Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0013127

Physical Location & Seq

Genomic Coordinates Forward (+)

9260553 .. 9263505

Gene Structure 2953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG061900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGCGTTCAGCATCACACACCAGATCGGAGCACTGGCGGGGACGCCGATATCGGTGACGGAGCCGACCACGGCCTCCGGCGAATCGACGGCGAGCGTGAGCGCGTCCGCGGTGAGGAAGTCACCGGGGACGAGCCTGACGTGCAAAATTCAGAAGCCGGAGGTGAAGGACGGGATGCTAACCCCGCCTCTGAGCCCGTGCCGGTCGCCGGTTCTCGGGGCGACCCGGCCGGATCTGTCGGTGGCGTGCCAGGCGTACGCGGCGGAGGCGGAGGCTCCGGTTTTGGAGCACGAGGCGAGGGCCGTAAAGGAGAGGGTAAACGGCGTGCCGGTTTTTGTAATGATGCCGTTGGACAGCGTGACGATGAACCACACGGTGAATCGGAAGAAGGCGATGAACGCGAGTCTTCAGGCGTTGAAGAGCGCAGGGGTGGAGGGGATCATGATGGACGTGTGGTGGGGGTTGGTGGAGAGGGACGCGCCCGGCGCGTACAATTGGGGCGGTTACGCCGAGCTCTTGGAGATGGCCAAGAAACACGGCCTCAAAGTTCAGGCCGTCATGTCGTTCCACAAGTGTGGCGGTAACGTCGGGGACTCTTGCACTATTCCTTTACCCAGTTGGGTTGGGGAGGAGGTTAACAACGATCCAGACCTTGCGTACACTGATCAATGGGGAAATAGGAACTACGAGTATCTTTCACTTGGCGCTGATACACTTCCGGTCCTTAAAGGCCGCACGCCAGTGCAATGTTACGCGGACTTCATGCGTGCCTTCAGAGATAACTTCAAACACCTTCTTGGTGACACCATTGTGGAAATCCAAGTTGGAATGGGTCCAGCAGGTGAGCTCCGTTACCCTTCATATCCAGAGGGGGATGGGAGATGGTCATTTCCTGGAATTGGTGGCTTCCAATGTTTTGACAAGTATATGCTGAGTAGCTTAAAAGCTTATTGTGAATCTGAGGGTAAGCCAGAATGGGGTAGCACAGGCCCCACTGATGCCGGTCACTACAATAACTGGCCGGAAGATACCCCCTTCTTCAGAAGAGAAGGTGGAGGCTGGAATAGTAGTTACGGTGAATTCTTCCTCGGCTGGTACTCCCAGTTGCTCATGGACCATGGTGAGAGGATCCTTTCCTCAGCCAAGTCTATCTATGAGAATGAGGGTGTGAAAATCTCAGTAAAGATTGCAGGCATCCATTGGCATTATGGAACCCGGTCCCATGCCCCCGAGCTCACAGCAGGGTACTACAACACACGATTCCGGGATGGTTACCTACCCATTGCTCAGATGTTAGCCCGCCATGGTGCCATTTTCAATTTCACTTGCATCGAGATGCACGACCACGAGCAGCCACAGGACGCCCAATGTTCCCCTGAGAAGCTTGTTAGGCAAGTGGCCTTGGCCACTCAGAAGGCAGGAGTACCACTTGCAGGTGAAAATGCATTGCCAAGGTATGATGACTATGCACACGAGCAGATCTTGCAATCATCAGCGTTGAACATTGAGGGCAACACTGAAGGCAAGCAGATGTGTGCGTTTACATACTTGAGGATGAACCCGCAACTATTTCAGGGCGACAACTGGAGGCGTTTTGTGTCATTTGTGAAGAAAATGAAGGAAGGAAAGAACGCTTATAAGTGTAGGGAACAGGTGGAGAGGGAAGCCGAGCATTTCGTGCACGTTACAACACCTTTGGTGCAGGAGGCTGCTGTTGCTCTGATGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016052 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

Glyco_hydro_14

Protein Analysis

576

Amino Acids

63.72

Weight (kDa)

6.01

Isoelectric Point (pI)

