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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004716.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00107110 |
| rosa_samantha | Rh4AG015000 Rh4BG008600 Rh5BG458100 Rh5BG483100 Rh5CG479900 |
| rosa_wichuraiana | Rw3G027880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 176 |
| AclWI | GGATC | 1 cut(s) | 118 |
| AcsI | RAATTY | 1 cut(s) | 379 |
| AcuI | CTGAAG | 1 cut(s) | 224 |
| AgsI | TTSAA | 2 cut(s) | 232, 337 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AluBI | AGCT | 2 cut(s) | 238, 340 |
| AluI | AGCT | 2 cut(s) | 238, 340 |
| AlwI | GGATC | 1 cut(s) | 118 |
| ApeKI | GCWGC | 3 cut(s) | 170, 173, 385 |
| ApoI | RAATTY | 1 cut(s) | 379 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 254, 286 |
| AspS9I | GGNCC | 1 cut(s) | 316 |
| AsuNHI | GCTAGC | 1 cut(s) | 364 |
| AvaII | GGWCC | 1 cut(s) | 316 |
| BbvI | GCAGC | 3 cut(s) | 182, 185, 372 |
| BccI | CCATC | 2 cut(s) | 142, 146 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 187, 221 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BfaI | CTAG | 1 cut(s) | 365 |
| BisI | GCNGC | 4 cut(s) | 171, 174, 177, 386 |
| BlsI | GCNGC | 4 cut(s) | 172, 175, 178, 387 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| Bme18I | GGWCC | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 1 cut(s) | 316 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BmtI | GCTAGC | 1 cut(s) | 368 |
| BpuEI | CTTGAG | 1 cut(s) | 105 |
| BsaJI | CCNNGG | 4 cut(s) | 81, 102, 103, 219 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 4 cut(s) | 81, 102, 103, 219 |
| BseGI | GGATG | 2 cut(s) | 74, 157 |
| BseXI | GCAGC | 3 cut(s) | 182, 185, 372 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| BsgI | GTGCAG | 1 cut(s) | 284 |
| BslFI | GGGAC | 2 cut(s) | 242, 382 |
| BsmFI | GGGAC | 2 cut(s) | 242, 382 |
| Bsp143I | GATC | 1 cut(s) | 110 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspOI | GCTAGC | 1 cut(s) | 368 |
| BspPI | GGATC | 1 cut(s) | 118 |
| BssECI | CCNNGG | 4 cut(s) | 81, 102, 103, 219 |
| BssMI | GATC | 1 cut(s) | 110 |
| BssT1I | CCWWGG | 2 cut(s) | 81, 219 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| Bst4CI | ACNGT | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 1 cut(s) | 366 |
| BstF5I | GGATG | 2 cut(s) | 74, 157 |
| BstKTI | GATC | 1 cut(s) | 113 |
| BstMBI | GATC | 1 cut(s) | 110 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 176 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 3 cut(s) | 182, 185, 372 |
| BstX2I | RGATCY | 1 cut(s) | 110 |
| BstYI | RGATCY | 1 cut(s) | 110 |
| BtsCI | GGATG | 2 cut(s) | 74, 157 |
| Cac8I | GCNNGC | 1 cut(s) | 366 |
| Cfr13I | GGNCC | 1 cut(s) | 316 |
| CviJI | RGCY | 6 cut(s) | 86, 131, 160, 238, 340, 364 |
| CviKI_1 | RGCY | 6 cut(s) | 86, 131, 160, 238, 340, 364 |
| DpnI | GATC | 1 cut(s) | 112 |
| DpnII | GATC | 1 cut(s) | 110 |
| Eco130I | CCWWGG | 2 cut(s) | 81, 219 |
| Eco47I | GGWCC | 1 cut(s) | 316 |
| Eco57I | CTGAAG | 1 cut(s) | 224 |
| EcoO109I | RGGNCCY | 1 cut(s) | 316 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 2 cut(s) | 81, 219 |
