Rh4DG219700

Belongs to the adaptor complexes medium subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0007388
Physical Location & Seq
Forward (+)
42054181 .. 42059088
4908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG219700.1

Sequence Viewer

Length: 2010 bp
ATGCCCCAAGGTAGTAGCATCAGAGCCATCTGGATCCTCAACAGCCTCGACGCCGTCGTCTTCTCCAGGAGGTTTCCGGTGGTGGAGAAGCGGTGGCGGGGAGCTTGCAAGGAGAGCTCTACTGATGGCGGTCTCAATGACACTGTGTTTCCTTTACTTCCTAGTGATTCCGAGTTAGCTGCTGCATTTGTGGACAGAAAGAGAAGAGAGGGCTCTATTCGTGGGTGTGGAATACGTGTAAGTCAGTCAGCTAAAGGCTCAGATTCTTGGGTTGATGATCCAATTACCCGTCATATAATTGGAATTTACATATGCAAAGAAAAGGAAGGGGATGGCAATAATGATAAAAATAATTTGCTGTGGCCTTTAGTCTTGCACACAAAGGGCCATTTTTGCATCCTGATATTGCCTTTAGTAGAGCCGAGGCATTTGAAGGCATATGCAAGATTATGTAATAGATCTGATTGTGGCAATGCTGTTGGTGTGGAGGACAATATATCTTCCATTCTGCTCGATCTTCCATCCATCACAGGGGCATTTATGGCGGCACATGCAATTGGTGACATAATAACTGGCGACGTTGTGGAACCTGAGGTAGTTGTCAATGCGTCTCCATCTGTTGGAGGTTTATTGGATTCACTAACTGGGAGCATAGGAATATCGAGCATTTCCTCAAGGGCAAAACCTATTGCTGCACCAGTTGCATCCTCGAGCCCTACTAGCAGTGCTGTGACTGGAACTGTGACATCAGATGCTAACAAGACTGGCTCTAGGCCTTTAGATAAAGATGCACTTCGAACTTTCATAAGCAGTTCAATGCCCTTTGGAACGCTGATGGATTTGAGCTTCCCCAATATCATTTCCATTAAGGCTAATGGTTTTTCGTCATCAGATCTTCCTCCTTCAGACCTGAAGCAACCAGCATGGAAGCCTTACCTATACAAAGGAAGGCAGAGAATTCTATTTTCTATTCATGAGACTGTCCATGCTGCTATGTACGACCGAGATGAGATTCCAGATAGTATATTAATTTCTGGACATATAAATTGCCGAGCAGAGTTAGAAGGATTGCCTGATGTGTCCTTCCCCTTGATAGGACTGAACTCAAATAAGATTGAAGTTTTATCATTTCATCCTTGTGCTCAAGTTCCAGAACAAGGTGTTGATAAGCAGGCTGTGATGTTTTCACCACCATTAGGTAATTTTGCTTTAATGCGTTACCAAGCAGTCTGTGGTATTGGACCACCCATAAAGGGATTTTACCAATTGTCTATGGTATCTGAGGATAAAGGTGATTTTTTATTCAAATTGCGGCTAATGGATGGTTACAAGTCTCCTCTCACAATGGAGTTTTGTACTGTGACTATGCCTTTTCCAAGGAGACGGGTTGTATCTTTTGATGGGACTCCCTCGGTCGGAATAGTTTCAACTACAGAGCATTCTGTTGAATGGAAGATTATAATGGGCGGGCGGGGTCTTAGTGGGAAAAGTATCGAGGCAACTTTTCCTGGTAAAGTCCAGTTTGCACCATGGAAACCCCAAATATTACCTCCGTCTAGTTTGGCCTTTGGAATCATAACTGATGAAGATAGTGATATTGAGACGGATGGTAATAATAATAGTATGGTCAATGTAGAGGAGTTCTTAATGGAGAAAATGAGCAAGGATCTTCATCCTGCCGATCTGGAGGAGCCATTTTGCTGGCATGCATACAACTATGCCAAGGTATTTTCTATTTCTGTTTGCTTTCTCAAATTTAACTGGACATGTTATGAACTCAAAATTACCTCAGCCCATAATTGGTTTAAAAGGGTTTGTGTACAAAGTGTTTACAAATTCATTGAAGAGCTAGCTTTTACAGAGGCACGGTCTGACTCATGTTTACAGGTGTCCTTCAAAATTGTTGGAGCTTCATTGTCTGGAATGTCAATTGATCCGAAATCTGTAAGTTGTGACTCCTTTATTTATGCTCTCACATCATTACAGCAACCCAGAGATAAGGAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Adap_comp_sub

