Rorug04G0159300

Belongs to the adaptor complexes medium subunit family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
27783583 .. 27788407
4825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0159300.1

Sequence Viewer

Length: 2772 bp
ATGGCTGAGGCTGTTGTTTCCATTGTGGTGGGAAGGCTCGCAGACTTTATCATTCAGGAAGCGAACCACTTCTGTAGAGTTAGGGATCAGGTTGAGCTTGCACAAACAGAGCTTCAAATGATGCAAGGCTTCTTGAAAGATGCAGATAAAAGGCAACAAGACGATGAAACAGTGCGCATTTGGGTTGCCAAAGTTAGGGATGCTGCTTATGATATGGAGGATGCTATCGAAACTTTTTCCTTCAAAGTCTCTTCCAAGACGAGAAGGCTTGCTTGTATCTTGATTAAAGGAAAGGGAGTTCACAAGATCGTTGCAGAAATTGAGAAAATCACTACCAAAATCTCTAGCTTGAGGTTGAGTTTGCAGACCTACAACATCAGAGAAATAAGGGAGAGTAGAGATGGTGCAACCTCTTCGTATCAGAGGCAGCAACAACTGAGGCGAACTTACTCTCACATTATTGAACGTGATGTTGTTGGATTACAAGACAACATAAAGGAATTGGTTATTCATCTGGTGAAGGATGAGAATTGCCACAAAGTTGTTTCTATCTGGGGCATGGGTGGTTTGGGAAAGACCACTCTTGCAAAGCAGGTTTATTATCAGAGTGAAGTTAGGCGCCATTTTAGTTGTTTTGCTTGGGTGTGTATATCTCACAGATTCCAAGTAAGGGAAGTCTGGGAAGGAATTTTGATTAAACTCATTTCTGCCACCAATGAGCAACGAGAAGAAATTGCGAGAATGAGGGAGGATGAAATTGCCAAAAAGCTTTATCTTATTCTACAAGAAAGGACATGTTTGGTGGTTCTTGATGACATCTGGAGTATAGAGACATGGGACTCTTTGAAAGCTGGATTTCCACATGAGAAAACTATGAGCAAAATATTACTCACTACGCGCAACAAAGCGGTAGCTCTGCACGCAGATAGAAAAGGGTTTCTTCACCAACCTCGGCCACTAAATGACTCTGAAAGTTGGCAATTGTTTGAGATCATAGCTATTTTTGGAAGGGAGGAAACAAATCCTGAAATCCACTCAAAGATGAAAGAGTTGGGAAAGAAGATGCTTCTGCATTGTGCAGGTTTGCCATTAGCCATCAGTGCACTTGCCGGACTTCTAGCTAGAAAGGACACAATTGATGAGTGGAATACAGTGCATAAGAATGTTTTTGCATACATAAGAAGAGGAAAAGGCCATGAACAAGAATATGCAGGTGCATCATGGGTTTTGGCATTGAGTTATGATGACTTGCCATACCATTTAAAACCATGCTTTCTATATTTAGGTCACTTTCCTGAGGATTTTGAAATACCAGTGAAACTATTGACTCAATTATGGATGGCAGAAGGTCTAATATCTTTGGGGCAACAAGGACAGAGTTTCATTGGATCATTGGAAGACATAGGGTACAGCTACTTGAGTGAGTTAGTGGAAAGATGTGTGGTTCAAATTGGAGAAAGGGGTTCAATTAGAAAGATTAAAACTTGCCGCATCCATGACCTTATGAGAGACTTGTGCTTGTTAAAGACAGAAGAGGAGAACTTCCTTCAAATTGTCAACTTTTCGCATAAAAAAGAGGCAATGTATCCTTCTGCTTCTTCTACAGTAAGTATCAGTAAAGTTCGAAGACTTGCAATCCATTTGGATGATAAGGCTGACAGATTGGTTCCCCCTAGAGATGAAAGAAATGGCCACCTCAGGTCCTTGTTATACTTTACCCCAAGAAACTGGATGCCACGAAATCAAAGATTGGTACAATCAGTTTTTAAGGTCTTCAAATTGCTTAGAGTTTTGAGGTTTGAAAATATGAGTACAGAAGTAGAGTTGCCAAGTGACATTGGGAATATGGTTCATCTCAGGTTCCTGAGCCTAAGGCGTTGTCATATAAAACGGTTGCCATTGTCCATAGGGAATTTGAAGAGCATGCAAACTCTAGATCTTAGATTTCGTCAATTAGATATTGTTCCAAATGTGCTATGGAAGATGGAACAACTGAGACACTTGTATTTACCCCTGTACTACCGTGCAAGTGGTAAACTGCGGCTTGATACTCTTCACTATTTGCAGACCTTACTGCATGTTGACAATTCTCACTTGAATGATATTACTGAACTAACCAATCTTAAAAAATTGGCTGTGCAAGTGTCGAGCCCCTTGAAGAATCTGGAGAAGGTATTAACATCTACAAGCAGCACACTTGAGCGCATCAGGTCTCTATATGTGCACAACTTAGTTGGAATTCATAGTTGTGCAGAGGTTTCACAAATAGTTTCAAAATGTCACAACATATACAAGCTTGATTTGAATGGTCCAACTGTAGAGTTACCAAAAGACCTTCAGGGCTATCCAAATCTCACCAAGTTGTGGTTGTGTCGTTGCTTTCTAAAGGAGAATCAAATGTCAGTACTAGAGAAGCTGCCAAACTTAAGAAATCTTTATCTCCAATCCGGTACGTTTGAGGACAATGTCAAGACACTAGTGTTCTCCAAAGGAGGCTTTCTTCGTCTTGAATTTCTCTCCCTGAGCTACATGGACGAAATAGATGGGTGGACTGTGGAGGAAGGAGCCATGCCTAGTCTCTGCCAATTGCACATTTCGCGGTGTAGAGGATTGACCACATTTCCGGATGGCTTGAGATACAACAGCAGCCTCAAGAAGTTGAGCATTACGCGGATGCCTAGGACCTTCTATAGTAAGCTTCAGGAAGGAGGAGAGGATTTCTATAAAATCCAACATGTGTCTTCGCTTGTATTTGGAGAGGCGTGCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

923

Amino Acids

106.66

Weight (kDa)

8.94

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 1.6e-26 Rx N-terminal domain
NB-ARC PF00931 162 - 333 7.9e-41 NB-ARC domain
WHD_DRP PF23559 431 - 506 3.3e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 587 - 872 3.1e-36 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000298)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29150 FvH4_1g29150 FvH4_2g35201 FvH4_3g36371 FvH4_4g12590 FvH4_4g12590 FvH4_4g13903 FvH4_4g16630 FvH4_4g16630 FvH4_4g16640 FvH4_4g16640 FvH4_4g16640
malus_domestica MD03G1174100.v1.1 MD13G1177900.v1.1 MD13G1178000.v1.1 MD13G1178100.v1.1
prunus_persica Prupe.1G146800_v2.0.a1 Prupe.1G146900_v2.0.a1 Prupe.1G147000_v2.0.a1 Prupe.1G147100_v2.0.a1 Prupe.1G147200_v2.0.a1 Prupe.1G185600_v2.0.a1 Prupe.1G529300_v2.0.a1 Prupe.6G154200_v2.0.a1 Prupe.6G217100_v2.0.a1
pyrus_communis pycom03g13170 pycom03g13180 pycom05g29500 pycom13g15350 pycom13g15380 pycom13g15390 pycom13g15400
rosa_chinensis RchiOBHm_Chr4g0395601 RchiOBHm_Chr4g0395611 RchiOBHm_Chr4g0395621 RchiOBHm_Chr4g0413281 RchiOBHm_Chr4g0419621 RchiOBHm_Chr4g0419631 RchiOBHm_Chr4g0419901 RchiOBHm_Chr4g0419911 RchiOBHm_Chr4g0419981 RchiOBHm_Chr4g0420081 RchiOBHm_Chr4g0420091 RchiOBHm_Chr6g0306731
