Rh4AG314000

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0017653
Physical Location & Seq
Forward (+)
62423405 .. 62429079
5675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG314000.1

Sequence Viewer

Length: 1728 bp
ATGAACCCACTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCAGGCCGACCCGGTCACGGCGAAGCAGTCCGGTCACTACCAGCTCGGACTCGACGCGGCGGTTCCGGTTCGAAACGTCAGCTACGGCTCGAAGCCGAGCTACTCCGCTCAGGTCTCGTCGGCGGGGACCGAATCGGACAGAGCCTCGTCCGCCGCGGCGCAACGCGAGGTTGAGGAAGCGTTCTGCGAGCCGAGGGATTCGAAGGTGTTCGGCGTCAGTGGAGGCGTCGCCGGAATTCTGTACAAGTGGGTGAACTACGGCAAGGGGTGGAGGTCGAGGTGGTTTCTGCTGGAAGACGGCGTGCTTTCGTATTACAAGGTTCATGGACCGGACAAGATTCTGATGAGCCCGGCCAGAGAGAAAGGCGTGACGGTGATCGGAGAGGACTCGTTGAGGTATATGAAGAAGGCTAATTGGAATAGAAATCGGCTTGGCTTGCCGGCGAGGAGGCCGTGCAAGCCTTTCGGCGAAGTGCATTTGAAGGTCTCTTCAATTCGTGCCAGCAAATCAGATGATAAAAGGCTTTCCATATTCACAGGAACTAAAACTCTTCACTTGCGTTGTTTATCTAGAGAGGACAGAGCTGCATGGATTGAGGCATTGCTGGCTGCTAAAGATCTTTTCCCCAGAGTGTTGTCAAGCAATGATTTAGTGCCTTCAGAAGATATAGTTGTTTCAACAGAGAAGTTACGATTAAGATTGGCACAGGAGGGAGTTGGTGAGCCTGTTATCAAAGACTGTGAGTCAATTATGCTTTTAGAAGTCTCAGAGCTGCAAAACAAGTTGAAGGCTCTTCAGAGTAAACATGTTATGTTGTTAGACACATTGAGACAATTGGAGACAGAGAAAATAGAGCTGGAAACTACAGTAGTGGACGAAACAAAGGAGCGTGAGTCATACTGCAGTCAGGGCAATAGGAGACATAGTGATTTTTATTCCGTCATGTCAGAGGGCAGTGGAAGTGATTCTGATGCAGAAAATGAAAGTCAAGACGGAGGAGATGTTGAAACAGATGAAGATGAAGGAACATACTTTGATACTTATGATATTTTGTCTTCAGATGCTTTAAGAAGTGCATCCTACCGGAGTAGAGAAGATGCTTTAAGAAGTGCATCCTATCGGAGTAGAGAAGATGCTTTAAGAAGTGCTTCCTATCGGAGTAGGGATGGTTTGGGAAACGGTGGTGGAGATTCTCTCTTTTCTGATCGATTGCATGCAGTTCAGGAGATCATGACAGTTAAATATCCATCTGTGAAAAGGAGGGATAATTTGCCAGAACCAAAGGAGAAAGATAAGCCTATTGGCTTGTGGTCAATTATCAAGGACAATATTGGAAAGGACTTATCTGGAGTTTGTCTTCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGCTTTGAAGATCTGGAGTATTCCTACTTGGTAGATCGAGCATTGGAATGGGGAAAGCAGGGGAACGACTTGATGAGAATTCTCCACGTTGCAGCTTTTGCTGTATCTGGTTATGCATCAACAGAAGGTCGGCAGTGCAAACCCTTCAATCCTCTCCTGGGGGAGACCTATGAGGCTGATTACCCGGATAAAGGACTTCGTTTCTTTTCTGAAAAGGTAGTGCATGCTGACAGTTTTAAATATTGTCTAGTAGCATATCCTTACAAACGGTTATCTGTCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

575

Amino Acids

64.36

Weight (kDa)

5.85

Isoelectric Point (pI)

52.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH PF00169 93 - 219 1.2e-07 PH domain
PH_11 PF15413 94 - 217 1.1e-16 Pleckstrin homology domain
Oxysterol_BP PF01237 451 - 556 7.6e-41 Oxysterol-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017653)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25220 FvH4_4g25220 FvH4_4g25220