Protein Analysis

669

Amino Acids

73.34

Weight (kDa)

5.88

Isoelectric Point (pI)

54.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adap_comp_sub PF00928 308 - 502 5e-27 Adaptor complexes medium subunit family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1460
AasI GACNNNNNNGTC 1 cut(s) 56
AccB7I CCANNNNNTGG 1 cut(s) 620
AciI CCGC 7 cut(s) 91, 97, 129, 545, 1312, 1467, 1471
AclWI GGATC 5 cut(s) 28, 41, 272, 1674, 1928
AcsI RAATTY 4 cut(s) 303, 957, 1754, 1835
AcuI CTGAAG 2 cut(s) 888, 932
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 3 cut(s) 998, 1357, 1821
AfiI CCNNNNNNNGG 8 cut(s) 531, 620, 1094, 1157, 1196, 1253, 1415, 1800
AflIII ACRYGT 2 cut(s) 235, 1766
AgsI TTSAA 8 cut(s) 433, 816, 1118, 1306, 1428, 1448, 1844, 1897
AjnI CCWGG 2 cut(s) 65, 1507
AluBI AGCT 8 cut(s) 104, 117, 179, 251, 846, 1849, 1853, 1910
AluI AGCT 8 cut(s) 104, 117, 179, 251, 846, 1849, 1853, 1910
Alw21I GWGCWC 2 cut(s) 119, 1144
Alw26I GTCTC 6 cut(s) 137, 615, 971, 1338, 1375, 1595
AlwI GGATC 5 cut(s) 28, 41, 272, 1674, 1928
Ama87I CYCGRG 1 cut(s) 709
AoxI GGCC 4 cut(s) 362, 385, 773, 1563
ApeKI GCWGC 4 cut(s) 179, 182, 692, 989
ApoI RAATTY 4 cut(s) 303, 957, 1754, 1835
AseI ATTAAT 1 cut(s) 1028
Asp700I GAANNNNTTC 1 cut(s) 1423
AspS9I GGNCC 2 cut(s) 385, 1241
AsuHPI GGTGA 3 cut(s) 572, 1179, 1304
AsuII TTCGAA 1 cut(s) 796
AsuNHI GCTAGC 1 cut(s) 1849
AvaI CYCGRG 1 cut(s) 709
AvaII GGWCC 1 cut(s) 1241
AxyI CCTNAGG 1 cut(s) 591
BamHI GGATCC 1 cut(s) 33
BanII GRGCYC 3 cut(s) 119, 215, 716
BbsI GAAGAC 1 cut(s) 52
Bbv12I GWGCWC 2 cut(s) 119, 1144
BbvCI CCTCAGC 1 cut(s) 1789
BbvI GCAGC 4 cut(s) 166, 169, 679, 976
BceAI ACGGC 1 cut(s) 38
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 2 cut(s) 67, 1509
BcoDI GTCTC 6 cut(s) 137, 615, 971, 1338, 1375, 1595
BfaI CTAG 5 cut(s) 162, 720, 771, 1557, 1850
BfmI CTRYAG 1 cut(s) 1431
BglII AGATCT 2 cut(s) 458, 892
BisI GCNGC 6 cut(s) 180, 183, 546, 693, 990, 1313
BlsI GCNGC 6 cut(s) 181, 184, 547, 694, 991, 1314
Bme1390I CCNGG 2 cut(s) 67, 1509
Bme18I GGWCC 1 cut(s) 1241
BmeT110I CYCGRG 1 cut(s) 709
BmgT120I GGNCC 2 cut(s) 385, 1241
BmiI GGNNCC 3 cut(s) 35, 588, 1692
BmrFI CCNGG 2 cut(s) 67, 1509
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 5 cut(s) 27, 405, 713, 742, 778
BmtI GCTAGC 1 cut(s) 1853
BmuI ACTGGG 1 cut(s) 654
BpiI GAAGAC 1 cut(s) 52
BpmI CTGGAG 2 cut(s) 49, 1706
Bpu10I CCTNAGC 1 cut(s) 1789
Bpu14I TTCGAA 1 cut(s) 796
BpuEI CTTGAG 2 cut(s) 658, 1128
BsaAI YACGTR 1 cut(s) 236
BsaBI GATNNNNATC 1 cut(s) 1671
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 137
BsaJI CCNNGG 6 cut(s) 7, 422, 1376, 1410, 1529, 1722
BsaWI WCCGGW 1 cut(s) 76
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 8 cut(s) 531, 620, 1094, 1157, 1196, 1253, 1415, 1800
Bse1I ACTGG 7 cut(s) 577, 649, 698, 739, 769, 1519, 1766
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 1 cut(s) 478
Bse8I GATNNNNATC 1 cut(s) 1671
BseBI CCWGG 2 cut(s) 67, 1509
BseDI CCNNGG 6 cut(s) 7, 422, 1376, 1410, 1529, 1722
BseGI GGATG 8 cut(s) 337, 396, 521, 704, 1132, 1327, 1612, 1672
BseJI GATNNNNATC 1 cut(s) 1671
BseLI CCNNNNNNNGG 8 cut(s) 531, 620, 1094, 1157, 1196, 1253, 1415, 1800
BseMI GCAATG 1 cut(s) 478
BseMII CTCAG 4 cut(s) 273, 582, 1272, 1803
BseNI ACTGG 7 cut(s) 577, 649, 698, 739, 769, 1519, 1766
BseRI GAGGAG 3 cut(s) 1326, 1652, 1703
BseXI GCAGC 4 cut(s) 166, 169, 679, 976
BsgI GTGCAG 1 cut(s) 678
Bsh1285I CGRYCG 2 cut(s) 1003, 1416
BshFI GGCC 4 cut(s) 364, 387, 775, 1565
BsiEI CGRYCG 2 cut(s) 1003, 1416
BsiHKAI GWGCWC 2 cut(s) 119, 1144
BsiHKCI CYCGRG 1 cut(s) 709
BsiSI CCGG 1 cut(s) 77
BslFI GGGAC 1 cut(s) 1417
BslI CCNNNNNNNGG 8 cut(s) 531, 620, 1094, 1157, 1196, 1253, 1415, 1800
BsmAI GTCTC 6 cut(s) 137, 615, 971, 1338, 1375, 1595
BsmBI CGTCTC 3 cut(s) 615, 1375, 1595
BsmFI GGGAC 1 cut(s) 1417
BsmI GAATGC 1 cut(s) 1438
BsnI GGCC 4 cut(s) 364, 387, 775, 1565
Bso31I GGTCTC 1 cut(s) 137
BsoBI CYCGRG 1 cut(s) 709
Bsp119I TTCGAA 1 cut(s) 796
Bsp1286I GDGCHC 4 cut(s) 119, 215, 716, 1144
Bsp1407I TGTACA 1 cut(s) 1819
Bsp143I GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
Bsp19I CCATGG 1 cut(s) 1529
BspACI CCGC 7 cut(s) 91, 97, 129, 545, 1312, 1467, 1471
BspANI GGCC 4 cut(s) 364, 387, 775, 1565
BspCNI CTCAG 4 cut(s) 272, 583, 1273, 1802
BspHI TCATGA 1 cut(s) 973