rosa_laevigata RLG00000006686 RLG00000007789 RLG00000007793 RLG00000007794 RLG00000007808 RLG00000007809 RLG00000011318
rosa_multiflora Rmu_co8471007.1_g000001 Rmu_sc0000717.1_g000001 Rmu_sc0003141.1_g000001 Rmu_sc0006133.1_g000013 Rmu_sc0013209.1_g000001 Rmu_sc0013209.1_g000002 Rmu_sc0017785.1_g000004 Rmu_sc0017786.1_g000003 Rmu_sc0023895.1_g000004 Rmu_sc0032897.1_g000004
rosa_roxburghii Rroxscaffold_5G00339000 Rroxscaffold_5G00357390 Rroxscaffold_5G00362460 Rroxscaffold_5G00362470 Rroxscaffold_5G00362730 Rroxscaffold_5G00362740 Rroxscaffold_5G00362800
rosa_rugosa Rorug04G0158700 Rorug04G0158800 Rorug04G0158800 Rorug04G0158900 Rorug04G0159000 Rorug04G0159100 Rorug04G0159200 Rorug04G0159300 Rorug04G0161200 Rorug04G0161300 Rorug04G0161300 Rorug04G0161400 Rorug04G0162000 Rorug04G0162100
rosa_samantha Rh1BG049900 Rh4AG179100 Rh4AG179200 Rh4AG220700 Rh4AG222300 Rh4AG222400 Rh4AG222700 Rh4AG222900 Rh4BG222400 Rh4BG222600 Rh4BG224700 Rh4BG224800 Rh4BG225300 Rh4BG225400 Rh4BG338700 Rh4BG338800 Rh4CG235500 Rh4DG174300 Rh4DG219400 Rh4DG219600 Rh4DG221300 Rh4DG221400 Rh4DG221700 Rh5CG465500 Rh5DG455700 Rh6BG417700 Rh6BG436500 Rh6BG436600 Rh6CG478500 Rh6CG478600 Rh6DG465600 Rh6DG465700 Rh6DG492000
rosa_wichuraiana Rw4G018980 Rw4G019160 Rw4G019170 Rw4G019190 Rw4G028680 Rw5G040160 Rw6G040460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1202
Acc16I TGCGCA 1 cut(s) 176
Acc36I ACCTGC 3 cut(s) 583, 1070, 1202
AccB1I GGYRCC 1 cut(s) 618
AccB7I CCANNNNNTGG 1 cut(s) 2364
AccII CGCG 3 cut(s) 898, 2599, 2671
AccIII TCCGGA 1 cut(s) 2623
AciI CCGC 5 cut(s) 908, 1489, 2041, 2599, 2671
AclWI GGATC 2 cut(s) 93, 1396
AcoI YGGCCR 2 cut(s) 953, 1690
AcsI RAATTY 4 cut(s) 687, 1912, 2238, 2510
AcuI CTGAAG 2 cut(s) 2321, 2684
AcyI GRCGYC 1 cut(s) 619
AfaI GTAC 6 cut(s) 1409, 1755, 1813, 2018, 2406, 2452
AfiI CCNNNNNNNGG 3 cut(s) 195, 670, 2364
AflII CTTAAG 1 cut(s) 2425
AflIII ACRYGT 2 cut(s) 794, 2734
AhlI ACTAGT 1 cut(s) 2476
AloI GAACNNNNNNTCC 2 cut(s) 282, 314
Alw21I GWGCWC 2 cut(s) 1105, 2226
Alw26I GTCTC 6 cut(s) 253, 824, 1503, 1990, 2217, 2582
Alw44I GTGCAC 2 cut(s) 1101, 2222
AlwI GGATC 2 cut(s) 93, 1396
Aor13HI TCCGGA 1 cut(s) 2623
