F-box-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 789, 1035 |
| Acc36I | ACCTGC | 1 cut(s) | 1285 |
| AccB1I | GGYRCC | 1 cut(s) | 413 |
| AciI | CCGC | 1 cut(s) | 339 |
| AcsI | RAATTY | 5 cut(s) | 364, 497, 857, 909, 1178 |
| AcuI | CTGAAG | 2 cut(s) | 369, 1277 |
| AdeI | CACNNNGTG | 1 cut(s) | 961 |
| AfaI | GTAC | 5 cut(s) | 289, 449, 526, 536, 589 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 440, 761, 1024, 1283 |
| AflIII | ACRYGT | 1 cut(s) | 864 |
| AjiI | CACGTC | 1 cut(s) | 865 |
| AjnI | CCWGG | 1 cut(s) | 14 |
| AleI | CACNNNNGTG | 1 cut(s) | 42 |
| AluBI | AGCT | 5 cut(s) | 74, 176, 665, 1206, 1235 |
| AluI | AGCT | 5 cut(s) | 74, 176, 665, 1206, 1235 |
| Alw21I | GWGCWC | 1 cut(s) | 667 |
| Alw26I | GTCTC | 6 cut(s) | 573, 719, 827, 1060, 1089, 1161 |
| Ama87I | CYCGRG | 1 cut(s) | 1267 |
| AoxI | GGCC | 3 cut(s) | 398, 949, 1270 |
| ApeKI | GCWGC | 2 cut(s) | 341, 555 |
| ApoI | RAATTY | 5 cut(s) | 364, 497, 857, 909, 1178 |
| AseI | ATTAAT | 1 cut(s) | 80 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 735 |
| AspS9I | GGNCC | 4 cut(s) | 219, 398, 1015, 1270 |
| AsuC2I | CCSGG | 1 cut(s) | 1019 |
| AsuHPI | GGTGA | 4 cut(s) | 189, 575, 1174, 1298 |
| AvaI | CYCGRG | 1 cut(s) | 1267 |
| AvaII | GGWCC | 2 cut(s) | 219, 1015 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 579, 612 |
| BanI | GGYRCC | 1 cut(s) | 413 |
| BanII | GRGCYC | 2 cut(s) | 619, 667 |
| Bbv12I | GWGCWC | 1 cut(s) | 667 |
| BbvI | GCAGC | 2 cut(s) | 328, 542 |
| BccI | CCATC | 4 cut(s) | 113, 404, 686, 1283 |
| BciT130I | CCWGG | 1 cut(s) | 16 |
| BciVI | GTATCC | 1 cut(s) | 942 |
| BclI | TGATCA | 2 cut(s) | 213, 1237 |
| BcnI | CCSGG | 1 cut(s) | 1019 |
| BcoDI | GTCTC | 6 cut(s) | 573, 719, 827, 1060, 1089, 1161 |
| BfaI | CTAG | 1 cut(s) | 621 |
| BfmI | CTRYAG | 1 cut(s) | 1207 |
| BfuAI | ACCTGC | 1 cut(s) | 1285 |
| BfuI | GTATCC | 1 cut(s) | 942 |
| BisI | GCNGC | 2 cut(s) | 342, 556 |
| BlsI | GCNGC | 2 cut(s) | 343, 557 |
| Bme1390I | CCNGG | 2 cut(s) | 16, 1019 |
| Bme18I | GGWCC | 2 cut(s) | 219, 1015 |
| BmeT110I | CYCGRG | 1 cut(s) | 1267 |
| BmgBI | CACGTC | 1 cut(s) | 865 |
| BmgT120I | GGNCC | 4 cut(s) | 219, 398, 1015, 1270 |
| BmiI | GGNNCC | 6 cut(s) | 399, 415, 618, 678, 1222, 1294 |
| BmrFI | CCNGG | 2 cut(s) | 16, 1019 |
