Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0016831

Physical Location & Seq

Genomic Coordinates Forward (+)

60235301 .. 60236768

Gene Structure 1468 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG342600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGAAGAAGCATTCAGAAAGCTCAACGGCTTCACCCCCACGTCCCAACCCGACCCCATTCCCGTCCCCTCCAAAAAGTCAACCGCCGCCGCCGCCTCAACCACCACCAACAAGCGCACCCTCAAGGACGCCCCCGCCGGCTCTGCCTCCACAATGCGATACCGCGGCGTTCGGCGCCGCCCGTGGGGCCGGTACGCTGCGGAGATCAGGGACCCGCACTCCAAGGAAAGACGGTGGCTCGGAACCTTCGACACCGCCGAGGAGGCTGCATGTGCCTACGACTACGCCGCCCGAACCATGCGCGGCGTCAAGGCCCGCACCAACTTCGTTTACCCCGCCACAACGCACGACCATCTCGTTCCGGCATTCACCTTCCACCACCCGAAGCAATCTCAGCCGTCGTTTAAGAACCAGAGCAACGCTCGCGGCTACGGTCAGTACGTTCCCAACTGGCCACCGTTTGCGACGTATCCAAATGATTTTTCCGGGTCTGGTTCCGACAGGAGTGGCACCACTACTAATACTGCTAACAGTACTGCTGCTTCTTTGAACATGCTTTTCTTGAGGAATTTCATCAATAGTTCTTCTCCATCCCAAAACTCTTCTTCGGTTGTCTCGCCAAACCCTCCTCACTCTCAAGCTCAGTGCTTTAGCCAAAACCAGTTTCAGTACACAAATGGCTCTTCTTCACCTAATTTCTCTTCTGGTGGTTGCAGTTCTTTTGTCAACAACAATACCACTACCTCTGGTACTACGACTAGTCATGGACGCTCATCTTCATCTTTGATGATGGATAGTACTAGTAGTGGTTGTGCTACTCACCATGAGCTTCCGGTCATGGAGAGCTCAAAAAAAGCAACCACCACCGCTACTAGTTTTGTTGACTCGGACTTCTTTCCTGTAGAGTCATCAGATACCGGGTTGTTAGAGGAGGTGATTCACCAGTTCTTCCCAAAGCCCTTTTCCAAGGAATCCGACCCTCCGAAATCTGTGGAGTATTATACTCCTACCTCCTTTAATTCAACGTTGGAGGTAAAAGAAGAGCAGCAGCCACATGTGTGTCCCGTTGATTTTGATTACCAGCAACAGCAGCAGCATCAACAACACCAACAACTTGGAAGTTTCAATGGAGTTCAGGAAGTGGCTGAGCAGACCGTACCGTTCTATAATGATCTGCCAGTGAACTTCCAGATGAACAGCGCAGATCACTCAATGGTGGTTATGGATCACAGCATGTTCCAGCAGTACTACTATCCTGAGTTTGTGGGTAGCTTGCAGAATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009889 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051726 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0080090 GO:0090708 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

428

Amino Acids

47.39

Weight (kDa)

6.43

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	53 - 102	4.6e-12	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016831)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25630
malus_domestica	MD13G1101100.v1.1 MD16G1101400.v1.1
prunus_persica	Prupe.1G245500_v2.0.a1
pyrus_communis	pycom13g08820 pycom16g08590