rosa_chinensis RchiOBHm_Chr6g0262621 RchiOBHm_Chr7g0222411
rosa_multiflora Rmu_co8309101.1_g000001
rosa_samantha Rh4AG314000 Rh4CG336900 Rh7AG350400 Rh7CG367900 Rh7DG347400
rosa_wichuraiana Rw7G029940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 152
AccII CGCG 3 cut(s) 101, 200, 210
AciI CCGC 7 cut(s) 101, 104, 150, 167, 195, 198, 200
AcoI YGGCCR 1 cut(s) 396
AcsI RAATTY 2 cut(s) 279, 1521
AcuI CTGAAG 3 cut(s) 687, 824, 1086
AcyI GRCGYC 2 cut(s) 258, 270
AfaI GTAC 1 cut(s) 287
AfiI CCNNNNNNNGG 3 cut(s) 61, 1601, 1634
AflIII ACRYGT 1 cut(s) 850
AgsI TTSAA 7 cut(s) 526, 537, 723, 832, 1052, 1451, 1591
AhdI GACNNNNNGTC 1 cut(s) 787
AjnI CCWGG 2 cut(s) 45, 1599
AluBI AGCT 7 cut(s) 88, 126, 144, 629, 817, 901, 1538
AluI AGCT 7 cut(s) 88, 126, 144, 629, 817, 901, 1538
Alw26I GTCTC 7 cut(s) 163, 535, 814, 868, 878, 958, 1601
AoxI GGCC 3 cut(s) 48, 396, 494
ApeKI GCWGC 5 cut(s) 15, 629, 653, 817, 1535
ApoI RAATTY 2 cut(s) 279, 1521
Asp700I GAANNNNTTC 3 cut(s) 251, 1009, 1192
AspLEI GCGC 1 cut(s) 205
AspS9I GGNCC 3 cut(s) 43, 171, 371
AsuC2I CCSGG 3 cut(s) 56, 395, 1628
AsuHPI GGTGA 3 cut(s) 307, 430, 776
AsuII TTCGAA 2 cut(s) 115, 245
AvaII GGWCC 3 cut(s) 43, 171, 371
BanII GRGCYC 1 cut(s) 395
BarI GAAGNNNNNNTAC 2 cut(s) 128, 160
BbsI GAAGAC 3 cut(s) 345, 1092, 1394
BbvI GCAGC 5 cut(s) 2, 616, 640, 804, 1547
BccI CCATC 2 cut(s) 1205, 1300
BceAI ACGGC 5 cut(s) 78, 145, 319, 358, 481
BcgI CGANNNNNNTGC 2 cut(s) 490, 524
BciT130I CCWGG 2 cut(s) 47, 1601
BcnI CCSGG 3 cut(s) 56, 395, 1628
BcoDI GTCTC 7 cut(s) 163, 535, 814, 868, 878, 958, 1601
BfaI CTAG 2 cut(s) 615, 1691
BfmI CTRYAG 2 cut(s) 909, 946
BglII AGATCT 2 cut(s) 661, 1453
BisI GCNGC 8 cut(s) 16, 102, 198, 201, 630, 654, 818, 1536
BlsI GCNGC 8 cut(s) 17, 103, 199, 202, 631, 655, 819, 1537
Bme1390I CCNGG 5 cut(s) 47, 56, 395, 1601, 1628
Bme18I GGWCC 3 cut(s) 43, 171, 371
BmeRI GACNNNNNGTC 1 cut(s) 787
BmgT120I GGNCC 3 cut(s) 43, 171, 371
BmiI GGNNCC 3 cut(s) 44, 108, 172
BmrFI CCNGG 5 cut(s) 47, 56, 395, 1601, 1628
BmsI GCATC 7 cut(s) 1006, 1096, 1130, 1132, 1166, 1168, 1568
BpiI GAAGAC 3 cut(s) 345, 1092, 1394
BplI GAGNNNNNCTC 2 cut(s) 1224, 1256
BpmI CTGGAG 2 cut(s) 1413, 1478
Bpu10I CCTNAGC 1 cut(s) 153
Bpu14I TTCGAA 2 cut(s) 115, 245
BpuMI CCSGG 3 cut(s) 56, 395, 1628
Bsa29I ATCGAT 2 cut(s) 36, 1252
BsaHI GRCGYC 2 cut(s) 258, 270
BsaI GGTCTC 3 cut(s) 163, 535, 1601
BsaJI CCNNGG 3 cut(s) 198, 236, 1600