BspLI GGNNCC 3 cut(s) 35, 588, 1692
BspOI GCTAGC 1 cut(s) 1853
BspPI GGATC 5 cut(s) 28, 41, 272, 1674, 1928
BspQI GCTCTTC 1 cut(s) 1839
BspT104I TTCGAA 1 cut(s) 796
BspTNI GGTCTC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 478
BsrGI TGTACA 1 cut(s) 1819
BsrI ACTGG 7 cut(s) 577, 649, 698, 739, 769, 1519, 1766
BssECI CCNNGG 6 cut(s) 7, 422, 1376, 1410, 1529, 1722
BssMI GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 4 cut(s) 7, 1376, 1529, 1722
Bst2UI CCWGG 2 cut(s) 67, 1509
Bst4CI ACNGT 5 cut(s) 145, 742, 982, 1360, 1869
Bst6I CTCTTC 2 cut(s) 199, 1839
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 1 cut(s) 701
BstAUI TGTACA 1 cut(s) 1819
BstBAI YACGTR 1 cut(s) 236
BstBI TTCGAA 1 cut(s) 796
BstC8I GCNNGC 6 cut(s) 106, 1173, 1469, 1703, 1707, 1851
BstDEI CTNAG 5 cut(s) 259, 591, 1281, 1478, 1789
BstDSI CCRYGG 1 cut(s) 1529
BstF5I GGATG 8 cut(s) 337, 396, 521, 704, 1132, 1327, 1612, 1672
BstKTI GATC 8 cut(s) 36, 280, 461, 517, 895, 1669, 1684, 1936
BstMAI GTCTC 6 cut(s) 137, 615, 971, 1338, 1375, 1595
BstMBI GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
BstMCI CGRYCG 2 cut(s) 1003, 1416
BstMWI GCNNNNNNNGC 6 cut(s) 114, 393, 542, 551, 701, 720
BstNI CCWGG 2 cut(s) 67, 1509
BstNSI RCATGY 3 cut(s) 554, 1709, 1770
BstSCI CCNGG 2 cut(s) 65, 1507
BstSFI CTRYAG 1 cut(s) 1431
BstV1I GCAGC 4 cut(s) 166, 169, 679, 976
BstV2I GAAGAC 1 cut(s) 52
BstX2I RGATCY 4 cut(s) 33, 458, 892, 1666
BstXI CCANNNNNNTGG 1 cut(s) 1701
BstYI RGATCY 4 cut(s) 33, 458, 892, 1666
Bsu36I CCTNAGG 1 cut(s) 591
BsuRI GGCC 4 cut(s) 364, 387, 775, 1565
BtgI CCRYGG 1 cut(s) 1529
BtsCI GGATG 8 cut(s) 337, 396, 521, 704, 1132, 1327, 1612, 1672
BtsI GCAGTG 1 cut(s) 730
BtsIMutI CAGTG 2 cut(s) 141, 730
Cac8I GCNNGC 6 cut(s) 106, 1173, 1469, 1703, 1707, 1851
CciI TCATGA 1 cut(s) 973
Cfr13I GGNCC 2 cut(s) 385, 1241
CseI GACGC 2 cut(s) 59, 597
Csp6I GTAC 3 cut(s) 997, 1356, 1820
CviAII CATG 8 cut(s) 551, 924, 974, 986, 1530, 1706, 1767, 1878
CviQI GTAC 3 cut(s) 997, 1356, 1820
DdeI CTNAG 5 cut(s) 259, 591, 1281, 1478, 1789
DpnI GATC 8 cut(s) 35, 279, 460, 516, 894, 1668, 1683, 1935
DpnII GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
DraI TTTAAA 1 cut(s) 1807
DrdI GACNNNNNNGTC 1 cut(s) 56