40.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_14	PF01373	112 - 535	1e-173	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23920
fragaria_vesca	FvH4_4g05230
malus_domestica	MD12G1073900.v1.1 MD13G1226400.v1.1 MD16G1231500.v1.1
prunus_persica	Prupe.1G053800_v2.0.a1
pyrus_communis	pycom03g22190 pycom13g19950 pycom16g19370
rosa_chinensis	RchiOBHm_Chr4g0396151
rosa_laevigata	RLG00000009565
rosa_multiflora	Rmu_sc0006325.1_g000039
rosa_roxburghii	Rroxscaffold_5G00341000
rosa_rugosa	Rorug03G0351400
rosa_samantha	Rh4BG065100 Rh4CG071900 Rh4DG061900
rosa_wichuraiana	Rw4G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1638
AarI	CACCTGC	2 cut(s)	830, 1424
Acc36I	ACCTGC	2 cut(s)	830, 1424
AccB1I	GGYRCC	1 cut(s)	1307
AccII	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
AclWI	GGATC	5 cut(s)	240, 446, 638, 1123, 1136
AcoI	YGGCCR	4 cut(s)	227, 525, 1019, 1404
AcsI	RAATTY	2 cut(s)	147, 1079
AcuI	CTGAAG	4 cut(s)	392, 757, 1024, 1539
AcyI	GRCGYC	2 cut(s)	44, 1362
AdeI	CACNNNGTG	1 cut(s)	376
AfaI	GTAC	6 cut(s)	257, 491, 659, 1097, 1247, 1425
AfiI	CCNNNNNNNGG	6 cut(s)	114, 208, 215, 899, 977, 1433
AflIII	ACRYGT	1 cut(s)	450
AgsI	TTSAA	4 cut(s)	418, 787, 1318, 1501
AjiI	CACGTC	2 cut(s)	141, 451
AjnI	CCWGG	2 cut(s)	249, 892
AjuI	GAANNNNNNNTTGG	2 cut(s)	807, 839
AleI	CACNNNNGTG	3 cut(s)	573, 740, 809
AluBI	AGCT	6 cut(s)	514, 847, 939, 947, 1234, 1384
AluI	AGCT	6 cut(s)	514, 847, 939, 947, 1234, 1384
Alw21I	GWGCWC	6 cut(s)	34, 291, 516, 849, 1236, 1683
Alw44I	GTGCAC	1 cut(s)	1679
AlwI	GGATC	5 cut(s)	240, 446, 638, 1123, 1136
Ama87I	CYCGRG	2 cut(s)	215, 1229
ApaLI	GTGCAC	1 cut(s)	1679
ApeKI	GCWGC	2 cut(s)	1351, 1709
ApoI	RAATTY	2 cut(s)	147, 1079
AspLEI	GCGC	5 cut(s)	104, 425, 481, 488, 707
AspS9I	GGNCC	6 cut(s)	300, 721, 833, 989, 1114, 1218
AsuC2I	CCSGG	5 cut(s)	126, 226, 483, 1216, 1265
AvaI	CYCGRG	2 cut(s)	215, 1229
AvaII	GGWCC	4 cut(s)	721, 833, 1114, 1218
BaeGI	GKGCMC	1 cut(s)	1683
BalI	TGGCCA	2 cut(s)	527, 1406
BamHI	GGATCC	1 cut(s)	1128
BanI	GGYRCC	1 cut(s)	1307
BanII	GRGCYC	4 cut(s)	197, 516, 849, 1236
BauI	CACGAG	3 cut(s)	290, 1346, 1472
BbsI	GAAGAC	1 cut(s)	398
Bbv12I	GWGCWC	6 cut(s)	34, 291, 516, 849, 1236, 1683
BbvCI	CCTCAGC	1 cut(s)	1138
BbvI	GCAGC	2 cut(s)	1363, 1696
BccI	CCATC	5 cut(s)	439, 517, 869, 876, 1262
BceAI	ACGGC	7 cut(s)	87, 105, 287, 331, 337, 539, 553