| BmrI | ACTGGG | 1 cut(s) | 1074 |
| BmsI | GCATC | 1 cut(s) | 216 |
| BmuI | ACTGGG | 1 cut(s) | 1074 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 298, 330 |
| Bpu10I | CCTNAGC | 1 cut(s) | 393 |
| BpuMI | CCSGG | 1 cut(s) | 1019 |
| BsaAI | YACGTR | 1 cut(s) | 1012 |
| BsaJI | CCNNGG | 3 cut(s) | 14, 935, 946 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1137, 1167, 1195, 1225 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 440, 761, 1024, 1283 |
| Bse1I | ACTGG | 5 cut(s) | 149, 332, 494, 522, 1069 |
| Bse3DI | GCAATG | 2 cut(s) | 379, 565 |
| BseBI | CCWGG | 1 cut(s) | 16 |
| BseDI | CCNNGG | 3 cut(s) | 14, 935, 946 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 440, 761, 1024, 1283 |
| BseMI | GCAATG | 2 cut(s) | 379, 565 |
| BseMII | CTCAG | 3 cut(s) | 584, 713, 1071 |
| BseNI | ACTGG | 5 cut(s) | 149, 332, 494, 522, 1069 |
| BseRI | GAGGAG | 2 cut(s) | 616, 1163 |
| BseXI | GCAGC | 2 cut(s) | 328, 542 |
| BseYI | CCCAGC | 1 cut(s) | 780 |
| BsgI | GTGCAG | 2 cut(s) | 252, 938 |
| BshFI | GGCC | 3 cut(s) | 400, 951, 1272 |
| BshNI | GGYRCC | 1 cut(s) | 413 |
| BsiHKAI | GWGCWC | 1 cut(s) | 667 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1267 |
| BsiSI | CCGG | 1 cut(s) | 1018 |
| BsiWI | CGTACG | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 440, 761, 1024, 1283 |
| BsmAI | GTCTC | 6 cut(s) | 573, 719, 827, 1060, 1089, 1161 |
| BsmI | GAATGC | 1 cut(s) | 456 |
| BsnI | GGCC | 3 cut(s) | 400, 951, 1272 |
| BsoBI | CYCGRG | 1 cut(s) | 1267 |
| Bsp1286I | GDGCHC | 2 cut(s) | 619, 667 |
| Bsp143I | GATC | 3 cut(s) | 194, 213, 1237 |
| Bsp19I | CCATGG | 2 cut(s) | 935, 946 |
| BspACI | CCGC | 1 cut(s) | 339 |
| BspANI | GGCC | 3 cut(s) | 400, 951, 1272 |
| BspCNI | CTCAG | 3 cut(s) | 583, 712, 1072 |
| BspLI | GGNNCC | 6 cut(s) | 399, 415, 618, 678, 1222, 1294 |
| BspMI | ACCTGC | 1 cut(s) | 1285 |
| BspQI | GCTCTTC | 1 cut(s) | 672 |
| BspT107I | GGYRCC | 1 cut(s) | 413 |
| BsrDI | GCAATG | 2 cut(s) | 379, 565 |
| BsrI | ACTGG | 5 cut(s) | 149, 332, 494, 522, 1069 |
| BssECI | CCNNGG | 3 cut(s) | 14, 935, 946 |
| BssMI | GATC | 3 cut(s) | 194, 213, 1237 |
| BssT1I | CCWWGG | 2 cut(s) | 935, 946 |
| Bst2UI | CCWGG | 1 cut(s) | 16 |
| Bst4CI | ACNGT | 4 cut(s) | 629, 642, 711, 1054 |
| Bst6I | CTCTTC | 3 cut(s) | 672, 830, 1179 |
