DNA-directed primase polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom1755g00050 |
| rosa_laevigata | RLG00000008413 |
| rosa_samantha | Rh1BG099400 Rh1DG118500 Rh3CG254500 Rh4AG142300 Rh4AG301300 Rh4BG139700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 632 |
| AcsI | RAATTY | 1 cut(s) | 565 |
| AcuI | CTGAAG | 1 cut(s) | 450 |
| AfaI | GTAC | 3 cut(s) | 144, 186, 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 616 |
| AflIII | ACRYGT | 1 cut(s) | 493 |
| AgsI | TTSAA | 5 cut(s) | 83, 295, 362, 374, 588 |
| AjnI | CCWGG | 2 cut(s) | 285, 635 |
| AleI | CACNNNNGTG | 2 cut(s) | 57, 626 |
| AluBI | AGCT | 3 cut(s) | 489, 591, 659 |
| AluI | AGCT | 3 cut(s) | 489, 591, 659 |
| ApoI | RAATTY | 1 cut(s) | 565 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 249, 583 |
| AsuHPI | GGTGA | 3 cut(s) | 227, 502, 599 |
| BauI | CACGAG | 1 cut(s) | 20 |
| BbsI | GAAGAC | 1 cut(s) | 476 |
| BccI | CCATC | 1 cut(s) | 545 |
| BceAI | ACGGC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 2 cut(s) | 287, 637 |
| BfmI | CTRYAG | 1 cut(s) | 594 |
| Bme1390I | CCNGG | 2 cut(s) | 287, 637 |
| BmiI | GGNNCC | 1 cut(s) | 73 |
| BmrFI | CCNGG | 2 cut(s) | 287, 637 |
| BoxI | GACNNNNGTC | 1 cut(s) | 603 |
| BpiI | GAAGAC | 1 cut(s) | 476 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 151, 183, 506, 538 |
| BpmI | CTGGAG | 1 cut(s) | 308 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 212, 242 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 616 |
| BseBI | CCWGG | 2 cut(s) | 287, 637 |
| BseGI | GGATG | 1 cut(s) | 556 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 616 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 616 |
| BsmI | GAATGC | 1 cut(s) | 462 |
| Bsp143I | GATC | 2 cut(s) | 49, 337 |
| BspCNI | CTCAG | 1 cut(s) | 150 |
| BspLI | GGNNCC | 1 cut(s) | 73 |
| BspMAI | CTGCAG | 1 cut(s) | 598 |
| BssMI | GATC | 2 cut(s) | 49, 337 |
| BssNAI | GTATAC | 1 cut(s) | 633 |
| BssSI | CACGAG | 1 cut(s) | 20 |
| Bst1107I | GTATAC | 1 cut(s) | 633 |
| Bst2BI | CACGAG | 1 cut(s) | 20 |
| Bst2UI | CCWGG | 2 cut(s) | 287, 637 |
| Bst4CI | ACNGT | 1 cut(s) | 189 |
| Bst6I | CTCTTC | 1 cut(s) | 174 |
| BstDEI | CTNAG | 1 cut(s) | 158 |
| BstF5I | GGATG | 1 cut(s) | 556 |
| BstKTI | GATC | 2 cut(s) | 52, 340 |
| BstMBI | GATC | 2 cut(s) | 49, 337 |
| BstNI | CCWGG | 2 cut(s) | 287, 637 |
| BstNSI | RCATGY | 1 cut(s) | 497 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 603 |
| BstSCI | CCNGG | 2 cut(s) | 285, 635 |
| BstSFI | CTRYAG | 1 cut(s) | 594 |
| BstV2I | GAAGAC | 1 cut(s) | 476 |
| BstZ17I | GTATAC | 1 cut(s) | 633 |
| BtsCI | GGATG | 1 cut(s) | 556 |
| BtsI | GCAGTG | 1 cut(s) | 621 |
| BtsIMutI | CAGTG | 1 cut(s) | 621 |
| Csp6I | GTAC | 3 cut(s) | 143, 185, 208 |
| CviAII | CATG | 3 cut(s) | 267, 397, 494 |
| CviJI | RGCY | 4 cut(s) | 365, 489, 591, 659 |
| CviKI_1 | RGCY | 4 cut(s) | 365, 489, 591, 659 |
| CviQI | GTAC | 3 cut(s) | 143, 185, 208 |
| DdeI | CTNAG | 1 cut(s) | 158 |
| DpnI | GATC | 2 cut(s) | 51, 339 |
| DpnII | GATC | 2 cut(s) | 49, 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 174 |
| Eco32I | GATATC | 1 cut(s) | 531 |
| Eco57I | CTGAAG | 1 cut(s) | 450 |
| EcoRII | CCWGG | 2 cut(s) | 285, 635 |
| EcoRV | GATATC | 1 cut(s) | 531 |
| FaeI | CATG | 3 cut(s) | 270, 400, 497 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 354, 386 |
| FatI | CATG | 3 cut(s) | 266, 396, 493 |