BciT130I	CCWGG	2 cut(s)	251, 894
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	5 cut(s)	126, 226, 483, 1216, 1265
BfoI	RGCGCY	1 cut(s)	708
BfuAI	ACCTGC	2 cut(s)	830, 1424
BglII	AGATCT	1 cut(s)	1479
BisI	GCNGC	4 cut(s)	261, 733, 1352, 1710
BlsI	GCNGC	4 cut(s)	262, 734, 1353, 1711
Bme1390I	CCNGG	7 cut(s)	126, 226, 251, 483, 894, 1216, 1265
Bme18I	GGWCC	4 cut(s)	721, 833, 1114, 1218
BmeT110I	CYCGRG	2 cut(s)	215, 1229
BmgBI	CACGTC	2 cut(s)	141, 451
BmgT120I	GGNCC	6 cut(s)	300, 721, 833, 989, 1114, 1218
BmiI	GGNNCC	8 cut(s)	63, 276, 834, 991, 1130, 1213, 1220, 1309
BmrFI	CCNGG	7 cut(s)	126, 226, 251, 483, 894, 1216, 1265
BmrI	ACTGGG	2 cut(s)	609, 1096
BmsI	GCATC	8 cut(s)	21, 165, 333, 988, 1203, 1326, 1338, 1713
BmuI	ACTGGG	2 cut(s)	609, 1096
BpiI	GAAGAC	1 cut(s)	398
BpmI	CTGGAG	1 cut(s)	1606
Bpu10I	CCTNAGC	1 cut(s)	1138
BpuEI	CTTGAG	1 cut(s)	1570
BpuMI	CCSGG	5 cut(s)	126, 226, 483, 1216, 1265
BsaHI	GRCGYC	2 cut(s)	44, 1362
BsaJI	CCNNGG	8 cut(s)	69, 108, 125, 1087, 1117, 1303, 1401, 1451
BsaWI	WCCGGW	2 cut(s)	277, 718
Bsc4I	CCNNNNNNNGG	6 cut(s)	114, 208, 215, 899, 977, 1433
Bse118I	RCCGGY	4 cut(s)	201, 208, 328, 1001
Bse1I	ACTGG	6 cut(s)	39, 615, 740, 1022, 1102, 1589
Bse3DI	GCAATG	3 cut(s)	752, 1281, 1445
BseBI	CCWGG	2 cut(s)	251, 894
BseDI	CCNNGG	8 cut(s)	69, 108, 125, 1087, 1117, 1303, 1401, 1451
BseGI	GGATG	5 cut(s)	180, 880, 1194, 1273, 1560
BseLI	CCNNNNNNNGG	6 cut(s)	114, 208, 215, 899, 977, 1433
BseMI	GCAATG	3 cut(s)	752, 1281, 1445
BseMII	CTCAG	8 cut(s)	182, 923, 951, 1152, 1191, 1301, 1368, 1424
BseNI	ACTGG	6 cut(s)	39, 615, 740, 1022, 1102, 1589
BseRI	GAGGAG	1 cut(s)	644
BseSI	GKGCMC	1 cut(s)	1683
BseX3I	CGGCCG	1 cut(s)	227
BseXI	GCAGC	2 cut(s)	1363, 1696
BsgI	GTGCAG	1 cut(s)	1721
Bsh1236I	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
Bsh1285I	CGRYCG	2 cut(s)	206, 230
BshNI	GGYRCC	1 cut(s)	1307
BsiEI	CGRYCG	2 cut(s)	206, 230
BsiHKAI	GWGCWC	6 cut(s)	34, 291, 516, 849, 1236, 1683
BsiHKCI	CYCGRG	2 cut(s)	215, 1229
BsiWI	CGTACG	1 cut(s)	255
BslFI	GGGAC	5 cut(s)	55, 142, 488, 605, 1204
BslI	CCNNNNNNNGG	6 cut(s)	114, 208, 215, 899, 977, 1433
BsmFI	GGGAC	5 cut(s)	55, 142, 488, 605, 1204
BsoBI	CYCGRG	2 cut(s)	215, 1229
Bsp1286I	GDGCHC	7 cut(s)	34, 197, 291, 516, 849, 1236, 1683
Bsp143I	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
Bsp19I	CCATGG	2 cut(s)	1117, 1303