| BstBAI | YACGTR | 1 cut(s) | 1012 |
| BstC8I | GCNNGC | 2 cut(s) | 280, 953 |
| BstDEI | CTNAG | 6 cut(s) | 191, 251, 393, 570, 699, 1080 |
| BstDSI | CCRYGG | 2 cut(s) | 935, 946 |
| BstKTI | GATC | 3 cut(s) | 197, 216, 1240 |
| BstMAI | GTCTC | 6 cut(s) | 573, 719, 827, 1060, 1089, 1161 |
| BstMBI | GATC | 3 cut(s) | 194, 213, 1237 |
| BstNI | CCWGG | 1 cut(s) | 16 |
| BstNSI | RCATGY | 1 cut(s) | 555 |
| BstSCI | CCNGG | 2 cut(s) | 14, 1017 |
| BstSFI | CTRYAG | 1 cut(s) | 1207 |
| BstV1I | GCAGC | 2 cut(s) | 328, 542 |
| BsuI | GTATCC | 1 cut(s) | 942 |
| BsuRI | GGCC | 3 cut(s) | 400, 951, 1272 |
| BtgI | CCRYGG | 2 cut(s) | 935, 946 |
| BtrI | CACGTC | 1 cut(s) | 865 |
| BveI | ACCTGC | 1 cut(s) | 1285 |
| Cac8I | GCNNGC | 2 cut(s) | 280, 953 |
| Cfr13I | GGNCC | 4 cut(s) | 219, 398, 1015, 1270 |
| CseI | GACGC | 1 cut(s) | 121 |
| Csp6I | GTAC | 5 cut(s) | 288, 448, 525, 535, 588 |
| CviAII | CATG | 5 cut(s) | 369, 552, 659, 936, 947 |
| CviQI | GTAC | 5 cut(s) | 288, 448, 525, 535, 588 |
| DdeI | CTNAG | 6 cut(s) | 191, 251, 393, 570, 699, 1080 |
| DpnI | GATC | 3 cut(s) | 196, 215, 1239 |
| DpnII | GATC | 3 cut(s) | 194, 213, 1237 |
| DraIII | CACNNNGTG | 1 cut(s) | 961 |
| Eam1104I | CTCTTC | 3 cut(s) | 672, 830, 1179 |
| EarI | CTCTTC | 3 cut(s) | 672, 830, 1179 |
| Ecl136II | GAGCTC | 1 cut(s) | 665 |
| Eco130I | CCWWGG | 2 cut(s) | 935, 946 |
| Eco24I | GRGCYC | 2 cut(s) | 619, 667 |
| Eco47I | GGWCC | 2 cut(s) | 219, 1015 |
| Eco53kI | GAGCTC | 1 cut(s) | 665 |
| Eco57I | CTGAAG | 2 cut(s) | 369, 1277 |
| Eco88I | CYCGRG | 1 cut(s) | 1267 |
| EcoICRI | GAGCTC | 1 cut(s) | 665 |
| EcoO109I | RGGNCCY | 1 cut(s) | 398 |
| EcoRI | GAATTC | 1 cut(s) | 909 |
| EcoRII | CCWGG | 1 cut(s) | 14 |
| EcoT14I | CCWWGG | 2 cut(s) | 935, 946 |
| EcoT38I | GRGCYC | 2 cut(s) | 619, 667 |
| ErhI | CCWWGG | 2 cut(s) | 935, 946 |
| FaeI | CATG | 5 cut(s) | 372, 555, 662, 939, 950 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 132, 164 |
| FatI | CATG | 5 cut(s) | 368, 551, 658, 935, 946 |
| FbaI | TGATCA | 2 cut(s) | 213, 1237 |
| Fnu4HI | GCNGC | 2 cut(s) | 342, 556 |
| FriOI | GRGCYC | 2 cut(s) | 619, 667 |
| Fsp4HI | GCNGC | 2 cut(s) | 342, 556 |
| FspBI | CTAG | 1 cut(s) | 621 |
| GluI | GCNGC | 2 cut(s) | 342, 556 |
| GsaI | CCCAGC | 1 cut(s) | 784 |
| HaeIII | GGCC | 3 cut(s) | 400, 951, 1272 |