BsaWI WCCGGW 5 cut(s) 25, 74, 109, 373, 1128
BsaXI ACNNNNNCTCC 6 cut(s) 923, 953, 955, 985, 1032, 1062
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 1601, 1634
Bse118I RCCGGY 1 cut(s) 484
Bse3DI GCAATG 4 cut(s) 18, 644, 694, 1433
BseBI CCWGG 2 cut(s) 47, 1601
BseCI ATCGAT 2 cut(s) 36, 1252
BseDI CCNNGG 3 cut(s) 198, 236, 1600
BseGI GGATG 3 cut(s) 1121, 1157, 1216
BseLI CCNNNNNNNGG 3 cut(s) 61, 1601, 1634
BseMI GCAATG 4 cut(s) 18, 644, 694, 1433
BseMII CTCAG 2 cut(s) 167, 825
BseRI GAGGAG 2 cut(s) 505, 1056
BseXI GCAGC 5 cut(s) 2, 616, 640, 804, 1547
Bsh1236I CGCG 3 cut(s) 101, 200, 210
Bsh1285I CGRYCG 2 cut(s) 36, 40
BshFI GGCC 3 cut(s) 50, 398, 496
BshVI ATCGAT 2 cut(s) 36, 1252
BsiEI CGRYCG 2 cut(s) 36, 40
BslFI GGGAC 2 cut(s) 56, 184
BslI CCNNNNNNNGG 3 cut(s) 61, 1601, 1634
BsmAI GTCTC 7 cut(s) 163, 535, 814, 868, 878, 958, 1601
BsmFI GGGAC 2 cut(s) 56, 184
BsnI GGCC 3 cut(s) 50, 398, 496
Bso31I GGTCTC 3 cut(s) 163, 535, 1601
Bsp119I TTCGAA 2 cut(s) 115, 245
Bsp1286I GDGCHC 1 cut(s) 395
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
BspACI CCGC 7 cut(s) 101, 104, 150, 167, 195, 198, 200
BspANI GGCC 3 cut(s) 50, 398, 496
BspCNI CTCAG 2 cut(s) 166, 824
BspDI ATCGAT 2 cut(s) 36, 1252
BspFNI CGCG 3 cut(s) 101, 200, 210
BspHI TCATGA 1 cut(s) 1275
BspLI GGNNCC 3 cut(s) 44, 108, 172
BspMAI CTGCAG 1 cut(s) 950
BspQI GCTCTTC 1 cut(s) 843
BspT104I TTCGAA 2 cut(s) 115, 245
BspTNI GGTCTC 3 cut(s) 163, 535, 1601
BsrBI CCGCTC 1 cut(s) 152
BsrDI GCAATG 4 cut(s) 18, 644, 694, 1433
BsrFI RCCGGY 1 cut(s) 484
BsrGI TGTACA 1 cut(s) 285
BssAI RCCGGY 1 cut(s) 484
BssECI CCNNGG 3 cut(s) 198, 236, 1600
BssMI GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
BssNI GRCGYC 2 cut(s) 258, 270
Bst2UI CCWGG 2 cut(s) 47, 1601
Bst4CI ACNGT 8 cut(s) 12, 418, 785, 913, 1226, 1282, 1676, 1713
Bst6I CTCTTC 4 cut(s) 538, 600, 843, 1435
BstACI GRCGYC 2 cut(s) 258, 270
BstAPI GCANNNNNTGC 1 cut(s) 1541
BstAUI TGTACA 1 cut(s) 285
BstBI TTCGAA 2 cut(s) 115, 245
BstC8I GCNNGC 9 cut(s) 233, 347, 482, 486, 503, 547, 651, 1260, 1668
BstDEI CTNAG 2 cut(s) 153, 811
BstDSI CCRYGG 1 cut(s) 198
BstF5I GGATG 3 cut(s) 1121, 1157, 1216
BstFNI CGCG 3 cut(s) 101, 200, 210
BstHHI GCGC 1 cut(s) 205
BstKTI GATC 8 cut(s) 36, 40, 423, 664, 1252, 1275, 1456, 1480
BstMAI GTCTC 7 cut(s) 163, 535, 814, 868, 878, 958, 1601
BstMBI GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
BstMCI CGRYCG 2 cut(s) 36, 40
