s) 150, 294
StyD4I CCNGG 1 cut(s) 304
TaaI ACNGT 1 cut(s) 262
TaqI TCGA 1 cut(s) 111
TasI AATT 2 cut(s) 277, 324
TfiI GAWTC 1 cut(s) 153
Tru1I TTAA 1 cut(s) 285
Tru9I TTAA 1 cut(s) 285
TscAI CASTG 2 cut(s) 55, 267
TseI GCWGC 2 cut(s) 314, 329
TspRI CASTG 2 cut(s) 55, 267
XspI CTAG 2 cut(s) 150, 294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.