rosa_chinensis	RchiOBHm_Chr4g0433071
rosa_laevigata	RLG00000006789
rosa_multiflora	Rmu_sc0001190.1_g000018
rosa_rugosa	Rorug04G0265000
rosa_samantha	Rh4BG327200 Rh4CG342600 Rh4DG322200
rosa_wichuraiana	Rw4G027730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	174, 509
AccII	CGCG	3 cut(s)	165, 303, 426
AclI	AACGTT	1 cut(s)	1025
AclWI	GGATC	1 cut(s)	1233
AcoI	YGGCCR	1 cut(s)	452
AcsI	RAATTY	1 cut(s)	568
AcyI	GRCGYC	3 cut(s)	129, 175, 306
AfaI	GTAC	8 cut(s)	194, 440, 535, 671, 751, 799, 1158, 1247
AfiI	CCNNNNNNNGG	1 cut(s)	184
AflIII	ACRYGT	1 cut(s)	1054
AgsI	TTSAA	3 cut(s)	550, 1023, 1126
AhlI	ACTAGT	3 cut(s)	758, 800, 872
AjiI	CACGTC	1 cut(s)	42
AjuI	GAANNNNNNNTTGG	6 cut(s)	466, 498, 648, 680, 946, 978
AleI	CACNNNNGTG	1 cut(s)	1057
AluBI	AGCT	5 cut(s)	22, 641, 829, 846, 1272
AluI	AGCT	5 cut(s)	22, 641, 829, 846, 1272
Alw21I	GWGCWC	1 cut(s)	848
Alw26I	GTCTC	1 cut(s)	619
AlwI	GGATC	1 cut(s)	1233
AoxI	GGCC	3 cut(s)	187, 312, 452
ApeKI	GCWGC	7 cut(s)	197, 266, 539, 1045, 1048, 1090, 1093
ApoI	RAATTY	1 cut(s)	568
AspLEI	GCGC	4 cut(s)	117, 177, 303, 1202
AspS9I	GGNCC	3 cut(s)	187, 211, 313
AsuC2I	CCSGG	2 cut(s)	487, 919
AsuHPI	GGTGA	6 cut(s)	25, 361, 681, 812, 932, 946
AvaII	GGWCC	1 cut(s)	211
BalI	TGGCCA	1 cut(s)	454
BanI	GGYRCC	2 cut(s)	174, 509
BanII	GRGCYC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	526, 558
Bbv12I	GWGCWC	1 cut(s)	848
BbvI	GCAGC	7 cut(s)	184, 253, 526, 1057, 1060, 1102, 1105
BccI	CCATC	3 cut(s)	360, 598, 784
BceAI	ACGGC	2 cut(s)	43, 382
BcgI	CGANNNNNNTGC	4 cut(s)	248, 282, 307, 341
BciVI	GTATCC	1 cut(s)	480
BcnI	CCSGG	2 cut(s)	487, 919
BcoDI	GTCTC	1 cut(s)	619
BcuI	ACTAGT	3 cut(s)	758, 800, 872
BfaI	CTAG	3 cut(s)	759, 801, 873
BfmI	CTRYAG	1 cut(s)	900
BfoI	RGCGCY	1 cut(s)	178
BfuI	GTATCC	1 cut(s)	480
BglI	GCCNNNNNGGC	2 cut(s)	186, 263
BlpI	GCTNAGC	1 cut(s)	1146
BmcAI	AGTACT	3 cut(s)	535, 799, 1247
Bme1390I	CCNGG	2 cut(s)	487, 919
Bme18I	GGWCC	1 cut(s)	211
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	187, 211, 313
BmiI	GGNNCC	7 cut(s)	176, 188, 212, 213, 244, 496, 511
BmrFI	CCNGG	2 cut(s)	487, 919
BmsI	GCATC	1 cut(s)	1105
BplI	GAGNNNNNCTC	2 cut(s)	406, 438
Bpu1102I	GCTNAGC	1 cut(s)	1146
BpuEI	CTTGAG	3 cut(s)	107, 583, 621