BstMWI GCNNNNNNNGC 6 cut(s) 194, 481, 502, 650, 954, 1541
BstNI CCWGG 2 cut(s) 47, 1601
BstNSI RCATGY 3 cut(s) 854, 1262, 1670
BstSCI CCNGG 5 cut(s) 45, 54, 393, 1599, 1626
BstSFI CTRYAG 2 cut(s) 909, 946
BstUI CGCG 3 cut(s) 101, 200, 210
BstV1I GCAGC 5 cut(s) 2, 616, 640, 804, 1547
BstV2I GAAGAC 3 cut(s) 345, 1092, 1394
BstX2I RGATCY 2 cut(s) 661, 1453
BstYI RGATCY 2 cut(s) 661, 1453
Bsu15I ATCGAT 2 cut(s) 36, 1252
BsuRI GGCC 3 cut(s) 50, 398, 496
BsuTUI ATCGAT 2 cut(s) 36, 1252
BtgI CCRYGG 1 cut(s) 198
BtsCI GGATG 3 cut(s) 1121, 1157, 1216
BtsI GCAGTG 2 cut(s) 1006, 1583
BtsIMutI CAGTG 4 cut(s) 8, 268, 1006, 1583
Cac8I GCNNGC 9 cut(s) 233, 347, 482, 486, 503, 547, 651, 1260, 1668
CciI TCATGA 1 cut(s) 1275
CfoI GCGC 1 cut(s) 205
Cfr10I RCCGGY 1 cut(s) 484
Cfr13I GGNCC 3 cut(s) 43, 171, 371
Cfr42I CCGCGG 1 cut(s) 201
ClaI ATCGAT 2 cut(s) 36, 1252
CseI GACGC 3 cut(s) 107, 247, 259
Csp6I GTAC 1 cut(s) 286
CviAII CATG 7 cut(s) 368, 633, 851, 988, 1259, 1276, 1667
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 2 cut(s) 153, 811
DpnI GATC 8 cut(s) 35, 39, 422, 663, 1251, 1274, 1455, 1479
DpnII GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
DraI TTTAAA 1 cut(s) 1681
DriI GACNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 396
Eam1104I CTCTTC 4 cut(s) 538, 600, 843, 1435
Eam1105I GACNNNNNGTC 1 cut(s) 787
EarI CTCTTC 4 cut(s) 538, 600, 843, 1435
EciI GGCGGA 1 cut(s) 184
Eco24I GRGCYC 1 cut(s) 395
Eco31I GGTCTC 3 cut(s) 163, 535, 1601
Eco47I GGWCC 3 cut(s) 43, 171, 371
Eco57I CTGAAG 3 cut(s) 687, 824, 1086
EcoRI GAATTC 2 cut(s) 279, 1521
EcoRII CCWGG 2 cut(s) 45, 1599
EcoT22I ATGCAT 1 cut(s) 1561
EcoT38I GRGCYC 1 cut(s) 395
FaeI CATG 7 cut(s) 371, 636, 854, 991, 1262, 1279, 1670
FalI AAGNNNNNCTT 2 cut(s) 1177, 1209
FaqI GGGAC 2 cut(s) 56, 184
FatI CATG 7 cut(s) 367, 632, 850, 987, 1258, 1275, 1666
FauI CCCGC 1 cut(s) 160
Fnu4HI GCNGC 8 cut(s) 16, 102, 198, 201, 630, 654, 818, 1536
FokI GGATG 3 cut(s) 1108, 1144, 1223
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 8 cut(s) 16, 102, 198, 201, 630, 654, 818, 1536
FspBI CTAG 2 cut(s) 615, 1691
GlaI GCGC 1 cut(s) 204
GluI GCNGC 8 cut(s) 16, 102, 198, 201, 630, 654, 818, 1536
GsuI CTGGAG 2 cut(s) 1413, 1478
HaeIII GGCC 3 cut(s) 50, 398, 496
HgaI GACGC 3 cut(s) 107, 247, 259
HhaI GCGC 1 cut(s) 205
Hin1I GRCGYC 2 cut(s) 258, 270
Hin1II CATG 7 cut(s) 371, 636, 854, 991, 1262, 1279, 1670
Hin6I GCGC 1 cut(s) 203
HinP1I GCGC 1 cut(s) 203