| HapII | CCGG | 1 cut(s) | 1018 |
| HgaI | GACGC | 1 cut(s) | 121 |
| Hin1II | CATG | 5 cut(s) | 372, 555, 662, 939, 950 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HinfI | GANTC | 4 cut(s) | 566, 896, 940, 1082 |
| HpaII | CCGG | 1 cut(s) | 1018 |
| HphI | GGTGA | 4 cut(s) | 189, 575, 1174, 1298 |
| Hpy166II | GTNNAC | 1 cut(s) | 1015 |
| Hpy188I | TCNGA | 2 cut(s) | 349, 573 |
| Hpy188III | TCNNGA | 8 cut(s) | 109, 211, 217, 262, 467, 724, 1040, 1059 |
| Hpy8I | GTNNAC | 1 cut(s) | 1015 |
| HpyAV | CCTTC | 4 cut(s) | 293, 471, 606, 871 |
| HpyCH4III | ACNGT | 4 cut(s) | 629, 642, 711, 1054 |
| HpyCH4IV | ACGT | 2 cut(s) | 864, 1011 |
| HpyF3I | CTNAG | 6 cut(s) | 191, 251, 393, 570, 699, 1080 |
| HpySE526I | ACGT | 2 cut(s) | 864, 1011 |
| Hsp92II | CATG | 5 cut(s) | 372, 555, 662, 939, 950 |
| Ksp22I | TGATCA | 2 cut(s) | 213, 1237 |
| Kzo9I | GATC | 3 cut(s) | 194, 213, 1237 |
| LguI | GCTCTTC | 1 cut(s) | 672 |
| LmnI | GCTCC | 5 cut(s) | 319, 603, 622, 662, 1203 |
| Lsp1109I | GCAGC | 2 cut(s) | 328, 542 |
| LweI | GCATC | 1 cut(s) | 216 |
| MaeI | CTAG | 1 cut(s) | 621 |
| MaeII | ACGT | 2 cut(s) | 864, 1011 |
| MaeIII | GTNAC | 3 cut(s) | 161, 623, 636 |
| MalI | GATC | 3 cut(s) | 196, 215, 1239 |
| MboI | GATC | 3 cut(s) | 194, 213, 1237 |
| MboII | GAAGA | 4 cut(s) | 659, 817, 973, 1196 |
| MfeI | CAATTG | 2 cut(s) | 121, 1098 |
| MhlI | GDGCHC | 2 cut(s) | 619, 667 |
| MlyI | GAGTC | 3 cut(s) | 575, 905, 1091 |
| MmeI | TCCRAC | 1 cut(s) | 484 |
| MnlI | CCTC | 7 cut(s) | 17, 90, 177, 300, 594, 1141, 1144 |
| MroXI | GAANNNNTTC | 1 cut(s) | 735 |
| MseI | TTAA | 3 cut(s) | 80, 516, 812 |
| MslI | CAYNNNNRTG | 1 cut(s) | 42 |
| MspA1I | CMGCKG | 2 cut(s) | 341, 1235 |
| MspI | CCGG | 1 cut(s) | 1018 |
| MspR9I | CCNGG | 2 cut(s) | 16, 1019 |
| MunI | CAATTG | 2 cut(s) | 121, 1098 |
| Mva1269I | GAATGC | 1 cut(s) | 456 |
| MvaI | CCWGG | 1 cut(s) | 16 |
| NciI | CCSGG | 1 cut(s) | 1019 |
| NcoI | CCATGG | 2 cut(s) | 935, 946 |
| NdeII | GATC | 3 cut(s) | 194, 213, 1237 |
| NlaIII | CATG | 5 cut(s) | 372, 555, 662, 939, 950 |
| NlaIV | GGNNCC | 6 cut(s) | 399, 415, 618, 678, 1222, 1294 |
| NmuCI | GTSAC | 2 cut(s) | 161, 623 |
| NspI | RCATGY | 1 cut(s) | 555 |
| OliI | CACNNNNGTG | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 1 cut(s) | 672 |