BpuMI	CCSGG	2 cut(s)	487, 919
BsaHI	GRCGYC	3 cut(s)	129, 175, 306
BsaJI	CCNNGG	5 cut(s)	163, 182, 222, 258, 966
BsaWI	WCCGGW	1 cut(s)	832
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	1 cut(s)	184
Bse118I	RCCGGY	2 cut(s)	137, 189
Bse1I	ACTGG	4 cut(s)	455, 661, 943, 1178
BseDI	CCNNGG	5 cut(s)	163, 182, 222, 258, 966
BseGI	GGATG	1 cut(s)	590
BseLI	CCNNNNNNNGG	1 cut(s)	184
BseMII	CTCAG	4 cut(s)	407, 656, 1137, 1248
BseNI	ACTGG	4 cut(s)	455, 661, 943, 1178
BseRI	GAGGAG	3 cut(s)	275, 618, 944
BseXI	GCAGC	7 cut(s)	184, 253, 526, 1057, 1060, 1102, 1105
Bsh1236I	CGCG	3 cut(s)	165, 303, 426
BshFI	GGCC	3 cut(s)	189, 314, 454
BshNI	GGYRCC	2 cut(s)	174, 509
BsiHKAI	GWGCWC	1 cut(s)	848
BsiSI	CCGG	6 cut(s)	138, 190, 362, 486, 833, 918
BslFI	GGGAC	4 cut(s)	28, 50, 224, 1047
BslI	CCNNNNNNNGG	1 cut(s)	184
BsmAI	GTCTC	1 cut(s)	619
BsmFI	GGGAC	4 cut(s)	28, 50, 224, 1047
BsmI	GAATGC	3 cut(s)	11, 365, 1285
BsnI	GGCC	3 cut(s)	189, 314, 454
Bsp1286I	GDGCHC	1 cut(s)	848
Bsp143I	GATC	4 cut(s)	204, 1171, 1204, 1225
Bsp1720I	GCTNAGC	1 cut(s)	1146
BspANI	GGCC	3 cut(s)	189, 314, 454
BspCNI	CTCAG	4 cut(s)	406, 655, 1138, 1249
BspFNI	CGCG	3 cut(s)	165, 303, 426
BspLI	GGNNCC	7 cut(s)	176, 188, 212, 213, 244, 496, 511
BspPI	GGATC	1 cut(s)	1233
BspQI	GCTCTTC	2 cut(s)	688, 1035
BspT107I	GGYRCC	2 cut(s)	174, 509
BsrFI	RCCGGY	2 cut(s)	137, 189
BsrI	ACTGG	4 cut(s)	455, 661, 943, 1178
BssAI	RCCGGY	2 cut(s)	137, 189
BssECI	CCNNGG	5 cut(s)	163, 182, 222, 258, 966
BssMI	GATC	4 cut(s)	204, 1171, 1204, 1225
BssNI	GRCGYC	3 cut(s)	129, 175, 306
BssT1I	CCWWGG	2 cut(s)	222, 966
Bst4CI	ACNGT	6 cut(s)	234, 434, 459, 533, 1156, 1161
Bst6I	CTCTTC	4 cut(s)	607, 688, 706, 1035
BstACI	GRCGYC	3 cut(s)	129, 175, 306
BstC8I	GCNNGC	4 cut(s)	139, 316, 424, 1274
BstDEI	CTNAG	4 cut(s)	393, 642, 1146, 1257
BstDSI	CCRYGG	2 cut(s)	163, 182
BstF5I	GGATG	1 cut(s)	590
BstFNI	CGCG	3 cut(s)	165, 303, 426
BstH2I	RGCGCY	1 cut(s)	178
BstHHI	GCGC	4 cut(s)	117, 177, 303, 1202
BstKTI	GATC	4 cut(s)	207, 1174, 1207, 1228
BstMAI	GTCTC	1 cut(s)	619
BstMBI	GATC	4 cut(s)	204, 1171, 1204, 1225
BstMWI	GCNNNNNNNGC	9 cut(s)	92, 143, 174, 186, 263, 272, 394, 423, 1090
BstNSI	RCATGY	4 cut(s)	273, 556, 1058, 1237