DseDI GACNNNNNNGTC 1 cut(s) 56
Eam1104I CTCTTC 2 cut(s) 199, 1839
EarI CTCTTC 2 cut(s) 199, 1839
Ecl136II GAGCTC 1 cut(s) 117
Eco130I CCWWGG 4 cut(s) 7, 1376, 1529, 1722
Eco147I AGGCCT 1 cut(s) 775
Eco24I GRGCYC 3 cut(s) 119, 215, 716
Eco31I GGTCTC 1 cut(s) 137
Eco47I GGWCC 1 cut(s) 1241
Eco53kI GAGCTC 1 cut(s) 117
Eco57I CTGAAG 2 cut(s) 888, 932
Eco81I CCTNAGG 1 cut(s) 591
Eco88I CYCGRG 1 cut(s) 709
EcoICRI GAGCTC 1 cut(s) 117
EcoRI GAATTC 1 cut(s) 957
EcoRII CCWGG 2 cut(s) 65, 1507
EcoT14I CCWWGG 4 cut(s) 7, 1376, 1529, 1722
EcoT22I ATGCAT 1 cut(s) 1711
EcoT38I GRGCYC 3 cut(s) 119, 215, 716
ErhI CCWWGG 4 cut(s) 7, 1376, 1529, 1722
Esp3I CGTCTC 3 cut(s) 615, 1375, 1595
FaeI CATG 8 cut(s) 554, 927, 977, 989, 1533, 1709, 1770, 1881
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 1 cut(s) 1417
FatI CATG 8 cut(s) 550, 923, 973, 985, 1529, 1705, 1766, 1877
FauI CCCGC 3 cut(s) 90, 1460, 1464
FauNDI CATATG 2 cut(s) 311, 439
Fnu4HI GCNGC 6 cut(s) 180, 183, 546, 693, 990, 1313
FokI GGATG 8 cut(s) 344, 383, 508, 691, 1119, 1334, 1619, 1659
FriOI GRGCYC 3 cut(s) 119, 215, 716
Fsp4HI GCNGC 6 cut(s) 180, 183, 546, 693, 990, 1313
FspBI CTAG 5 cut(s) 162, 720, 771, 1557, 1850
GluI GCNGC 6 cut(s) 180, 183, 546, 693, 990, 1313
GsuI CTGGAG 2 cut(s) 49, 1706
HaeIII GGCC 4 cut(s) 364, 387, 775, 1565
HapII CCGG 1 cut(s) 77
HgaI GACGC 2 cut(s) 59, 597
Hin1I GRCGYC 1 cut(s) 51
Hin1II CATG 8 cut(s) 554, 927, 977, 989, 1533, 1709, 1770, 1881
HinfI GANTC 8 cut(s) 167, 263, 635, 1012, 1405, 1572, 1874, 1955
HpaII CCGG 1 cut(s) 77
HphI GGTGA 3 cut(s) 572, 1179, 1304
Hpy166II GTNNAC 4 cut(s) 193, 1820, 1831, 1883
Hpy188III TCNNGA 8 cut(s) 31, 400, 974, 1016, 1035, 1151, 1685, 1920
Hpy8I GTNNAC 4 cut(s) 193, 1820, 1831, 1883
Hpy99I CGWCG 3 cut(s) 53, 59, 581
HpyAV CCTTC 7 cut(s) 320, 427, 912, 942, 1058, 1093, 1903
HpyCH4III ACNGT 5 cut(s) 145, 742, 982, 1360, 1869
HpyCH4IV ACGT 2 cut(s) 235, 579
HpyF10VI GCNNNNNNNGC 6 cut(s) 114, 393, 542, 551, 701, 720
HpyF3I CTNAG 5 cut(s) 259, 591, 1281, 1478, 1789
HpySE526I ACGT 2 cut(s) 235, 579
Hsp92I GRCGYC 1 cut(s) 51
Hsp92II CATG 8 cut(s) 554, 927, 977, 989, 1533, 1709, 1770, 1881
Kzo9I GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