BspCNI	CTCAG	8 cut(s)	183, 924, 952, 1151, 1190, 1300, 1369, 1423
BspFNI	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
BspHI	TCATGA	1 cut(s)	441
BspLI	GGNNCC	8 cut(s)	63, 276, 834, 991, 1130, 1213, 1220, 1309
BspMI	ACCTGC	2 cut(s)	830, 1424
BspPI	GGATC	5 cut(s)	240, 446, 638, 1123, 1136
BspQI	GCTCTTC	1 cut(s)	413
BspT107I	GGYRCC	1 cut(s)	1307
BsrDI	GCAATG	3 cut(s)	752, 1281, 1445
BsrFI	RCCGGY	4 cut(s)	201, 208, 328, 1001
BsrI	ACTGG	6 cut(s)	39, 615, 740, 1022, 1102, 1589
BssAI	RCCGGY	4 cut(s)	201, 208, 328, 1001
BssECI	CCNNGG	8 cut(s)	69, 108, 125, 1087, 1117, 1303, 1401, 1451
BssMI	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
BssNI	GRCGYC	2 cut(s)	44, 1362
BssSI	CACGAG	3 cut(s)	290, 1346, 1472
BssT1I	CCWWGG	4 cut(s)	1117, 1303, 1401, 1451
Bst2BI	CACGAG	3 cut(s)	290, 1346, 1472
Bst2UI	CCWGG	2 cut(s)	251, 894
Bst4CI	ACNGT	2 cut(s)	376, 1076
Bst6I	CTCTTC	2 cut(s)	413, 1039
BstACI	GRCGYC	2 cut(s)	44, 1362
BstAPI	GCANNNNNTGC	2 cut(s)	1483, 1678
BstC8I	GCNNGC	8 cut(s)	94, 247, 326, 737, 768, 1192, 1300, 1526
BstDEI	CTNAG	8 cut(s)	191, 932, 960, 1138, 1177, 1287, 1377, 1410
BstDSI	CCRYGG	4 cut(s)	69, 108, 1117, 1303
BstEII	GGTNACC	1 cut(s)	1271
BstF5I	GGATG	5 cut(s)	180, 880, 1194, 1273, 1560
BstFNI	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
BstH2I	RGCGCY	1 cut(s)	708
BstHHI	GCGC	5 cut(s)	104, 425, 481, 488, 707
BstKTI	GATC	7 cut(s)	27, 235, 441, 646, 667, 1131, 1482
BstMBI	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
BstMCI	CGRYCG	2 cut(s)	206, 230
BstNI	CCWGG	2 cut(s)	251, 894
BstPI	GGTNACC	1 cut(s)	1271
BstSCI	CCNGG	7 cut(s)	124, 224, 249, 481, 892, 1214, 1263
BstSLI	GKGCMC	1 cut(s)	1683
BstUI	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
BstV1I	GCAGC	2 cut(s)	1363, 1696
BstV2I	GAAGAC	1 cut(s)	398
BstX2I	RGATCY	3 cut(s)	232, 1128, 1479
BstXI	CCANNNNNNTGG	1 cut(s)	575
BstYI	RGATCY	3 cut(s)	232, 1128, 1479
BstZI	CGGCCG	1 cut(s)	227
BtgI	CCRYGG	4 cut(s)	69, 108, 1117, 1303
BtgZI	GCGATG	1 cut(s)	407
BtrI	CACGTC	2 cut(s)	141, 451
BtsCI	GGATG	5 cut(s)	180, 880, 1194, 1273, 1560
BtsIMutI	CAGTG	6 cut(s)	32, 660, 747, 993, 1515, 1726
BveI	ACCTGC	2 cut(s)	830, 1424
Cac8I	GCNNGC	8 cut(s)	94, 247, 326, 737, 768, 1192, 1300, 1526
CciI	TCATGA	1 cut(s)	441
CfoI	GCGC	5 cut(s)	104, 425, 481, 488, 707
Cfr10I	RCCGGY	4 cut(s)	201, 208, 328, 1001
