Rh7AG350400

Oxysterol-binding protein-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
44651009 .. 44652031
1023 bp
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UTR
Exon/CDS
Intron
Rh7AG350400.1

Sequence Viewer

Length: 558 bp
ATGCAGAAAATAGAGGACAGAGCTGCATGGATTGAGGCATTGCTGGCTGCTAAAGATCTTTTCCCCAGAGTTTTGTCAAGCAATGATTTAGTGCCTTCAGAAGATATAGTTGTTTCAACAGAGAAGTTACGATTAAGATTGGCACAGGAGGGAGTTGGTGAGCCAGTTATCAAAGACTGCGAGTCAATTATGCTTTTAGAAGTCTCAGAGCTGCAAAACCAGTTGAAGGCTCTTCAGAGTAAACATGTTATGTTGTTAGACACATTGAGACAATTGGAGATAGAGAAAATAGAGCTGGAAACTATAGTAGTGGACGAAACAAAGGAACGTGAGTCATACTGCAGTCAGGGCAATAGGAGACATAGTGATTTTTATTCCGTCATGTCAGAGGGCAGTGGAAGTGATTCTAATGCAGAAAATGAAAGTCAAGATGGAGGAGATGTTGAAACAGATGAAGATGAAGGAACATACTTTGATACTTATGATATTTTGTCTTCAGATGCTTTAAGAAGTGCATCCTACCGGAGTAGAGAAGGTTTGCGGTTTAGCACACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

185

Amino Acids

20.87

Weight (kDa)

4.41

Isoelectric Point (pI)