BstSCI	CCNGG	2 cut(s)	485, 917
BstSFI	CTRYAG	1 cut(s)	900
BstUI	CGCG	3 cut(s)	165, 303, 426
BstV1I	GCAGC	7 cut(s)	184, 253, 526, 1057, 1060, 1102, 1105
BstXI	CCANNNNNNTGG	1 cut(s)	1115
BsuI	GTATCC	1 cut(s)	480
BsuRI	GGCC	3 cut(s)	189, 314, 454
BtgI	CCRYGG	2 cut(s)	163, 182
BtrI	CACGTC	1 cut(s)	42
BtsCI	GGATG	1 cut(s)	590
BtsIMutI	CAGTG	2 cut(s)	650, 1185
Cac8I	GCNNGC	4 cut(s)	139, 316, 424, 1274
CfoI	GCGC	4 cut(s)	117, 177, 303, 1202
Cfr10I	RCCGGY	2 cut(s)	137, 189
Cfr13I	GGNCC	3 cut(s)	187, 211, 313
Cfr42I	CCGCGG	1 cut(s)	166
CseI	GACGC	3 cut(s)	137, 295, 777
Csp6I	GTAC	8 cut(s)	193, 439, 534, 670, 750, 798, 1157, 1246
CviAII	CATG	8 cut(s)	270, 298, 553, 764, 824, 838, 1055, 1234
CviQI	GTAC	8 cut(s)	193, 439, 534, 670, 750, 798, 1157, 1246
DdeI	CTNAG	4 cut(s)	393, 642, 1146, 1257
DinI	GGCGCC	1 cut(s)	176
DpnI	GATC	4 cut(s)	206, 1173, 1206, 1227
DpnII	GATC	4 cut(s)	204, 1171, 1204, 1225
EaeI	YGGCCR	1 cut(s)	452
Eam1104I	CTCTTC	4 cut(s)	607, 688, 706, 1035
EarI	CTCTTC	4 cut(s)	607, 688, 706, 1035
Ecl136II	GAGCTC	1 cut(s)	846
Eco130I	CCWWGG	2 cut(s)	222, 966
Eco24I	GRGCYC	1 cut(s)	848
Eco47I	GGWCC	1 cut(s)	211
Eco53kI	GAGCTC	1 cut(s)	846
EcoICRI	GAGCTC	1 cut(s)	846
EcoO109I	RGGNCCY	1 cut(s)	211
EcoT14I	CCWWGG	2 cut(s)	222, 966
EcoT38I	GRGCYC	1 cut(s)	848
EgeI	GGCGCC	1 cut(s)	176
EheI	GGCGCC	1 cut(s)	176
ErhI	CCWWGG	2 cut(s)	222, 966
FaeI	CATG	8 cut(s)	273, 301, 556, 767, 827, 841, 1058, 1237
FaqI	GGGAC	4 cut(s)	28, 50, 224, 1047
FatI	CATG	8 cut(s)	269, 297, 552, 763, 823, 837, 1054, 1233
FauI	CCCGC	4 cut(s)	142, 222, 323, 343
FokI	GGATG	1 cut(s)	577
FriOI	GRGCYC	1 cut(s)	848
FspBI	CTAG	3 cut(s)	759, 801, 873
GlaI	GCGC	4 cut(s)	116, 176, 302, 1201
HaeII	RGCGCY	1 cut(s)	178
HaeIII	GGCC	3 cut(s)	189, 314, 454
HapII	CCGG	6 cut(s)	138, 190, 362, 486, 833, 918
HgaI	GACGC	3 cut(s)	137, 295, 777
HhaI	GCGC	4 cut(s)	117, 177, 303, 1202
Hin1I	GRCGYC	3 cut(s)	129, 175, 306
Hin1II	CATG	8 cut(s)	273, 301, 556, 767, 827, 841, 1058, 1237
Hin6I	GCGC	4 cut(s)	115, 175, 301, 1200
HinP1I	GCGC	4 cut(s)	115, 175, 301, 1200
HincII	GTYRAC	3 cut(s)	81, 727, 883
HindII	GTYRAC	3 cut(s)	81, 727, 883
HinfI	GANTC	4 cut(s)	884, 905, 937, 971
HpaII	CCGG	6 cut(s)	138, 190, 362, 486, 833, 918