| ErhI | CCWWGG | 2 cut(s) | 81, 219 |
| FaqI | GGGAC | 2 cut(s) | 242, 382 |
| Fnu4HI | GCNGC | 4 cut(s) | 171, 174, 177, 386 |
| FokI | GGATG | 2 cut(s) | 81, 164 |
| Fsp4HI | GCNGC | 4 cut(s) | 171, 174, 177, 386 |
| FspBI | CTAG | 1 cut(s) | 365 |
| GluI | GCNGC | 4 cut(s) | 171, 174, 177, 386 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| HindIII | AAGCTT | 2 cut(s) | 236, 338 |
| HinfI | GANTC | 1 cut(s) | 408 |
| Hpy166II | GTNNAC | 2 cut(s) | 273, 349 |
| Hpy188I | TCNGA | 3 cut(s) | 48, 243, 378 |
| Hpy8I | GTNNAC | 2 cut(s) | 273, 349 |
| HpyAV | CCTTC | 1 cut(s) | 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 305 |
| HpyCH4V | TGCA | 5 cut(s) | 33, 208, 301, 312, 425 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 176 |
| Kzo9I | GATC | 1 cut(s) | 110 |
| LpnPI | CCDG | 6 cut(s) | 89, 116, 117, 279, 289, 346 |
| Lsp1109I | GCAGC | 3 cut(s) | 182, 185, 372 |
| MaeI | CTAG | 1 cut(s) | 365 |
| MaeIII | GTNAC | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 112 |
| MboI | GATC | 1 cut(s) | 110 |
| MboII | GAAGA | 2 cut(s) | 244, 291 |
| MflI | RGATCY | 1 cut(s) | 110 |
| MluCI | AATT | 3 cut(s) | 28, 227, 379 |
| MlyI | GAGTC | 1 cut(s) | 417 |
| MmeI | TCCRAC | 1 cut(s) | 98 |
| MnlI | CCTC | 1 cut(s) | 226 |
| MseI | TTAA | 1 cut(s) | 393 |
| MslI | CAYNNNNRTG | 1 cut(s) | 420 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 176 |
| NdeII | GATC | 1 cut(s) | 110 |
| NheI | GCTAGC | 1 cut(s) | 364 |
| NmuCI | GTSAC | 1 cut(s) | 211 |
| PasI | CCCWGGG | 1 cut(s) | 103 |
| PkrI | GCNGC | 4 cut(s) | 172, 175, 178, 387 |
| PleI | GAGTC | 1 cut(s) | 416 |
| PpsI | GAGTC | 1 cut(s) | 416 |
| PpuMI | RGGWCCY | 1 cut(s) | 316 |
| Psp5II | RGGWCCY | 1 cut(s) | 316 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PspPI | GGNCC | 1 cut(s) | 316 |
| PspPPI | RGGWCCY | 1 cut(s) | 316 |
| PsuI | RGATCY | 1 cut(s) | 110 |
| RseI | CAYNNNNRTG | 1 cut(s) | 420 |
| SaqAI | TTAA | 1 cut(s) | 393 |
| SatI | GCNGC | 4 cut(s) | 171, 174, 177, 386 |
| Sau3AI | GATC | 1 cut(s) | 110 |
| Sau96I | GGNCC | 1 cut(s) | 316 |
| SchI | GAGTC | 1 cut(s) | 417 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SetI | ASST | 8 cut(s) | 55, 218, 240, 268, 294, 318, 333, 342 |
| SinI | GGWCC | 1 cut(s) | 316 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 420 |
| SmlI | CTYRAG | 1 cut(s) | 120 |
| SmoI | CTYRAG | 1 cut(s) | 120 |
| Sse9I | AATT | 3 cut(s) | 28, 227, 379 |
| SsiI | CCGC | 1 cut(s) | 176 |
| SspMI | CTAG | 1 cut(s) | 365 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| StyI | CCWWGG | 2 cut(s) | 81, 219 |
| TaaI | ACNGT | 1 cut(s) | 305 |
| TasI | AATT | 3 cut(s) | 28, 227, 379 |
| TauI | GCSGC | 1 cut(s) | 179 |
| Tru1I | TTAA | 1 cut(s) | 393 |
| Tru9I | TTAA | 1 cut(s) | 393 |
| TseFI | GTSAC | 1 cut(s) | 211 |
| TseI | GCWGC | 3 cut(s) | 170, 173, 385 |
| Tsp45I | GTSAC | 1 cut(s) | 211 |
| TspDTI | ATGAA | 1 cut(s) | 261 |
| VpaK11BI | GGWCC | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 379 |
| XspI | CTAG | 1 cut(s) | 365 |