LguI GCTCTTC 1 cut(s) 1839
LmnI GCTCC 4 cut(s) 101, 648, 1690, 1907
Lsp1109I GCAGC 4 cut(s) 166, 169, 679, 976
LweI GCATC 5 cut(s) 27, 405, 713, 742, 778
MaeI CTAG 5 cut(s) 162, 720, 771, 1557, 1850
MaeII ACGT 2 cut(s) 235, 579
MaeIII GTNAC 7 cut(s) 560, 730, 742, 1217, 1325, 1360, 1952
MalI GATC 8 cut(s) 35, 279, 460, 516, 894, 1668, 1683, 1935
MboI GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
MboII GAAGA 9 cut(s) 52, 216, 492, 509, 887, 1465, 1598, 1661, 1856
MfeI CAATTG 3 cut(s) 555, 1265, 1929
MflI RGATCY 4 cut(s) 33, 458, 892, 1666
MhlI GDGCHC 4 cut(s) 119, 215, 716, 1144
MlyI GAGTC 3 cut(s) 1399, 1868, 1949
MmeI TCCRAC 3 cut(s) 601, 1396, 1885
Mph1103I ATGCAT 1 cut(s) 1711
MroXI GAANNNNTTC 1 cut(s) 1423
MseI TTAA 6 cut(s) 867, 1028, 1211, 1646, 1758, 1806
MslI CAYNNNNRTG 1 cut(s) 1137
MspI CCGG 1 cut(s) 77
MspR9I CCNGG 2 cut(s) 67, 1509
MunI CAATTG 3 cut(s) 555, 1265, 1929
Mva1269I GAATGC 1 cut(s) 1438
MvaI CCWGG 2 cut(s) 67, 1509
MwoI GCNNNNNNNGC 6 cut(s) 114, 393, 542, 551, 701, 720
NcoI CCATGG 1 cut(s) 1529
NdeI CATATG 2 cut(s) 311, 439
NdeII GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
NheI GCTAGC 1 cut(s) 1849
NlaIII CATG 8 cut(s) 554, 927, 977, 989, 1533, 1709, 1770, 1881
NlaIV GGNNCC 3 cut(s) 35, 588, 1692
NmeAIII GCCGAG 2 cut(s) 447, 1076
NmuCI GTSAC 5 cut(s) 560, 730, 742, 1360, 1952
NsiI ATGCAT 1 cut(s) 1711
NspI RCATGY 3 cut(s) 554, 1709, 1770
NspV TTCGAA 1 cut(s) 796
PaeI GCATGC 1 cut(s) 1709
PaeR7I CTCGAG 1 cut(s) 709
PagI TCATGA 1 cut(s) 973
PceI AGGCCT 1 cut(s) 775
PciI ACATGT 1 cut(s) 1766
PciSI GCTCTTC 1 cut(s) 1839
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PctI GAATGC 1 cut(s) 1438
PdmI GAANNNNTTC 1 cut(s) 1423
PfeI GAWTC 5 cut(s) 167, 263, 635, 1012, 1572
PflFI GACNNNGTC 1 cut(s) 53
PflMI CCANNNNNTGG 1 cut(s) 620
PfoI TCCNGGA 1 cut(s) 65
PkrI GCNGC 6 cut(s) 181, 184, 547, 694, 991, 1314
PleI GAGTC 3 cut(s) 1399, 1868, 1949
PpsI GAGTC 3 cut(s) 1399, 1868, 1949
Ppu21I YACGTR 1 cut(s) 236
PscI ACATGT 1 cut(s) 1766
PshBI ATTAAT 1 cut(s) 1028
PsiI TTATAA 1 cut(s) 1460
Psp124BI GAGCTC 1 cut(s) 119
Psp6I CCWGG 2 cut(s) 65, 1507
PspGI CCWGG 2 cut(s) 65, 1507
PspN4I GGNNCC 3 cut(s) 35, 588, 1692
PspPI GGNCC 2 cut(s) 385, 1241