HphI	GGTGA	6 cut(s)	25, 361, 681, 812, 932, 946
Hpy166II	GTNNAC	6 cut(s)	81, 331, 672, 727, 883, 1183
Hpy188I	TCNGA	7 cut(s)	17, 242, 499, 889, 913, 976, 984
Hpy188III	TCNNGA	4 cut(s)	562, 1136, 1189, 1256
Hpy8I	GTNNAC	6 cut(s)	81, 331, 672, 727, 883, 1183
Hpy99I	CGWCG	2 cut(s)	403, 469
HpyAV	CCTTC	2 cut(s)	256, 382
HpyCH4III	ACNGT	6 cut(s)	234, 434, 459, 533, 1156, 1161
HpyCH4IV	ACGT	4 cut(s)	41, 441, 467, 1025
HpyCH4V	TGCA	3 cut(s)	269, 714, 1276
HpyF10VI	GCNNNNNNNGC	9 cut(s)	92, 143, 174, 186, 263, 272, 394, 423, 1090
HpyF3I	CTNAG	4 cut(s)	393, 642, 1146, 1257
HpySE526I	ACGT	4 cut(s)	41, 441, 467, 1025
Hsp92I	GRCGYC	3 cut(s)	129, 175, 306
Hsp92II	CATG	8 cut(s)	273, 301, 556, 767, 827, 841, 1058, 1237
HspAI	GCGC	4 cut(s)	115, 175, 301, 1200
KasI	GGCGCC	1 cut(s)	174
KflI	GGGWCCC	1 cut(s)	211
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
KspI	CCGCGG	1 cut(s)	166
Kzo9I	GATC	4 cut(s)	204, 1171, 1204, 1225
LguI	GCTCTTC	2 cut(s)	688, 1035
Lsp1109I	GCAGC	7 cut(s)	184, 253, 526, 1057, 1060, 1102, 1105
LweI	GCATC	1 cut(s)	1105
MaeI	CTAG	3 cut(s)	759, 801, 873
MaeII	ACGT	4 cut(s)	41, 441, 467, 1025
MalI	GATC	4 cut(s)	206, 1173, 1206, 1227
MboI	GATC	4 cut(s)	204, 1171, 1204, 1225
MhlI	GDGCHC	1 cut(s)	848
MlsI	TGGCCA	1 cut(s)	454
MluCI	AATT	3 cut(s)	568, 694, 1018
MluNI	TGGCCA	1 cut(s)	454
Mly113I	GGCGCC	1 cut(s)	175
MlyI	GAGTC	2 cut(s)	878, 914
MmeI	TCCRAC	3 cut(s)	522, 999, 1008
Mox20I	TGGCCA	1 cut(s)	454
MroNI	GCCGGC	1 cut(s)	137
MscI	TGGCCA	1 cut(s)	454
MseI	TTAA	2 cut(s)	405, 1017
MslI	CAYNNNNRTG	1 cut(s)	1057
Msp20I	TGGCCA	1 cut(s)	454
MspA1I	CMGCKG	1 cut(s)	165
MspI	CCGG	6 cut(s)	138, 190, 362, 486, 833, 918
MspR9I	CCNGG	2 cut(s)	487, 919
Mva1269I	GAATGC	3 cut(s)	11, 365, 1285
MvnI	CGCG	3 cut(s)	165, 303, 426
MwoI	GCNNNNNNNGC	9 cut(s)	92, 143, 174, 186, 263, 272, 394, 423, 1090
NaeI	GCCGGC	1 cut(s)	139
NarI	GGCGCC	1 cut(s)	175
NciI	CCSGG	2 cut(s)	487, 919
NdeII	GATC	4 cut(s)	204, 1171, 1204, 1225
NgoMIV	GCCGGC	1 cut(s)	137
NlaIII	CATG	8 cut(s)	273, 301, 556, 767, 827, 841, 1058, 1237
NlaIV	GGNNCC	7 cut(s)	176, 188, 212, 213, 244, 496, 511
NmeAIII	GCCGAG	1 cut(s)	283
NspI	RCATGY	4 cut(s)	273, 556, 1058, 1237
OliI	CACNNNNGTG	1 cut(s)	1057