AoxI GGCC 3 cut(s) 953, 1192, 1690
ApaLI GTGCAC 2 cut(s) 1101, 2222
ApeKI GCWGC 5 cut(s) 203, 427, 2190, 2416, 2646
ApoI RAATTY 4 cut(s) 687, 1912, 2238, 2510
Asp700I GAANNNNTTC 1 cut(s) 68
AspA2I CCTAGG 1 cut(s) 2678
AspLEI GCGC 4 cut(s) 177, 621, 900, 2205
AspS9I GGNCC 3 cut(s) 1701, 2309, 2682
AsuHPI GGTGA 3 cut(s) 529, 935, 2347
AsuII TTCGAA 1 cut(s) 1624
AvaII GGWCC 3 cut(s) 1701, 2309, 2682
AvrII CCTAGG 1 cut(s) 2678
AxyI CCTNAGG 3 cut(s) 1296, 1697, 1871
BaeGI GKGCMC 2 cut(s) 1105, 2226
BalI TGGCCA 1 cut(s) 1692
BanI GGYRCC 1 cut(s) 618
BanII GRGCYC 1 cut(s) 2153
BbsI GAAGAC 4 cut(s) 1404, 1633, 1765, 2733
Bbv12I GWGCWC 2 cut(s) 1105, 2226
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 5 cut(s) 190, 439, 2202, 2403, 2658
BccI CCATC 6 cut(s) 395, 1103, 1333, 1978, 2537, 2621
BcgI CGANNNNNNTGC 2 cut(s) 396, 430
BciVI GTATCC 1 cut(s) 1596
BcoDI GTCTC 6 cut(s) 253, 824, 1503, 1990, 2217, 2582
BcuI ACTAGT 1 cut(s) 2476
BfmI CTRYAG 4 cut(s) 73, 1602, 2316, 2689
BfoI RGCGCY 1 cut(s) 622
BfrI CTTAAG 1 cut(s) 2425
BfuAI ACCTGC 3 cut(s) 583, 1070, 1202
BfuI GTATCC 1 cut(s) 1596
BglII AGATCT 1 cut(s) 1936
BisI GCNGC 7 cut(s) 204, 428, 1489, 2042, 2191, 2417, 2647
BlnI CCTAGG 1 cut(s) 2678
BlsI GCNGC 7 cut(s) 205, 429, 1490, 2043, 2192, 2418, 2648
BmcAI AGTACT 1 cut(s) 2406
Bme18I GGWCC 3 cut(s) 1701, 2309, 2682
BmgT120I GGNCC 3 cut(s) 1701, 2309, 2682
BmiI GGNNCC 4 cut(s) 620, 1668, 1862, 2566
BpiI GAAGAC 4 cut(s) 1404, 1633, 1765, 2733
BpmI CTGGAG 2 cut(s) 841, 2186
Bpu10I CCTNAGC 3 cut(s) 6, 1865, 2522
Bpu14I TTCGAA 1 cut(s) 1624
BpuEI CTTGAG 5 cut(s) 370, 1438, 2219, 2636, 2653
BsaHI GRCGYC 1 cut(s) 619
BsaI GGTCTC 1 cut(s) 2217
BsaJI CCNNGG 2 cut(s) 950, 2678
BsaWI WCCGGW 2 cut(s) 2447, 2623
Bsc4I CCNNNNNNNGG 3 cut(s) 195, 670, 2364
Bse1I ACTGG 2 cut(s) 1313, 1733
Bse21I CCTNAGG 3 cut(s) 1296, 1697, 1871
Bse3DI GCAATG 1 cut(s) 1587
BseAI TCCGGA 1 cut(s) 2623
BseDI CCNNGG 2 cut(s) 950, 2678
BseLI CCNNNNNNNGG 3 cut(s) 195, 670, 2364
BseMI GCAATG 1 cut(s) 1587
BseMII CTCAG 7 cut(s) 428, 1287, 1711, 1856, 1870, 1985, 2513
BseNI ACTGG 2 cut(s) 1313, 1733
BseRI GAGGAG 2 cut(s) 1550, 2724
BseSI GKGCMC 2 cut(s) 1105, 2226