Cfr13I	GGNCC	6 cut(s)	300, 721, 833, 989, 1114, 1218
Cfr42I	CCGCGG	1 cut(s)	111
CseI	GACGC	4 cut(s)	52, 93, 485, 1370
Csp6I	GTAC	6 cut(s)	256, 490, 658, 1096, 1246, 1424
CviAII	CATG	7 cut(s)	442, 559, 763, 1111, 1118, 1223, 1304
CviQI	GTAC	6 cut(s)	256, 490, 658, 1096, 1246, 1424
DdeI	CTNAG	8 cut(s)	191, 932, 960, 1138, 1177, 1287, 1377, 1410
DpnI	GATC	7 cut(s)	26, 234, 440, 645, 666, 1130, 1481
DpnII	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
DraIII	CACNNNGTG	1 cut(s)	376
EaeI	YGGCCR	4 cut(s)	227, 525, 1019, 1404
EagI	CGGCCG	1 cut(s)	227
Eam1104I	CTCTTC	2 cut(s)	413, 1039
EarI	CTCTTC	2 cut(s)	413, 1039
EciI	GGCGGA	2 cut(s)	278, 284
Ecl136II	GAGCTC	3 cut(s)	514, 847, 1234
EclXI	CGGCCG	1 cut(s)	227
Eco130I	CCWWGG	4 cut(s)	1117, 1303, 1401, 1451
Eco24I	GRGCYC	4 cut(s)	197, 516, 849, 1236
Eco32I	GATATC	1 cut(s)	51
Eco47I	GGWCC	4 cut(s)	721, 833, 1114, 1218
Eco52I	CGGCCG	1 cut(s)	227
Eco53kI	GAGCTC	3 cut(s)	514, 847, 1234
Eco57I	CTGAAG	4 cut(s)	392, 757, 1024, 1539
Eco88I	CYCGRG	2 cut(s)	215, 1229
Eco91I	GGTNACC	1 cut(s)	1271
EcoICRI	GAGCTC	3 cut(s)	514, 847, 1234
EcoO109I	RGGNCCY	1 cut(s)	989
EcoO65I	GGTNACC	1 cut(s)	1271
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	2 cut(s)	249, 892
EcoRV	GATATC	1 cut(s)	51
EcoT14I	CCWWGG	4 cut(s)	1117, 1303, 1401, 1451
EcoT22I	ATGCAT	1 cut(s)	1447
EcoT38I	GRGCYC	4 cut(s)	197, 516, 849, 1236
ErhI	CCWWGG	4 cut(s)	1117, 1303, 1401, 1451
FaeI	CATG	7 cut(s)	445, 562, 766, 1114, 1121, 1226, 1307
FaqI	GGGAC	5 cut(s)	55, 142, 488, 605, 1204
FatI	CATG	7 cut(s)	441, 558, 762, 1110, 1117, 1222, 1303
FauI	CCCGC	4 cut(s)	31, 192, 1307, 1569
FbaI	TGATCA	1 cut(s)	664
Fnu4HI	GCNGC	4 cut(s)	261, 733, 1352, 1710
FokI	GGATG	5 cut(s)	187, 887, 1181, 1280, 1567
FriOI	GRGCYC	4 cut(s)	197, 516, 849, 1236
Fsp4HI	GCNGC	4 cut(s)	261, 733, 1352, 1710
GlaI	GCGC	5 cut(s)	103, 424, 480, 487, 706
GluI	GCNGC	4 cut(s)	261, 733, 1352, 1710
GsuI	CTGGAG	1 cut(s)	1606
HaeII	RGCGCY	1 cut(s)	708
HgaI	GACGC	4 cut(s)	52, 93, 485, 1370
HhaI	GCGC	5 cut(s)	104, 425, 481, 488, 707
Hin1I	GRCGYC	2 cut(s)	44, 1362
Hin1II	CATG	7 cut(s)	445, 562, 766, 1114, 1121, 1226, 1307
Hin6I	GCGC	5 cut(s)	102, 423, 479, 486, 705
HinP1I	GCGC	5 cut(s)	102, 423, 479, 486, 705
HincII	GTYRAC	1 cut(s)	637
HindII	GTYRAC	1 cut(s)	637
HindIII	AAGCTT	2 cut(s)	945, 1382