62.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017653)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 541
AcuI CTGAAG 3 cut(s) 81, 218, 480
AfiI CCNNNNNNNGG 1 cut(s) 226
AflIII ACRYGT 1 cut(s) 244
AgsI TTSAA 3 cut(s) 117, 226, 446
AhdI GACNNNNNGTC 1 cut(s) 181
AluBI AGCT 3 cut(s) 23, 211, 295
AluI AGCT 3 cut(s) 23, 211, 295
Alw26I GTCTC 3 cut(s) 208, 262, 352
ApeKI GCWGC 3 cut(s) 23, 47, 211
Asp700I GAANNNNTTC 1 cut(s) 403
AsuHPI GGTGA 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 486
BbvI GCAGC 3 cut(s) 10, 34, 198
BccI CCATC 1 cut(s) 425
BcoDI GTCTC 3 cut(s) 208, 262, 352
BfmI CTRYAG 2 cut(s) 303, 340
BglII AGATCT 1 cut(s) 55
BisI GCNGC 3 cut(s) 24, 48, 212
BlsI GCNGC 3 cut(s) 25, 49, 213
BmeRI GACNNNNNGTC 1 cut(s) 181
BmsI GCATC 2 cut(s) 490, 524
BpiI GAAGAC 1 cut(s) 486
BsaWI WCCGGW 1 cut(s) 522
BsaXI ACNNNNNCTCC 4 cut(s) 349, 379, 426, 456
Bsc4I CCNNNNNNNGG 1 cut(s) 226
Bse1I ACTGG 2 cut(s) 164, 220
Bse3DI GCAATG 2 cut(s) 38, 88
BseGI GGATG 1 cut(s) 515
BseLI CCNNNNNNNGG 1 cut(s) 226
BseMI GCAATG 2 cut(s) 38, 88
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 2 cut(s) 164, 220
BseRI GAGGAG 1 cut(s) 450
BseXI GCAGC 3 cut(s) 10, 34, 198
BsiSI CCGG 1 cut(s) 523
BslI CCNNNNNNNGG 1 cut(s) 226
BsmAI GTCTC 3 cut(s) 208, 262, 352
Bsp143I GATC 1 cut(s) 55
BspACI CCGC 1 cut(s) 541
BspCNI CTCAG 1 cut(s) 218
BspMAI CTGCAG 1 cut(s) 344
BspQI GCTCTTC 1 cut(s) 237
BsrDI GCAATG 2 cut(s) 38, 88
BsrI ACTGG 2 cut(s) 164, 220
BssMI GATC 1 cut(s) 55
Bst6I CTCTTC 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 205
BstF5I GGATG 1 cut(s) 515
BstKTI GATC 1 cut(s) 58
BstMAI GTCTC 3 cut(s) 208, 262, 352
BstMBI GATC 1 cut(s) 55
BstMWI GCNNNNNNNGC 2 cut(s) 44, 348
BstNSI RCATGY 1 cut(s) 248
BstSFI CTRYAG 2 cut(s) 303, 340
BstV1I GCAGC 3 cut(s) 10, 34, 198
BstV2I GAAGAC 1 cut(s) 486
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
BtsCI GGATG 1 cut(s) 515
BtsI GCAGTG 1 cut(s) 400
BtsIMutI CAGTG 1 cut(s) 400
Cac8I GCNNGC 1 cut(s) 45
CviAII CATG 3 cut(s) 27, 245, 382
CviJI RGCY 6 cut(s) 23, 47, 163, 211, 230, 295
CviKI_1 RGCY 6 cut(s) 23, 47, 163, 211, 230, 295
DdeI CTNAG 1 cut(s) 205
DpnI GATC 1 cut(s) 57
DpnII GATC 1 cut(s) 55
DriI GACNNNNNGTC 1 cut(s) 181
Eam1104I CTCTTC 1 cut(s) 237
Eam1105I GACNNNNNGTC 1 cut(s) 181
EarI CTCTTC 1 cut(s) 237
Eco57I CTGAAG 3 cut(s) 81, 218, 480
FaeI CATG 3 cut(s) 30, 248, 385
FatI CATG 3 cut(s) 26, 244, 381
Fnu4HI GCNGC 3 cut(s) 24, 48, 212
FokI GGATG 1 cut(s) 502
Fsp4HI GCNGC 3 cut(s) 24, 48, 212
GluI GCNGC 3 cut(s) 24, 48, 212
HapII CCGG 1 cut(s) 523
Hin1II CATG 3 cut(s) 30, 248, 385
HinfI GANTC 3 cut(s) 182, 332, 404
HpaII CCGG 1 cut(s) 523
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 2 cut(s) 242, 313
Hpy188I TCNGA 5 cut(s) 100, 208, 237, 388, 499
Hpy188III TCNNGA 1 cut(s) 428
Hpy8I GTNNAC 2 cut(s) 242, 313
HpyAV CCTTC 4 cut(s) 105, 220, 455, 527
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 6 cut(s) 4, 26, 214, 342, 413, 515
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 348
HpyF3I CTNAG 1 cut(s) 205
HpySE526I ACGT 1 cut(s) 328
Hsp92II CATG 3 cut(s) 30, 248, 385
Kzo9I GATC 1 cut(s) 55
LguI GCTCTTC 1 cut(s) 237
LpnPI CCDG 8 cut(s) 29, 79, 131, 177, 233, 281, 332, 536
Lsp1109I GCAGC 3 cut(s) 10, 34, 198
LweI GCATC 2 cut(s) 490, 524
MaeII ACGT 1 cut(s) 328
MaeIII GTNAC 1 cut(s) 126
MalI GATC 1 cut(s) 57
MboI GATC 1 cut(s) 55
MboII GAAGA 4 cut(s) 113, 224, 467, 486
MfeI CAATTG 1 cut(s) 272
MflI RGATCY 1 cut(s) 55
MluCI AATT 2 cut(s) 186, 272
MlyI GAGTC 2 cut(s) 191, 341
MnlI CCTC 5 cut(s) 7, 28, 142, 382, 428
MroXI GAANNNNTTC 1 cut(s) 403
MseI TTAA 2 cut(s) 134, 506
MspI CCGG 1 cut(s) 523
MunI CAATTG 1 cut(s) 272
MwoI GCNNNNNNNGC 2 cut(s) 44, 348
NdeII GATC 1 cut(s) 55
NlaIII CATG 3 cut(s) 30, 248, 385
NspI RCATGY 1 cut(s) 248
PciI ACATGT 1 cut(s) 244
PciSI GCTCTTC 1 cut(s) 237
PdmI GAANNNNTTC 1 cut(s) 403
PfeI GAWTC 1 cut(s) 404
PkrI GCNGC 3 cut(s) 25, 49, 213
PleI GAGTC 2 cut(s) 190, 340
PpsI GAGTC 2 cut(s) 190, 340
PscI ACATGT 1 cut(s) 244
PstI CTGCAG 1 cut(s) 344
PsuI RGATCY 1 cut(s) 55
SapI GCTCTTC 1 cut(s) 237
SaqAI TTAA 2 cut(s) 134, 506
SatI GCNGC 3 cut(s) 24, 48, 212
Sau3AI GATC 1 cut(s) 55
SchI GAGTC 2 cut(s) 191, 341
SetI ASST 5 cut(s) 25, 213, 297, 331, 538
SfaNI GCATC 2 cut(s) 490, 524
SfcI CTRYAG 2 cut(s) 303, 340
Sse9I AATT 2 cut(s) 186, 272
SsiI CCGC 1 cut(s) 541
TaiI ACGT 1 cut(s) 331
TasI AATT 2 cut(s) 186, 272
TfiI GAWTC 1 cut(s) 404
Tru1I TTAA 2 cut(s) 134, 506
Tru9I TTAA 2 cut(s) 134, 506
TscAI CASTG 1 cut(s) 400
TseI GCWGC 3 cut(s) 23, 47, 211
TspDTI ATGAA 3 cut(s) 435, 468, 474
TspGWI ACGGA 1 cut(s) 367
TspRI CASTG 1 cut(s) 400
XceI RCATGY 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.