BseXI GCAGC 5 cut(s) 190, 439, 2202, 2403, 2658
BsgI GTGCAG 3 cut(s) 902, 1098, 2271
Bsh1236I CGCG 3 cut(s) 898, 2599, 2671
BshFI GGCC 3 cut(s) 955, 1194, 1692
BshNI GGYRCC 1 cut(s) 618
BsiHKAI GWGCWC 2 cut(s) 1105, 2226
BsiSI CCGG 3 cut(s) 1110, 2448, 2624
BslFI GGGAC 1 cut(s) 851
BslI CCNNNNNNNGG 3 cut(s) 195, 670, 2364
BsmAI GTCTC 6 cut(s) 253, 824, 1503, 1990, 2217, 2582
BsmFI GGGAC 1 cut(s) 851
BsnI GGCC 3 cut(s) 955, 1194, 1692
Bso31I GGTCTC 1 cut(s) 2217
Bsp119I TTCGAA 1 cut(s) 1624
Bsp1286I GDGCHC 3 cut(s) 1105, 2153, 2226
Bsp13I TCCGGA 1 cut(s) 2623
Bsp143I GATC 5 cut(s) 85, 306, 990, 1388, 1936
BspACI CCGC 5 cut(s) 908, 1489, 2041, 2599, 2671
BspANI GGCC 3 cut(s) 955, 1194, 1692
BspCNI CTCAG 7 cut(s) 429, 1288, 1710, 1857, 1869, 1986, 2514
BspEI TCCGGA 1 cut(s) 2623
BspFNI CGCG 3 cut(s) 898, 2599, 2671
BspLI GGNNCC 4 cut(s) 620, 1668, 1862, 2566
BspMI ACCTGC 3 cut(s) 583, 1070, 1202
BspPI GGATC 2 cut(s) 93, 1396
BspQI GCTCTTC 1 cut(s) 1913
BspT104I TTCGAA 1 cut(s) 1624
BspT107I GGYRCC 1 cut(s) 618
BspTI CTTAAG 1 cut(s) 2425
BspTNI GGTCTC 1 cut(s) 2217
BsrDI GCAATG 1 cut(s) 1587
BsrI ACTGG 2 cut(s) 1313, 1733
BssECI CCNNGG 2 cut(s) 950, 2678
BssMI GATC 5 cut(s) 85, 306, 990, 1388, 1936
BssNI GRCGYC 1 cut(s) 619
BssT1I CCWWGG 1 cut(s) 2678
Bst4CI ACNGT 7 cut(s) 172, 1153, 1606, 1893, 2024, 2317, 2554
Bst6I CTCTTC 6 cut(s) 256, 418, 1177, 1527, 1913, 2058
BstACI GRCGYC 1 cut(s) 619
BstAFI CTTAAG 1 cut(s) 2425
BstBI TTCGAA 1 cut(s) 1624
BstC8I GCNNGC 6 cut(s) 39, 99, 270, 921, 1925, 2764
BstFNI CGCG 3 cut(s) 898, 2599, 2671
BstH2I RGCGCY 1 cut(s) 622
BstHHI GCGC 4 cut(s) 177, 621, 900, 2205
BstKTI GATC 5 cut(s) 88, 309, 993, 1391, 1939
BstMAI GTCTC 6 cut(s) 253, 824, 1503, 1990, 2217, 2582
BstMBI GATC 5 cut(s) 85, 306, 990, 1388, 1936
BstMWI GCNNNNNNNGC 3 cut(s) 920, 1100, 2596
BstNSI RCATGY 4 cut(s) 798, 1927, 2081, 2738
BstSFI CTRYAG 4 cut(s) 73, 1602, 2316, 2689
BstSLI GKGCMC 2 cut(s) 1105, 2226
BstUI CGCG 3 cut(s) 898, 2599, 2671
BstV1I GCAGC 5 cut(s) 190, 439, 2202, 2403, 2658
BstV2I GAAGAC 4 cut(s) 1404, 1633, 1765, 2733
BstX2I RGATCY 1 cut(s) 1936
BstXI CCANNNNNNTGG 2 cut(s) 28, 1728
BstYI RGATCY 1 cut(s) 1936
