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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004716.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00107110 |
| rosa_samantha | Rh4AG015000 Rh4BG008600 Rh5BG458100 Rh5BG483100 Rh5CG479900 |
| rosa_wichuraiana | Rw3G027880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 217 |
| AccI | GTMKAC | 1 cut(s) | 5 |
| AciI | CCGC | 1 cut(s) | 119 |
| AclWI | GGATC | 1 cut(s) | 62 |
| AcuI | CTGAAG | 1 cut(s) | 167 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 51, 225 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 18, 181 |
| AluI | AGCT | 2 cut(s) | 18, 181 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| AlwI | GGATC | 1 cut(s) | 62 |
| AoxI | GGCC | 1 cut(s) | 288 |
| ApeKI | GCWGC | 2 cut(s) | 113, 116 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| AsuHPI | GGTGA | 2 cut(s) | 34, 37 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BbvI | GCAGC | 2 cut(s) | 125, 128 |
| BccI | CCATC | 3 cut(s) | 85, 89, 280 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 130, 164 |
| BfuAI | ACCTGC | 1 cut(s) | 217 |
| BisI | GCNGC | 3 cut(s) | 114, 117, 120 |
| BlsI | GCNGC | 3 cut(s) | 115, 118, 121 |
| BpmI | CTGGAG | 1 cut(s) | 256 |
| BpuEI | CTTGAG | 1 cut(s) | 49 |
| BsaJI | CCNNGG | 1 cut(s) | 162 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 51, 225 |
| BseDI | CCNNGG | 1 cut(s) | 162 |
| BseGI | GGATG | 2 cut(s) | 100, 291 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 51, 225 |
| BseXI | GCAGC | 2 cut(s) | 125, 128 |
| BseYI | CCCAGC | 1 cut(s) | 75 |
| BsgI | GTGCAG | 1 cut(s) | 228 |
| BshFI | GGCC | 1 cut(s) | 290 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| BslFI | GGGAC | 2 cut(s) | 185, 320 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 51, 225 |
| BsmFI | GGGAC | 2 cut(s) | 185, 320 |
| BsnI | GGCC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 42 |
| Bsp143I | GATC | 1 cut(s) | 54 |
| BspACI | CCGC | 1 cut(s) | 119 |
| BspANI | GGCC | 1 cut(s) | 290 |
| BspMI | ACCTGC | 1 cut(s) | 217 |
| BspPI | GGATC | 1 cut(s) | 62 |
| BssECI | CCNNGG | 1 cut(s) | 162 |
| BssMI | GATC | 1 cut(s) | 54 |
| BssT1I | CCWWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 249 |
| BstC8I | GCNNGC | 1 cut(s) | 20 |
| BstF5I | GGATG | 2 cut(s) | 100, 291 |
| BstKTI | GATC | 1 cut(s) | 57 |
| BstMBI | GATC | 1 cut(s) | 54 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 119 |
| BstV1I | GCAGC | 2 cut(s) | 125, 128 |
| BstX2I | RGATCY | 1 cut(s) | 54 |
| BstYI | RGATCY | 1 cut(s) | 54 |
| BsuRI | GGCC | 1 cut(s) | 290 |
| BtsCI | GGATG | 2 cut(s) | 100, 291 |
| BveI | ACCTGC | 1 cut(s) | 217 |
| Cac8I | GCNNGC | 1 cut(s) | 20 |
| CseI | GACGC | 1 cut(s) | 201 |
| CviJI | RGCY | 5 cut(s) | 18, 75, 103, 181, 290 |
| CviKI_1 | RGCY | 5 cut(s) | 18, 75, 103, 181, 290 |
| DpnI | GATC | 1 cut(s) | 56 |
| DpnII | GATC | 1 cut(s) | 54 |
| Eco130I | CCWWGG | 1 cut(s) | 162 |