| FblI | GTMKAC | 1 cut(s) | 632 |
| FokI | GGATG | 1 cut(s) | 563 |
| GsuI | CTGGAG | 1 cut(s) | 308 |
| Hin1II | CATG | 3 cut(s) | 270, 400, 497 |
| HinfI | GANTC | 4 cut(s) | 221, 419, 584, 640 |
| HphI | GGTGA | 3 cut(s) | 227, 502, 599 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 62, 263, 619, 633 |
| Hpy188I | TCNGA | 2 cut(s) | 159, 468 |
| Hpy188III | TCNNGA | 3 cut(s) | 47, 173, 254 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 62, 263, 619, 633 |
| HpyAV | CCTTC | 2 cut(s) | 62, 98 |
| HpyCH4III | ACNGT | 1 cut(s) | 189 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 503, 539, 596 |
| HpyF3I | CTNAG | 1 cut(s) | 158 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| Hsp92II | CATG | 3 cut(s) | 270, 400, 497 |
| Kzo9I | GATC | 2 cut(s) | 49, 337 |
| LpnPI | CCDG | 7 cut(s) | 190, 239, 272, 299, 374, 622, 649 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MaeIII | GTNAC | 3 cut(s) | 233, 508, 605 |
| MalI | GATC | 2 cut(s) | 51, 339 |
| MboI | GATC | 2 cut(s) | 49, 337 |
| MboII | GAAGA | 4 cut(s) | 119, 161, 481, 567 |
| MluCI | AATT | 4 cut(s) | 199, 213, 453, 565 |
| MlyI | GAGTC | 1 cut(s) | 230 |
| MnlI | CCTC | 4 cut(s) | 153, 250, 433, 540 |
| MroXI | GAANNNNTTC | 2 cut(s) | 249, 583 |
| MseI | TTAA | 4 cut(s) | 198, 344, 452, 480 |
| MslI | CAYNNNNRTG | 4 cut(s) | 24, 57, 498, 626 |
| MspR9I | CCNGG | 2 cut(s) | 287, 637 |
| Mva1269I | GAATGC | 1 cut(s) | 462 |
| MvaI | CCWGG | 2 cut(s) | 287, 637 |
| NdeII | GATC | 2 cut(s) | 49, 337 |
| NlaIII | CATG | 3 cut(s) | 270, 400, 497 |
| NlaIV | GGNNCC | 1 cut(s) | 73 |
| NmuCI | GTSAC | 3 cut(s) | 233, 508, 605 |
| NspI | RCATGY | 1 cut(s) | 497 |
| OliI | CACNNNNGTG | 2 cut(s) | 57, 626 |
| PciI | ACATGT | 1 cut(s) | 493 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 649 |
| PctI | GAATGC | 1 cut(s) | 462 |
| PdmI | GAANNNNTTC | 2 cut(s) | 249, 583 |
| PfeI | GAWTC | 3 cut(s) | 419, 584, 640 |
| PleI | GAGTC | 1 cut(s) | 229 |
| PpsI | GAGTC | 1 cut(s) | 229 |
| PscI | ACATGT | 1 cut(s) | 493 |
| PshAI | GACNNNNGTC | 1 cut(s) | 603 |
| Psp6I | CCWGG | 2 cut(s) | 285, 635 |
| PspGI | CCWGG | 2 cut(s) | 285, 635 |
| PspN4I | GGNNCC | 1 cut(s) | 73 |
| PstI | CTGCAG | 1 cut(s) | 598 |
| RsaI | GTAC | 3 cut(s) | 144, 186, 209 |
| RsaNI | GTAC | 3 cut(s) | 143, 185, 208 |
| RseI | CAYNNNNRTG | 4 cut(s) | 24, 57, 498, 626 |
| SaqAI | TTAA | 4 cut(s) | 198, 344, 452, 480 |
| Sau3AI | GATC | 2 cut(s) | 49, 337 |
| SchI | GAGTC | 1 cut(s) | 230 |
| ScrFI | CCNGG | 2 cut(s) | 287, 637 |
| SfcI | CTRYAG | 1 cut(s) | 594 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 24, 57, 498, 626 |
| Sse9I | AATT | 4 cut(s) | 199, 213, 453, 565 |
| StyD4I | CCNGG | 2 cut(s) | 285, 635 |
| TaaI | ACNGT | 1 cut(s) | 189 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TasI | AATT | 4 cut(s) | 199, 213, 453, 565 |
| TatI | WGTACW | 2 cut(s) | 142, 184 |
| TfiI | GAWTC | 3 cut(s) | 419, 584, 640 |
| Tru1I | TTAA | 4 cut(s) | 198, 344, 452, 480 |
| Tru9I | TTAA | 4 cut(s) | 198, 344, 452, 480 |
| TscAI | CASTG | 1 cut(s) | 628 |
| TseFI | GTSAC | 3 cut(s) | 233, 508, 605 |
| Tsp45I | GTSAC | 3 cut(s) | 233, 508, 605 |
| TspDTI | ATGAA | 1 cut(s) | 342 |
| TspGWI | ACGGA | 1 cut(s) | 541 |
| TspRI | CASTG | 1 cut(s) | 628 |
| XapI | RAATTY | 1 cut(s) | 565 |
| XceI | RCATGY | 1 cut(s) | 497 |
| XmiI | GTMKAC | 1 cut(s) | 632 |
| XmnI | GAANNNNTTC | 2 cut(s) | 249, 583 |