Bsu36I CCTNAGG 3 cut(s) 1296, 1697, 1871
BsuI GTATCC 1 cut(s) 1596
BsuRI GGCC 3 cut(s) 955, 1194, 1692
BtsIMutI CAGTG 4 cut(s) 177, 1105, 1158, 1320
BveI ACCTGC 3 cut(s) 583, 1070, 1202
Cac8I GCNNGC 6 cut(s) 39, 99, 270, 921, 1925, 2764
CfoI GCGC 4 cut(s) 177, 621, 900, 2205
Cfr13I GGNCC 3 cut(s) 1701, 2309, 2682
Csp6I GTAC 6 cut(s) 1408, 1754, 1812, 2017, 2405, 2451
CviQI GTAC 6 cut(s) 1408, 1754, 1812, 2017, 2405, 2451
DinI GGCGCC 1 cut(s) 620
DpnI GATC 5 cut(s) 87, 308, 992, 1390, 1938
DpnII GATC 5 cut(s) 85, 306, 990, 1388, 1936
DraI TTTAAA 1 cut(s) 1263
EaeI YGGCCR 2 cut(s) 953, 1690
Eam1104I CTCTTC 6 cut(s) 256, 418, 1177, 1527, 1913, 2058
EarI CTCTTC 6 cut(s) 256, 418, 1177, 1527, 1913, 2058
Eco130I CCWWGG 1 cut(s) 2678
Eco24I GRGCYC 1 cut(s) 2153
Eco31I GGTCTC 1 cut(s) 2217
Eco47I GGWCC 3 cut(s) 1701, 2309, 2682
Eco57I CTGAAG 2 cut(s) 2321, 2684
Eco81I CCTNAGG 3 cut(s) 1296, 1697, 1871
EcoO109I RGGNCCY 2 cut(s) 1701, 2682
EcoRI GAATTC 1 cut(s) 2238
EcoT14I CCWWGG 1 cut(s) 2678
EcoT38I GRGCYC 1 cut(s) 2153
EgeI GGCGCC 1 cut(s) 620
EheI GGCGCC 1 cut(s) 620
ErhI CCWWGG 1 cut(s) 2678
FalI AAGNNNNNCTT 4 cut(s) 256, 288, 924, 956
FaqI GGGAC 1 cut(s) 851
Fnu4HI GCNGC 7 cut(s) 204, 428, 1489, 2042, 2191, 2417, 2647
FriOI GRGCYC 1 cut(s) 2153
Fsp4HI GCNGC 7 cut(s) 204, 428, 1489, 2042, 2191, 2417, 2647
FspAI RTGCGCAY 1 cut(s) 176
FspI TGCGCA 1 cut(s) 176
GlaI GCGC 4 cut(s) 176, 620, 899, 2204
GluI GCNGC 7 cut(s) 204, 428, 1489, 2042, 2191, 2417, 2647
GsuI CTGGAG 2 cut(s) 841, 2186
HaeII RGCGCY 1 cut(s) 622
HaeIII GGCC 3 cut(s) 955, 1194, 1692
HapII CCGG 3 cut(s) 1110, 2448, 2624
HhaI GCGC 4 cut(s) 177, 621, 900, 2205
Hin1I GRCGYC 1 cut(s) 619
Hin6I GCGC 4 cut(s) 175, 619, 898, 2203
HinP1I GCGC 4 cut(s) 175, 619, 898, 2203
HincII GTYRAC 2 cut(s) 1558, 2083
HindII GTYRAC 2 cut(s) 1558, 2083
HindIII AAGCTT 3 cut(s) 767, 2294, 2696
HinfI GANTC 6 cut(s) 660, 839, 965, 1327, 2161, 2392
HpaII CCGG 3 cut(s) 1110, 2448, 2624
HphI GGTGA 3 cut(s) 529, 935, 2347
Hpy166II GTNNAC 7 cut(s) 301, 1103, 1558, 2036, 2083, 2224, 2550
Hpy188I TCNGA 4 cut(s) 380, 423, 606, 970
Hpy8I GTNNAC 7 cut(s) 301, 1103, 1558, 2036, 2083, 2224, 2550
