Rh4AG223000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
52271028 .. 52271448
421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG223000.1

Sequence Viewer

Length: 180 bp
ATGGGAGAGAAACTCAGCAAGATGACCCGACCCGAAACCCAGGCAGAACCAAAACCCAGTGACCAGTCGCAGCCGCCACCACCGCCTCTCCATTCGGAGGTAGAAGACGACGATGAGAACGTGAAGCAGCTCAAGGAGTGTTCTGCTCTCTATCTTTCCTTACAGAAGTTCAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

59

Amino Acids

6.68

Weight (kDa)

4.97

Isoelectric Point (pI)

67.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 74, 83
AfiI CCNNNNNNNGG 1 cut(s) 97
AgsI TTSAA 1 cut(s) 172
AjnI CCWGG 1 cut(s) 39
AluBI AGCT 1 cut(s) 130
AluI AGCT 1 cut(s) 130
ApeKI GCWGC 2 cut(s) 70, 127
BbsI GAAGAC 1 cut(s) 111
BbvI GCAGC 2 cut(s) 82, 139
BciT130I CCWGG 1 cut(s) 41
BisI GCNGC 3 cut(s) 71, 74, 128
BlsI GCNGC 3 cut(s) 72, 75, 129
Bme1390I CCNGG 1 cut(s) 41
BmrFI CCNGG 1 cut(s) 41
BmrI ACTGGG 1 cut(s) 51
BmuI ACTGGG 1 cut(s) 51
BpiI GAAGAC 1 cut(s) 111
BplI GAGNNNNNCTC 1 cut(s) 29
BpuEI CTTGAG 1 cut(s) 116
BsaJI CCNNGG 1 cut(s) 39
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 1 cut(s) 97
Bse1I ACTGG 2 cut(s) 57, 64
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 1 cut(s) 39
BseLI CCNNNNNNNGG 1 cut(s) 97
BseMII CTCAG 1 cut(s) 28
BseNI ACTGG 2 cut(s) 57, 64
BseXI GCAGC 2 cut(s) 82, 139
BslI CCNNNNNNNGG 1 cut(s) 97
BspACI CCGC 2 cut(s) 74, 83
BspCNI CTCAG 1 cut(s) 27
BsrI ACTGG 2 cut(s) 57, 64
BssECI CCNNGG 1 cut(s) 39
Bst2UI CCWGG 1 cut(s) 41
BstDEI CTNAG 1 cut(s) 14
BstMWI GCNNNNNNNGC 1 cut(s) 82
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 39
BstV1I GCAGC 2 cut(s) 82, 139
BstV2I GAAGAC 1 cut(s) 111
BtsIMutI CAGTG 1 cut(s) 64
CviJI RGCY 3 cut(s) 73, 130, 175
CviKI_1 RGCY 3 cut(s) 73, 130, 175
DdeI CTNAG 1 cut(s) 14
EcoRII CCWGG 1 cut(s) 39
Fnu4HI GCNGC 3 cut(s) 71, 74, 128
Fsp4HI GCNGC 3 cut(s) 71, 74, 128
GluI GCNGC 3 cut(s) 71, 74, 128
Hpy188I TCNGA 1 cut(s) 97
Hpy99I CGWCG 1 cut(s) 113
HpyCH4IV ACGT 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 1 cut(s) 82
HpyF3I CTNAG 1 cut(s) 14
HpySE526I ACGT 1 cut(s) 120
LpnPI CCDG 4 cut(s) 26, 53, 70, 77
Lsp1109I GCAGC 2 cut(s) 82, 139
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 1 cut(s) 59
MboII GAAGA 1 cut(s) 116
MnlI CCTC 2 cut(s) 91, 96
MspR9I CCNGG 1 cut(s) 41
MvaI CCWGG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 82
NmuCI GTSAC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PkrI GCNGC 3 cut(s) 72, 75, 129
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
SatI GCNGC 3 cut(s) 71, 74, 128
ScrFI CCNGG 1 cut(s) 41
SetI ASST 3 cut(s) 102, 123, 132
SgeI CNNG 9 cut(s) 31, 39, 44, 52, 53, 69, 76, 133, 145
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SsiI CCGC 2 cut(s) 74, 83
StyD4I CCNGG 1 cut(s) 39
TaiI ACGT 1 cut(s) 123
TauI GCSGC 1 cut(s) 76
TscAI CASTG 1 cut(s) 64
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 2 cut(s) 70, 127
Tsp45I GTSAC 1 cut(s) 59
TspRI CASTG 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.