PspXI VCTCGAGB 1 cut(s) 709
PsuI RGATCY 4 cut(s) 33, 458, 892, 1666
PsyI GACNNNGTC 1 cut(s) 53
RsaI GTAC 3 cut(s) 998, 1357, 1821
RsaNI GTAC 3 cut(s) 997, 1356, 1820
RseI CAYNNNNRTG 1 cut(s) 1137
SacI GAGCTC 1 cut(s) 119
SapI GCTCTTC 1 cut(s) 1839
SaqAI TTAA 6 cut(s) 867, 1028, 1211, 1646, 1758, 1806
SatI GCNGC 6 cut(s) 180, 183, 546, 693, 990, 1313
Sau3AI GATC 8 cut(s) 33, 277, 458, 514, 892, 1666, 1681, 1933
Sau96I GGNCC 2 cut(s) 385, 1241
SchI GAGTC 3 cut(s) 1399, 1868, 1949
ScrFI CCNGG 2 cut(s) 67, 1509
SduI GDGCHC 4 cut(s) 119, 215, 716, 1144
SfaNI GCATC 5 cut(s) 27, 405, 713, 742, 778
SfcI CTRYAG 1 cut(s) 1431
Sfr274I CTCGAG 1 cut(s) 709
SfuI TTCGAA 1 cut(s) 796
SinI GGWCC 1 cut(s) 1241
SlaI CTCGAG 1 cut(s) 709
SmiMI CAYNNNNRTG 1 cut(s) 1137
SmlI CTYRAG 3 cut(s) 673, 709, 1143
SmoI CTYRAG 3 cut(s) 673, 709, 1143
SphI GCATGC 1 cut(s) 1709
SseBI AGGCCT 1 cut(s) 775
SsiI CCGC 7 cut(s) 91, 97, 129, 545, 1312, 1467, 1471
SspI AATATT 1 cut(s) 1545
SspMI CTAG 5 cut(s) 162, 720, 771, 1557, 1850
SstI GAGCTC 1 cut(s) 119
StuI AGGCCT 1 cut(s) 775
StyD4I CCNGG 2 cut(s) 65, 1507
StyI CCWWGG 4 cut(s) 7, 1376, 1529, 1722
TaaI ACNGT 5 cut(s) 145, 742, 982, 1360, 1869
TaiI ACGT 2 cut(s) 238, 582
TaqI TCGA 6 cut(s) 48, 513, 662, 710, 796, 1494
TaqII GACCGA 2 cut(s) 1017, 1402
TatI WGTACW 2 cut(s) 1355, 1819
TauI GCSGC 2 cut(s) 548, 1315
TfiI GAWTC 5 cut(s) 167, 263, 635, 1012, 1572
Tru1I TTAA 6 cut(s) 867, 1028, 1211, 1646, 1758, 1806
Tru9I TTAA 6 cut(s) 867, 1028, 1211, 1646, 1758, 1806
TscAI CASTG 2 cut(s) 148, 730
TseFI GTSAC 5 cut(s) 560, 730, 742, 1360, 1952
TseI GCWGC 4 cut(s) 179, 182, 692, 989
Tsp45I GTSAC 5 cut(s) 560, 730, 742, 1360, 1952
TspDTI ATGAA 8 cut(s) 793, 962, 1121, 1599, 1661, 1788, 1828, 1902
TspGWI ACGGA 2 cut(s) 1542, 1619
TspRI CASTG 2 cut(s) 148, 730
Tth111I GACNNNGTC 1 cut(s) 53
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 1 cut(s) 1241
VspI ATTAAT 1 cut(s) 1028
XapI RAATTY 4 cut(s) 303, 957, 1754, 1835
XceI RCATGY 3 cut(s) 554, 1709, 1770
XcmI CCANNNNNNNNNTGG 1 cut(s) 1229
XhoI CTCGAG 1 cut(s) 709
XmnI GAANNNNTTC 1 cut(s) 1423
XspI CTAG 5 cut(s) 162, 720, 771, 1557, 1850
Zsp2I ATGCAT 1 cut(s) 1711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.