HinfI GANTC 9 cut(s) 93, 176, 242, 382, 431, 788, 938, 1010, 1235
HphI GGTGA 3 cut(s) 307, 430, 776
Hpy166II GTNNAC 3 cut(s) 298, 848, 919
Hpy188III TCNNGA 7 cut(s) 41, 615, 1034, 1268, 1276, 1392, 1457
Hpy8I GTNNAC 3 cut(s) 298, 848, 919
Hpy99I CGWCG 3 cut(s) 101, 166, 275
HpyAV CCTTC 8 cut(s) 241, 445, 520, 711, 826, 1061, 1562, 1597
HpyCH4III ACNGT 8 cut(s) 12, 418, 785, 913, 1226, 1282, 1676, 1713
HpyCH4IV ACGT 2 cut(s) 120, 1530
HpyF10VI GCNNNNNNNGC 6 cut(s) 194, 481, 502, 650, 954, 1541
HpyF3I CTNAG 2 cut(s) 153, 811
HpySE526I ACGT 2 cut(s) 120, 1530
Hsp92I GRCGYC 2 cut(s) 258, 270
Hsp92II CATG 7 cut(s) 371, 636, 854, 991, 1262, 1279, 1670
HspAI GCGC 1 cut(s) 203
KroI GCCGGC 1 cut(s) 484
KroNI GCCGGC 1 cut(s) 486
KspI CCGCGG 1 cut(s) 201
Kzo9I GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
LguI GCTCTTC 1 cut(s) 843
LmnI GCTCC 2 cut(s) 28, 931
Lsp1109I GCAGC 5 cut(s) 2, 616, 640, 804, 1547
LweI GCATC 7 cut(s) 1006, 1096, 1130, 1132, 1166, 1168, 1568
MaeI CTAG 2 cut(s) 615, 1691
MaeII ACGT 2 cut(s) 120, 1530
MaeIII GTNAC 4 cut(s) 58, 77, 412, 732
MalI GATC 8 cut(s) 35, 39, 422, 663, 1251, 1274, 1455, 1479
MbiI CCGCTC 1 cut(s) 152
MboI GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 2 cut(s) 661, 1453
MhlI GDGCHC 1 cut(s) 395
MluCI AATT 8 cut(s) 279, 457, 537, 792, 878, 1312, 1359, 1521
MlyI GAGTC 4 cut(s) 87, 425, 797, 947
Mph1103I ATGCAT 1 cut(s) 1561
MroNI GCCGGC 1 cut(s) 484
MroXI GAANNNNTTC 3 cut(s) 251, 1009, 1192
MseI TTAA 8 cut(s) 740, 1112, 1148, 1184, 1284, 1416, 1680, 1726
MslI CAYNNNNRTG 1 cut(s) 1489
MspA1I CMGCKG 1 cut(s) 200
MspR9I CCNGG 5 cut(s) 47, 56, 395, 1601, 1628
MunI CAATTG 1 cut(s) 878
MvaI CCWGG 2 cut(s) 47, 1601
MvnI CGCG 3 cut(s) 101, 200, 210
MwoI GCNNNNNNNGC 6 cut(s) 194, 481, 502, 650, 954, 1541
NaeI GCCGGC 1 cut(s) 486
NciI CCSGG 3 cut(s) 56, 395, 1628
NdeII GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
NgoMIV GCCGGC 1 cut(s) 484
NlaIII CATG 7 cut(s) 371, 636, 854, 991, 1262, 1279, 1670
NlaIV GGNNCC 3 cut(s) 44, 108, 172
NmeAIII GCCGAG 2 cut(s) 165, 261
NmuCI GTSAC 3 cut(s) 58, 77, 412
NsiI ATGCAT 1 cut(s) 1561
NspI RCATGY 3 cut(s) 854, 1262, 1670
NspV TTCGAA 2 cut(s) 115, 245
PaeI GCATGC 2 cut(s) 1262, 1670
PagI TCATGA 1 cut(s) 1275
PciI ACATGT 1 cut(s) 850
PciSI GCTCTTC 1 cut(s) 843
PdiI GCCGGC 1 cut(s) 486
PdmI GAANNNNTTC 3 cut(s) 251, 1009, 1192
PfeI GAWTC 5 cut(s) 176, 242, 382, 1010, 1235
PflFI GACNNNGTC 1 cut(s) 56