| Eco57I | CTGAAG | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 162 |
| ErhI | CCWWGG | 1 cut(s) | 162 |
| FaiI | YATR | 1 cut(s) | 267 |
| FaqI | GGGAC | 2 cut(s) | 185, 320 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| Fnu4HI | GCNGC | 3 cut(s) | 114, 117, 120 |
| FokI | GGATG | 2 cut(s) | 107, 298 |
| Fsp4HI | GCNGC | 3 cut(s) | 114, 117, 120 |
| GluI | GCNGC | 3 cut(s) | 114, 117, 120 |
| GsaI | CCCAGC | 1 cut(s) | 79 |
| GsuI | CTGGAG | 1 cut(s) | 256 |
| HaeIII | GGCC | 1 cut(s) | 290 |
| HapII | CCGG | 1 cut(s) | 32 |
| HgaI | GACGC | 1 cut(s) | 201 |
| HincII | GTYRAC | 2 cut(s) | 6, 298 |
| HindII | GTYRAC | 2 cut(s) | 6, 298 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HinfI | GANTC | 1 cut(s) | 28 |
| HpaII | CCGG | 1 cut(s) | 32 |
| HphI | GGTGA | 2 cut(s) | 34, 37 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 216, 298 |
| Hpy188I | TCNGA | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 1 cut(s) | 273 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 216, 298 |
| HpyAV | CCTTC | 2 cut(s) | 185, 219 |
| HpyCH4III | ACNGT | 1 cut(s) | 249 |
| HpyCH4IV | ACGT | 1 cut(s) | 277 |
| HpyCH4V | TGCA | 3 cut(s) | 151, 245, 256 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 119 |
| HpySE526I | ACGT | 1 cut(s) | 277 |
| Kzo9I | GATC | 1 cut(s) | 54 |
| LpnPI | CCDG | 8 cut(s) | 8, 33, 45, 61, 222, 232, 286, 289 |
| Lsp1109I | GCAGC | 2 cut(s) | 125, 128 |
| MaeII | ACGT | 1 cut(s) | 277 |
| MaeIII | GTNAC | 2 cut(s) | 25, 154 |
| MalI | GATC | 1 cut(s) | 56 |
| MboI | GATC | 1 cut(s) | 54 |
| MboII | GAAGA | 2 cut(s) | 187, 234 |
| MflI | RGATCY | 1 cut(s) | 54 |
| MhlI | GDGCHC | 1 cut(s) | 42 |
| MluCI | AATT | 1 cut(s) | 170 |
| MlyI | GAGTC | 1 cut(s) | 22 |
| MnlI | CCTC | 5 cut(s) | 19, 55, 169, 280, 301 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 32 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 119 |
| NdeII | GATC | 1 cut(s) | 54 |
| NmuCI | GTSAC | 2 cut(s) | 25, 154 |
| PkrI | GCNGC | 3 cut(s) | 115, 118, 121 |
| PleI | GAGTC | 1 cut(s) | 22 |
| PpsI | GAGTC | 1 cut(s) | 22 |
| PspFI | CCCAGC | 1 cut(s) | 75 |
| PsuI | RGATCY | 1 cut(s) | 54 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SatI | GCNGC | 3 cut(s) | 114, 117, 120 |
| Sau3AI | GATC | 1 cut(s) | 54 |
| SchI | GAGTC | 1 cut(s) | 22 |
| SduI | GDGCHC | 1 cut(s) | 42 |
| SetI | ASST | 9 cut(s) | 11, 20, 47, 161, 183, 211, 230, 238, 280 |
| SmlI | CTYRAG | 1 cut(s) | 64 |
| SmoI | CTYRAG | 1 cut(s) | 64 |
| Sse9I | AATT | 1 cut(s) | 170 |
| SsiI | CCGC | 1 cut(s) | 119 |
| StyI | CCWWGG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 249 |
| TaiI | ACGT | 1 cut(s) | 280 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TasI | AATT | 1 cut(s) | 170 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TseFI | GTSAC | 2 cut(s) | 25, 154 |
| TseI | GCWGC | 2 cut(s) | 113, 116 |
| Tsp45I | GTSAC | 2 cut(s) | 25, 154 |
| TspDTI | ATGAA | 1 cut(s) | 204 |
| XmiI | GTMKAC | 1 cut(s) | 5 |