| PctI | GAATGC | 1 cut(s) | 456 |
| PdmI | GAANNNNTTC | 1 cut(s) | 735 |
| PfeI | GAWTC | 1 cut(s) | 940 |
| Pfl23II | CGTACG | 1 cut(s) | 287 |
| PkrI | GCNGC | 2 cut(s) | 343, 557 |
| PleI | GAGTC | 3 cut(s) | 574, 904, 1090 |
| PpsI | GAGTC | 3 cut(s) | 574, 904, 1090 |
| Ppu21I | YACGTR | 1 cut(s) | 1012 |
| PshBI | ATTAAT | 1 cut(s) | 80 |
| PsiI | TTATAA | 2 cut(s) | 789, 1035 |
| Psp124BI | GAGCTC | 1 cut(s) | 667 |
| Psp6I | CCWGG | 1 cut(s) | 14 |
| PspFI | CCCAGC | 1 cut(s) | 780 |
| PspGI | CCWGG | 1 cut(s) | 14 |
| PspLI | CGTACG | 1 cut(s) | 287 |
| PspN4I | GGNNCC | 6 cut(s) | 399, 415, 618, 678, 1222, 1294 |
| PspPI | GGNCC | 4 cut(s) | 219, 398, 1015, 1270 |
| PvuII | CAGCTG | 1 cut(s) | 1235 |
| RsaI | GTAC | 5 cut(s) | 289, 449, 526, 536, 589 |
| RsaNI | GTAC | 5 cut(s) | 288, 448, 525, 535, 588 |
| RseI | CAYNNNNRTG | 1 cut(s) | 42 |
| SacI | GAGCTC | 1 cut(s) | 667 |
| SapI | GCTCTTC | 1 cut(s) | 672 |
| SaqAI | TTAA | 3 cut(s) | 80, 516, 812 |
| SatI | GCNGC | 2 cut(s) | 342, 556 |
| Sau3AI | GATC | 3 cut(s) | 194, 213, 1237 |
| Sau96I | GGNCC | 4 cut(s) | 219, 398, 1015, 1270 |
| SchI | GAGTC | 3 cut(s) | 575, 905, 1091 |
| ScrFI | CCNGG | 2 cut(s) | 16, 1019 |
| SduI | GDGCHC | 2 cut(s) | 619, 667 |
| SfaNI | GCATC | 1 cut(s) | 216 |
| SfcI | CTRYAG | 1 cut(s) | 1207 |
| SinI | GGWCC | 2 cut(s) | 219, 1015 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 42 |
| SsiI | CCGC | 1 cut(s) | 339 |
| SspMI | CTAG | 1 cut(s) | 621 |
| SstI | GAGCTC | 1 cut(s) | 667 |
| StyD4I | CCNGG | 2 cut(s) | 14, 1017 |
| StyI | CCWWGG | 2 cut(s) | 935, 946 |
| TaaI | ACNGT | 4 cut(s) | 629, 642, 711, 1054 |
| TaiI | ACGT | 2 cut(s) | 867, 1014 |
| TaqI | TCGA | 5 cut(s) | 95, 297, 723, 739, 1247 |
| TatI | WGTACW | 2 cut(s) | 447, 534 |
| TfiI | GAWTC | 1 cut(s) | 940 |
| Tru1I | TTAA | 3 cut(s) | 80, 516, 812 |
| Tru9I | TTAA | 3 cut(s) | 80, 516, 812 |
| TseFI | GTSAC | 2 cut(s) | 161, 623 |
| TseI | GCWGC | 2 cut(s) | 341, 555 |
| Tsp45I | GTSAC | 2 cut(s) | 161, 623 |
| TspDTI | ATGAA | 4 cut(s) | 357, 659, 890, 981 |
| VpaK11BI | GGWCC | 2 cut(s) | 219, 1015 |
| VspI | ATTAAT | 1 cut(s) | 80 |
| XapI | RAATTY | 5 cut(s) | 364, 497, 857, 909, 1178 |
| XceI | RCATGY | 1 cut(s) | 555 |
| XmnI | GAANNNNTTC | 1 cut(s) | 735 |
| XspI | CTAG | 1 cut(s) | 621 |