HinfI	GANTC	6 cut(s)	83, 379, 403, 593, 956, 1260
HpaI	GTTAAC	1 cut(s)	637
Hpy166II	GTNNAC	5 cut(s)	319, 637, 660, 1542, 1681
Hpy188III	TCNNGA	4 cut(s)	442, 647, 866, 1333
Hpy8I	GTNNAC	5 cut(s)	319, 637, 660, 1542, 1681
Hpy99I	CGWCG	2 cut(s)	91, 590
HpyCH4III	ACNGT	2 cut(s)	376, 1076
HpyCH4IV	ACGT	4 cut(s)	140, 450, 585, 1683
HpyF3I	CTNAG	8 cut(s)	191, 932, 960, 1138, 1177, 1287, 1377, 1410
HpySE526I	ACGT	4 cut(s)	140, 450, 585, 1683
Hsp92I	GRCGYC	2 cut(s)	44, 1362
Hsp92II	CATG	7 cut(s)	445, 562, 766, 1114, 1121, 1226, 1307
HspAI	GCGC	5 cut(s)	102, 423, 479, 486, 705
Ksp22I	TGATCA	1 cut(s)	664
KspAI	GTTAAC	1 cut(s)	637
KspI	CCGCGG	1 cut(s)	111
Kzo9I	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
LguI	GCTCTTC	1 cut(s)	413
LmnI	GCTCC	5 cut(s)	29, 61, 280, 286, 852
Lsp1109I	GCAGC	2 cut(s)	1363, 1696
LweI	GCATC	8 cut(s)	21, 165, 333, 988, 1203, 1326, 1338, 1713
MaeII	ACGT	4 cut(s)	140, 450, 585, 1683
MalI	GATC	7 cut(s)	26, 234, 440, 645, 666, 1130, 1481
MboI	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
MboII	GAAGA	8 cut(s)	397, 398, 430, 1030, 1037, 1056, 1075, 1621
MfeI	CAATTG	1 cut(s)	493
MflI	RGATCY	3 cut(s)	232, 1128, 1479
MhlI	GDGCHC	7 cut(s)	34, 197, 291, 516, 849, 1236, 1683
MlsI	TGGCCA	2 cut(s)	527, 1406
MluCI	AATT	5 cut(s)	147, 493, 897, 1079, 1318
MluNI	TGGCCA	2 cut(s)	527, 1406
MlyI	GAGTC	2 cut(s)	412, 587
MmeI	TCCRAC	2 cut(s)	330, 805
Mox20I	TGGCCA	2 cut(s)	527, 1406
Mph1103I	ATGCAT	1 cut(s)	1447
MscI	TGGCCA	2 cut(s)	527, 1406
MseI	TTAA	3 cut(s)	636, 726, 941
MslI	CAYNNNNRTG	4 cut(s)	573, 740, 809, 1334
Msp20I	TGGCCA	2 cut(s)	527, 1406
MspA1I	CMGCKG	1 cut(s)	110
MspR9I	CCNGG	7 cut(s)	126, 226, 251, 483, 894, 1216, 1265
MunI	CAATTG	1 cut(s)	493
MvaI	CCWGG	2 cut(s)	251, 894
MvnI	CGCG	7 cut(s)	104, 110, 260, 401, 479, 488, 755
NciI	CCSGG	5 cut(s)	126, 226, 483, 1216, 1265
NcoI	CCATGG	2 cut(s)	1117, 1303
NdeII	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
NlaIII	CATG	7 cut(s)	445, 562, 766, 1114, 1121, 1226, 1307
NlaIV	GGNNCC	8 cut(s)	63, 276, 834, 991, 1130, 1213, 1220, 1309
NmeAIII	GCCGAG	3 cut(s)	535, 1068, 1693
NmuCI	GTSAC	5 cut(s)	55, 120, 358, 800, 1004
NsiI	ATGCAT	1 cut(s)	1447
OliI	CACNNNNGTG	3 cut(s)	573, 740, 809
PagI	TCATGA	1 cut(s)	441
PaqCI	CACCTGC	2 cut(s)	830, 1424
PciSI	GCTCTTC	1 cut(s)	413
PcsI	WCGNNNNNNNCGW	2 cut(s)	137, 1338
PfeI	GAWTC	4 cut(s)	83, 379, 956, 1260