PciI	ACATGT	1 cut(s)	1054
PciSI	GCTCTTC	2 cut(s)	688, 1035
PcsI	WCGNNNNNNNCGW	4 cut(s)	246, 255, 354, 438
PctI	GAATGC	3 cut(s)	11, 365, 1285
PdiI	GCCGGC	1 cut(s)	139
PfeI	GAWTC	2 cut(s)	937, 971
PleI	GAGTC	2 cut(s)	878, 913
PluTI	GGCGCC	1 cut(s)	178
PpsI	GAGTC	2 cut(s)	878, 913
PpuMI	RGGWCCY	1 cut(s)	211
PscI	ACATGT	1 cut(s)	1054
Psp124BI	GAGCTC	1 cut(s)	848
Psp1406I	AACGTT	1 cut(s)	1025
Psp5II	RGGWCCY	1 cut(s)	211
PspN4I	GGNNCC	7 cut(s)	176, 188, 212, 213, 244, 496, 511
PspPI	GGNCC	3 cut(s)	187, 211, 313
PspPPI	RGGWCCY	1 cut(s)	211
RsaI	GTAC	8 cut(s)	194, 440, 535, 671, 751, 799, 1158, 1247
RsaNI	GTAC	8 cut(s)	193, 439, 534, 670, 750, 798, 1157, 1246
RseI	CAYNNNNRTG	1 cut(s)	1057
SacI	GAGCTC	1 cut(s)	848
SacII	CCGCGG	1 cut(s)	166
SapI	GCTCTTC	2 cut(s)	688, 1035
SaqAI	TTAA	2 cut(s)	405, 1017
Sau3AI	GATC	4 cut(s)	204, 1171, 1204, 1225
Sau96I	GGNCC	3 cut(s)	187, 211, 313
ScaI	AGTACT	3 cut(s)	535, 799, 1247
SchI	GAGTC	2 cut(s)	878, 914
ScrFI	CCNGG	2 cut(s)	487, 919
SduI	GDGCHC	1 cut(s)	848
SfaNI	GCATC	1 cut(s)	1105
SfcI	CTRYAG	1 cut(s)	900
SfoI	GGCGCC	1 cut(s)	176
Sfr303I	CCGCGG	1 cut(s)	166
SgrBI	CCGCGG	1 cut(s)	166
SinI	GGWCC	1 cut(s)	211
SmiMI	CAYNNNNRTG	1 cut(s)	1057
SmlI	CTYRAG	3 cut(s)	122, 562, 636
SmoI	CTYRAG	3 cut(s)	122, 562, 636
SpeI	ACTAGT	3 cut(s)	758, 800, 872
Sse9I	AATT	3 cut(s)	568, 694, 1018
SspDI	GGCGCC	1 cut(s)	174
SspMI	CTAG	3 cut(s)	759, 801, 873
SstI	GAGCTC	1 cut(s)	848
StyD4I	CCNGG	2 cut(s)	485, 917
StyI	CCWWGG	2 cut(s)	222, 966
TaaI	ACNGT	6 cut(s)	234, 434, 459, 533, 1156, 1161
TaiI	ACGT	4 cut(s)	44, 444, 470, 1028
TaqI	TCGA	1 cut(s)	249
TasI	AATT	3 cut(s)	568, 694, 1018
TatI	WGTACW	4 cut(s)	533, 669, 797, 1245
TauI	GCSGC	8 cut(s)	89, 92, 95, 168, 180, 290, 306, 429
TfiI	GAWTC	2 cut(s)	937, 971
Tru1I	TTAA	2 cut(s)	405, 1017
Tru9I	TTAA	2 cut(s)	405, 1017
TscAI	CASTG	2 cut(s)	650, 1185
TseI	GCWGC	7 cut(s)	197, 266, 539, 1045, 1048, 1090, 1093
TspDTI	ATGAA	3 cut(s)	562, 768, 1208
TspRI	CASTG	2 cut(s)	650, 1185
VpaK11BI	GGWCC	1 cut(s)	211
XapI	RAATTY	1 cut(s)	568
XceI	RCATGY	4 cut(s)	273, 556, 1058, 1237
XspI	CTAG	3 cut(s)	759, 801, 873
ZrmI	AGTACT	3 cut(s)	535, 799, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.