HpyCH4III ACNGT 7 cut(s) 172, 1153, 1606, 1893, 2024, 2317, 2554
HpyCH4IV ACGT 2 cut(s) 466, 2453
HpyF10VI GCNNNNNNNGC 3 cut(s) 920, 1100, 2596
HpySE526I ACGT 2 cut(s) 466, 2453
Hsp92I GRCGYC 1 cut(s) 619
HspAI GCGC 4 cut(s) 175, 619, 898, 2203
KasI GGCGCC 1 cut(s) 618
Kpn2I TCCGGA 1 cut(s) 2623
Kzo9I GATC 5 cut(s) 85, 306, 990, 1388, 1936
LguI GCTCTTC 1 cut(s) 1913
LmnI GCTCC 1 cut(s) 2564
Lsp1109I GCAGC 5 cut(s) 190, 439, 2202, 2403, 2658
MaeII ACGT 2 cut(s) 466, 2453
MaeIII GTNAC 4 cut(s) 1286, 1832, 2279, 2322
MalI GATC 5 cut(s) 87, 308, 992, 1390, 1938
MboI GATC 5 cut(s) 85, 306, 990, 1388, 1936
MfeI CAATTG 3 cut(s) 980, 1134, 2585
MflI RGATCY 1 cut(s) 1936
MhlI GDGCHC 3 cut(s) 1105, 2153, 2226
MlsI TGGCCA 1 cut(s) 1692
MluNI TGGCCA 1 cut(s) 1692
Mly113I GGCGCC 1 cut(s) 619
MlyI GAGTC 3 cut(s) 833, 959, 1321
MmeI TCCRAC 4 cut(s) 457, 2215, 2336, 2755
Mox20I TGGCCA 1 cut(s) 1692
MroI TCCGGA 1 cut(s) 2623
MroXI GAANNNNTTC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 1692
MseI TTAA 9 cut(s) 285, 696, 1262, 1479, 1523, 1767, 2124, 2177, 2426
MslI CAYNNNNRTG 5 cut(s) 26, 1161, 1644, 2097, 2247
Msp20I TGGCCA 1 cut(s) 1692
MspCI CTTAAG 1 cut(s) 2425
MspI CCGG 3 cut(s) 1110, 2448, 2624
MunI CAATTG 3 cut(s) 980, 1134, 2585
MvnI CGCG 3 cut(s) 898, 2599, 2671
MwoI GCNNNNNNNGC 3 cut(s) 920, 1100, 2596
NarI GGCGCC 1 cut(s) 619
NdeII GATC 5 cut(s) 85, 306, 990, 1388, 1936
NlaIV GGNNCC 4 cut(s) 620, 1668, 1862, 2566
NmeAIII GCCGAG 1 cut(s) 931
NmuCI GTSAC 3 cut(s) 1286, 1832, 2279
NsbI TGCGCA 1 cut(s) 176
NspI RCATGY 4 cut(s) 798, 1927, 2081, 2738
NspV TTCGAA 1 cut(s) 1624
PaeI GCATGC 1 cut(s) 1927
PaqCI CACCTGC 1 cut(s) 1202
PciI ACATGT 2 cut(s) 794, 2734
PciSI GCTCTTC 1 cut(s) 1913
PdmI GAANNNNTTC 1 cut(s) 68
PfeI GAWTC 3 cut(s) 660, 2161, 2392
PflFI GACNNNGTC 1 cut(s) 2465
PflMI CCANNNNNTGG 1 cut(s) 2364
PkrI GCNGC 7 cut(s) 205, 429, 1490, 2043, 2192, 2418, 2648
PleI GAGTC 3 cut(s) 833, 959, 1321
PluTI GGCGCC 1 cut(s) 622
PpsI GAGTC 3 cut(s) 833, 959, 1321
PpuMI RGGWCCY 2 cut(s) 1701, 2682
PscI ACATGT 2 cut(s) 794, 2734
Psp5II RGGWCCY 2 cut(s) 1701, 2682
PspN4I GGNNCC 4 cut(s) 620, 1668, 1862, 2566
PspPI GGNCC 3 cut(s) 1701, 2309, 2682