Pfl23II	CGTACG	1 cut(s)	255
PfoI	TCCNGGA	2 cut(s)	892, 1263
PkrI	GCNGC	4 cut(s)	262, 734, 1353, 1711
PleI	GAGTC	2 cut(s)	411, 587
PpsI	GAGTC	2 cut(s)	411, 587
PsiI	TTATAA	1 cut(s)	1638
Psp124BI	GAGCTC	3 cut(s)	516, 849, 1236
Psp6I	CCWGG	2 cut(s)	249, 892
PspEI	GGTNACC	1 cut(s)	1271
PspGI	CCWGG	2 cut(s)	249, 892
PspLI	CGTACG	1 cut(s)	255
PspN4I	GGNNCC	8 cut(s)	63, 276, 834, 991, 1130, 1213, 1220, 1309
PspPI	GGNCC	6 cut(s)	300, 721, 833, 989, 1114, 1218
PsuI	RGATCY	3 cut(s)	232, 1128, 1479
RsaI	GTAC	6 cut(s)	257, 491, 659, 1097, 1247, 1425
RsaNI	GTAC	6 cut(s)	256, 490, 658, 1096, 1246, 1424
RseI	CAYNNNNRTG	4 cut(s)	573, 740, 809, 1334
SacI	GAGCTC	3 cut(s)	516, 849, 1236
SacII	CCGCGG	1 cut(s)	111
SapI	GCTCTTC	1 cut(s)	413
SaqAI	TTAA	3 cut(s)	636, 726, 941
SatI	GCNGC	4 cut(s)	261, 733, 1352, 1710
Sau3AI	GATC	7 cut(s)	24, 232, 438, 643, 664, 1128, 1479
Sau96I	GGNCC	6 cut(s)	300, 721, 833, 989, 1114, 1218
SchI	GAGTC	2 cut(s)	412, 587
ScrFI	CCNGG	7 cut(s)	126, 226, 251, 483, 894, 1216, 1265
SduI	GDGCHC	7 cut(s)	34, 197, 291, 516, 849, 1236, 1683
SfaNI	GCATC	8 cut(s)	21, 165, 333, 988, 1203, 1326, 1338, 1713
Sfr303I	CCGCGG	1 cut(s)	111
SgrBI	CCGCGG	1 cut(s)	111
SinI	GGWCC	4 cut(s)	721, 833, 1114, 1218
SmiMI	CAYNNNNRTG	4 cut(s)	573, 740, 809, 1334
SmlI	CTYRAG	1 cut(s)	1549
SmoI	CTYRAG	1 cut(s)	1549
Sse9I	AATT	5 cut(s)	147, 493, 897, 1079, 1318
SstI	GAGCTC	3 cut(s)	516, 849, 1236
StyD4I	CCNGG	7 cut(s)	124, 224, 249, 481, 892, 1214, 1263
StyI	CCWWGG	4 cut(s)	1117, 1303, 1401, 1451
TaaI	ACNGT	2 cut(s)	376, 1076
TaiI	ACGT	4 cut(s)	143, 453, 588, 1686
TaqI	TCGA	2 cut(s)	86, 1332
TasI	AATT	5 cut(s)	147, 493, 897, 1079, 1318
TauI	GCSGC	2 cut(s)	263, 735
TfiI	GAWTC	4 cut(s)	83, 379, 956, 1260
Tru1I	TTAA	3 cut(s)	636, 726, 941
Tru9I	TTAA	3 cut(s)	636, 726, 941
TscAI	CASTG	5 cut(s)	39, 667, 747, 1000, 1522
TseFI	GTSAC	5 cut(s)	55, 120, 358, 800, 1004
TseI	GCWGC	2 cut(s)	1351, 1709
Tsp45I	GTSAC	5 cut(s)	55, 120, 358, 800, 1004
TspDTI	ATGAA	6 cut(s)	380, 410, 751, 849, 1571, 1631
TspGWI	ACGGA	2 cut(s)	74, 839
TspRI	CASTG	5 cut(s)	39, 667, 747, 1000, 1522
VneI	GTGCAC	1 cut(s)	1679
VpaK11BI	GGWCC	4 cut(s)	721, 833, 1114, 1218
XapI	RAATTY	2 cut(s)	147, 1079
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1205
Zsp2I	ATGCAT	1 cut(s)	1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.