No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom1755g00050 |
| rosa_laevigata | RLG00000008413 |
| rosa_samantha | Rh1BG099400 Rh1DG118500 Rh3CG254500 Rh4AG142300 Rh4AG301300 Rh4BG139700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 107 |
| AcuI | CTGAAG | 1 cut(s) | 276 |
| AdeI | CACNNNGTG | 2 cut(s) | 64, 332 |
| AgsI | TTSAA | 3 cut(s) | 185, 308, 344 |
| AluBI | AGCT | 3 cut(s) | 138, 188, 200 |
| AluI | AGCT | 3 cut(s) | 138, 188, 200 |
| Alw21I | GWGCWC | 1 cut(s) | 289 |
| Alw26I | GTCTC | 1 cut(s) | 245 |
| AlwI | GGATC | 1 cut(s) | 107 |
| AoxI | GGCC | 1 cut(s) | 27 |
| ApeKI | GCWGC | 2 cut(s) | 67, 227 |
| AsuHPI | GGTGA | 1 cut(s) | 305 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 65, 97 |
| Bbv12I | GWGCWC | 1 cut(s) | 289 |
| BbvI | GCAGC | 2 cut(s) | 54, 214 |
| BccI | CCATC | 1 cut(s) | 293 |
| BceAI | ACGGC | 1 cut(s) | 349 |
| BcoDI | GTCTC | 1 cut(s) | 245 |
| BfaI | CTAG | 3 cut(s) | 110, 329, 379 |
| BfmI | CTRYAG | 1 cut(s) | 68 |
| BisI | GCNGC | 2 cut(s) | 68, 228 |
| BlsI | GCNGC | 2 cut(s) | 69, 229 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 116, 148 |
| BpmI | CTGGAG | 1 cut(s) | 118 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 271, 301 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseRI | GAGGAG | 1 cut(s) | 59 |
| BseXI | GCAGC | 2 cut(s) | 54, 214 |
| BsgI | GTGCAG | 2 cut(s) | 213, 354 |
| BshFI | GGCC | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 1 cut(s) | 289 |
| BsmAI | GTCTC | 1 cut(s) | 245 |
| BsnI | GGCC | 1 cut(s) | 29 |
| Bsp1286I | GDGCHC | 1 cut(s) | 289 |
| Bsp143I | GATC | 2 cut(s) | 112, 310 |
| BspANI | GGCC | 1 cut(s) | 29 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BspMAI | CTGCAG | 1 cut(s) | 72 |
| BspPI | GGATC | 1 cut(s) | 107 |
| BssMI | GATC | 2 cut(s) | 112, 310 |
| Bst4CI | ACNGT | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 1 cut(s) | 68 |
| BstDEI | CTNAG | 1 cut(s) | 249 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstKTI | GATC | 2 cut(s) | 115, 313 |
| BstMAI | GTCTC | 1 cut(s) | 245 |
| BstMBI | GATC | 2 cut(s) | 112, 310 |
| BstSFI | CTRYAG | 1 cut(s) | 68 |
| BstV1I | GCAGC | 2 cut(s) | 54, 214 |
| BstX2I | RGATCY | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 29 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| CviAII | CATG | 1 cut(s) | 374 |
| CviJI | RGCY | 4 cut(s) | 29, 138, 188, 200 |
| CviKI_1 | RGCY | 4 cut(s) | 29, 138, 188, 200 |
| DdeI | CTNAG | 1 cut(s) | 249 |
| DpnI | GATC | 2 cut(s) | 114, 312 |
| DpnII | GATC | 2 cut(s) | 112, 310 |
| DraIII | CACNNNGTG | 2 cut(s) | 64, 332 |
| Eam1104I | CTCTTC | 1 cut(s) | 68 |
| EarI | CTCTTC | 1 cut(s) | 68 |
| Eco57I | CTGAAG | 1 cut(s) | 276 |
| FaeI | CATG | 1 cut(s) | 377 |
| FaiI | YATR | 5 cut(s) | 9, 179, 225, 234, 375 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 14, 46, 300, 332 |
| FatI | CATG | 1 cut(s) | 373 |
| Fnu4HI | GCNGC | 2 cut(s) | 68, 228 |
| FokI | GGATG | 1 cut(s) | 311 |
| Fsp4HI | GCNGC | 2 cut(s) | 68, 228 |
| FspBI | CTAG | 3 cut(s) | 110, 329, 379 |
| GluI | GCNGC | 2 cut(s) | 68, 228 |
| GsuI | CTGGAG | 1 cut(s) | 118 |
| HaeIII | GGCC | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 377 |
| HinfI | GANTC | 1 cut(s) | 181 |
| HphI | GGTGA | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 2 cut(s) | 52, 239 |
| Hpy188III | TCNNGA | 1 cut(s) | 13 |
| Hpy8I | GTNNAC | 2 cut(s) | 52, 239 |
| HpyAV | CCTTC | 1 cut(s) | 16 |
| HpyCH4III | ACNGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 3 cut(s) | 70, 230, 335 |
| HpyF3I | CTNAG | 1 cut(s) | 249 |
| Hsp92II | CATG | 1 cut(s) | 377 |
| Kzo9I | GATC | 2 cut(s) | 112, 310 |
| LmnI | GCTCC | 2 cut(s) | 149, 292 |
| LpnPI | CCDG | 4 cut(s) | 148, 228, 304, 366 |
| Lsp1109I | GCAGC | 2 cut(s) | 54, 214 |
| MaeI | CTAG | 3 cut(s) | 110, 329, 379 |
| MaeIII | GTNAC | 2 cut(s) | 56, 319 |
| MalI | GATC | 2 cut(s) | 114, 312 |
| MboI | GATC | 2 cut(s) | 112, 310 |
| MboII | GAAGA | 4 cut(s) | 85, 269, 272, 320 |
| MflI | RGATCY | 1 cut(s) | 112 |
| MhlI | GDGCHC | 1 cut(s) | 289 |
| MluCI | AATT | 1 cut(s) | 303 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MnlI | CCTC | 4 cut(s) | 9, 37, 40, 349 |
| NdeII | GATC | 2 cut(s) | 112, 310 |
| NlaIII | CATG | 1 cut(s) | 377 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| PfeI | GAWTC | 1 cut(s) | 181 |
| PkrI | GCNGC | 2 cut(s) | 69, 229 |
| PstI | CTGCAG | 1 cut(s) | 72 |
| PsuI | RGATCY | 1 cut(s) | 112 |
| SatI | GCNGC | 2 cut(s) | 68, 228 |
| Sau3AI | GATC | 2 cut(s) | 112, 310 |
| SduI | GDGCHC | 1 cut(s) | 289 |
| SfcI | CTRYAG | 1 cut(s) | 68 |
| Sse9I | AATT | 1 cut(s) | 303 |
| SspMI | CTAG | 3 cut(s) | 110, 329, 379 |
| TaaI | ACNGT | 1 cut(s) | 56 |
| TasI | AATT | 1 cut(s) | 303 |
| TfiI | GAWTC | 1 cut(s) | 181 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| TseI | GCWGC | 2 cut(s) | 67, 227 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| XspI | CTAG | 3 cut(s) | 110, 329, 379 |