PkrI GCNGC 8 cut(s) 17, 103, 199, 202, 631, 655, 819, 1537
Ple19I CGATCG 2 cut(s) 36, 40
PleI GAGTC 4 cut(s) 87, 425, 796, 946
PpsI GAGTC 4 cut(s) 87, 425, 796, 946
PscI ACATGT 1 cut(s) 850
Psp6I CCWGG 2 cut(s) 45, 1599
PspGI CCWGG 2 cut(s) 45, 1599
PspN4I GGNNCC 3 cut(s) 44, 108, 172
PspPI GGNCC 3 cut(s) 43, 171, 371
PstI CTGCAG 1 cut(s) 950
PsuI RGATCY 2 cut(s) 661, 1453
PsyI GACNNNGTC 1 cut(s) 56
PvuI CGATCG 2 cut(s) 36, 40
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 1489
SacII CCGCGG 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 843
SaqAI TTAA 8 cut(s) 740, 1112, 1148, 1184, 1284, 1416, 1680, 1726
SatI GCNGC 8 cut(s) 16, 102, 198, 201, 630, 654, 818, 1536
Sau3AI GATC 8 cut(s) 33, 37, 420, 661, 1249, 1272, 1453, 1477
Sau96I GGNCC 3 cut(s) 43, 171, 371
SchI GAGTC 4 cut(s) 87, 425, 797, 947
ScrFI CCNGG 5 cut(s) 47, 56, 395, 1601, 1628
SduI GDGCHC 1 cut(s) 395
SfaNI GCATC 7 cut(s) 1006, 1096, 1130, 1132, 1166, 1168, 1568
SfcI CTRYAG 2 cut(s) 909, 946
Sfr303I CCGCGG 1 cut(s) 201
SfuI TTCGAA 2 cut(s) 115, 245
SgrBI CCGCGG 1 cut(s) 201
SinI GGWCC 3 cut(s) 43, 171, 371
SmiMI CAYNNNNRTG 1 cut(s) 1489
SphI GCATGC 2 cut(s) 1262, 1670
Sse9I AATT 8 cut(s) 279, 457, 537, 792, 878, 1312, 1359, 1521
SsiI CCGC 7 cut(s) 101, 104, 150, 167, 195, 198, 200
SspI AATATT 2 cut(s) 1375, 1685
SspMI CTAG 2 cut(s) 615, 1691
StyD4I CCNGG 5 cut(s) 45, 54, 393, 1599, 1626
TaaI ACNGT 8 cut(s) 12, 418, 785, 913, 1226, 1282, 1676, 1713
TaiI ACGT 2 cut(s) 123, 1533
TaqI TCGA 9 cut(s) 32, 36, 96, 115, 134, 245, 320, 1252, 1480
TaqII GACCGA 1 cut(s) 188
TasI AATT 8 cut(s) 279, 457, 537, 792, 878, 1312, 1359, 1521
TatI WGTACW 1 cut(s) 285
TauI GCSGC 3 cut(s) 104, 200, 203
TfiI GAWTC 5 cut(s) 176, 242, 382, 1010, 1235
Tru1I TTAA 8 cut(s) 740, 1112, 1148, 1184, 1284, 1416, 1680, 1726
Tru9I TTAA 8 cut(s) 740, 1112, 1148, 1184, 1284, 1416, 1680, 1726
TscAI CASTG 4 cut(s) 15, 268, 1006, 1583
TseFI GTSAC 3 cut(s) 58, 77, 412
TseI GCWGC 5 cut(s) 15, 629, 653, 817, 1535
Tsp45I GTSAC 3 cut(s) 58, 77, 412
TspDTI ATGAA 8 cut(s) 17, 356, 461, 1041, 1074, 1080, 1422, 1434
TspGWI ACGGA 2 cut(s) 973, 1053
TspRI CASTG 4 cut(s) 15, 268, 1006, 1583
Tth111I GACNNNGTC 1 cut(s) 56
VpaK11BI GGWCC 3 cut(s) 43, 171, 371
XapI RAATTY 2 cut(s) 279, 1521
XbaI TCTAGA 1 cut(s) 614
XceI RCATGY 3 cut(s) 854, 1262, 1670
XmnI GAANNNNTTC 3 cut(s) 251, 1009, 1192
XspI CTAG 2 cut(s) 615, 1691
Zsp2I ATGCAT 1 cut(s) 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.