PspPPI RGGWCCY 2 cut(s) 1701, 2682
PsuI RGATCY 1 cut(s) 1936
PsyI GACNNNGTC 1 cut(s) 2465
RsaI GTAC 6 cut(s) 1409, 1755, 1813, 2018, 2406, 2452
RsaNI GTAC 6 cut(s) 1408, 1754, 1812, 2017, 2405, 2451
RseI CAYNNNNRTG 5 cut(s) 26, 1161, 1644, 2097, 2247
SapI GCTCTTC 1 cut(s) 1913
SaqAI TTAA 9 cut(s) 285, 696, 1262, 1479, 1523, 1767, 2124, 2177, 2426
SatI GCNGC 7 cut(s) 204, 428, 1489, 2042, 2191, 2417, 2647
Sau3AI GATC 5 cut(s) 85, 306, 990, 1388, 1936
Sau96I GGNCC 3 cut(s) 1701, 2309, 2682
ScaI AGTACT 1 cut(s) 2406
SchI GAGTC 3 cut(s) 833, 959, 1321
SduI GDGCHC 3 cut(s) 1105, 2153, 2226
SfcI CTRYAG 4 cut(s) 73, 1602, 2316, 2689
SfoI GGCGCC 1 cut(s) 620
SfuI TTCGAA 1 cut(s) 1624
SinI GGWCC 3 cut(s) 1701, 2309, 2682
SmiMI CAYNNNNRTG 5 cut(s) 26, 1161, 1644, 2097, 2247
SmlI CTYRAG 6 cut(s) 349, 1417, 2198, 2425, 2632, 2651
SmoI CTYRAG 6 cut(s) 349, 1417, 2198, 2425, 2632, 2651
SpeI ACTAGT 1 cut(s) 2476
SphI GCATGC 1 cut(s) 1927
SsiI CCGC 5 cut(s) 908, 1489, 2041, 2599, 2671
SspDI GGCGCC 1 cut(s) 618
SspI AATATT 1 cut(s) 885
StyI CCWWGG 1 cut(s) 2678
TaaI ACNGT 7 cut(s) 172, 1153, 1606, 1893, 2024, 2317, 2554
TaiI ACGT 2 cut(s) 469, 2456
TaqI TCGA 3 cut(s) 228, 1624, 2147
TatI WGTACW 3 cut(s) 1811, 2016, 2404
TauI GCSGC 2 cut(s) 1491, 2044
TfiI GAWTC 3 cut(s) 660, 2161, 2392
Tru1I TTAA 9 cut(s) 285, 696, 1262, 1479, 1523, 1767, 2124, 2177, 2426
Tru9I TTAA 9 cut(s) 285, 696, 1262, 1479, 1523, 1767, 2124, 2177, 2426
TscAI CASTG 4 cut(s) 177, 1105, 1158, 1320
TseFI GTSAC 3 cut(s) 1286, 1832, 2279
TseI GCWGC 5 cut(s) 203, 427, 2190, 2416, 2646
Tsp45I GTSAC 3 cut(s) 1286, 1832, 2279
TspDTI ATGAA 9 cut(s) 180, 500, 768, 1058, 1212, 1372, 1695, 1841, 2231
TspRI CASTG 4 cut(s) 177, 1105, 1158, 1320
Tth111I GACNNNGTC 1 cut(s) 2465
Van91I CCANNNNNTGG 1 cut(s) 2364
Vha464I CTTAAG 1 cut(s) 2425
VneI GTGCAC 2 cut(s) 1101, 2222
VpaK11BI GGWCC 3 cut(s) 1701, 2309, 2682
XapI RAATTY 4 cut(s) 687, 1912, 2238, 2510
XbaI TCTAGA 1 cut(s) 1933
XceI RCATGY 4 cut(s) 798, 1927, 2081, 2738
XcmI CCANNNNNNNNNTGG 1 cut(s) 1974
XmaJI CCTAGG 1 cut(s) 2678
XmnI GAANNNNTTC 1 cut(s) 68
ZrmI AGTACT 1 cut(s) 2406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.